EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000024487 (Gene tree)
Gene ID: 101944220
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 47528 bases
Position: chrKK088201.1:2242603-2290130
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000035139	Suf	PF05843.14	1.5e-12	1	1
ENSCPBP00000035137	Suf	PF05843.14	1.7e-12	1	1
ENSCPBP00000035138	Suf	PF05843.14	1.7e-12	1	1
ENSCPBP00000035136	Suf	PF05843.14	3.5e-12	1	1
ENSCPBP00000035136	S1	PF00575.23	3.5e-48	1	2
ENSCPBP00000035136	S1	PF00575.23	3.5e-48	2	2
ENSCPBP00000035137	S1	PF00575.23	1.8e-47	1	2
ENSCPBP00000035137	S1	PF00575.23	1.8e-47	2	2
ENSCPBP00000035138	S1	PF00575.23	1.2e-46	1	2
ENSCPBP00000035138	S1	PF00575.23	1.2e-46	2	2
ENSCPBP00000035139	S1	PF00575.23	2.6e-41	1	2
ENSCPBP00000035139	S1	PF00575.23	2.6e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000041220	PDCD11-202	4935	-	ENSCPBP00000035137	1644 (aa)	-	-
ENSCPBT00000041221	PDCD11-203	4935	-	ENSCPBP00000035138	1644 (aa)	-	-
ENSCPBT00000041222	PDCD11-204	4794	-	ENSCPBP00000035139	1597 (aa)	-	-
ENSCPBT00000041219	PDCD11-201	4938	-	ENSCPBP00000035136	1645 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000024487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024487	PDCD11	99	72.727	ENSG00000148843	PDCD11	91	72.386	Homo_sapiens
ENSCPBG00000024487	PDCD11	99	42.900	ENSAPOG00000015629	pdcd11	99	42.900	Acanthochromis_polyacanthus
ENSCPBG00000024487	PDCD11	99	69.000	ENSAMEG00000017935	PDCD11	92	68.000	Ailuropoda_melanoleuca
ENSCPBG00000024487	PDCD11	54	43.016	ENSACIG00000006458	-	98	43.016	Amphilophus_citrinellus
ENSCPBG00000024487	PDCD11	99	42.666	ENSAOCG00000015287	pdcd11	99	42.368	Amphiprion_ocellaris
ENSCPBG00000024487	PDCD11	57	43.655	ENSAPEG00000020240	pdcd11	96	43.249	Amphiprion_percula
ENSCPBG00000024487	PDCD11	99	61.765	ENSATEG00000021043	pdcd11	91	61.176	Anabas_testudineus
ENSCPBG00000024487	PDCD11	100	78.873	ENSAPLG00000010301	PDCD11	91	78.873	Anas_platyrhynchos
ENSCPBG00000024487	PDCD11	99	62.341	ENSACAG00000004796	PDCD11	99	62.266	Anolis_carolinensis
ENSCPBG00000024487	PDCD11	99	75.000	ENSANAG00000034576	PDCD11	93	68.702	Aotus_nancymaae
ENSCPBG00000024487	PDCD11	90	65.580	ENSACLG00000018236	pdcd11	90	65.018	Astatotilapia_calliptera
ENSCPBG00000024487	PDCD11	99	44.706	ENSAMXG00000005458	pdcd11	91	65.614	Astyanax_mexicanus
ENSCPBG00000024487	PDCD11	99	74.857	ENSBTAG00000009715	PDCD11	90	73.639	Bos_taurus
ENSCPBG00000024487	PDCD11	99	73.789	ENSCJAG00000018257	PDCD11	93	67.602	Callithrix_jacchus
ENSCPBG00000024487	PDCD11	99	75.723	ENSCAFG00000010411	PDCD11	90	73.913	Canis_familiaris
ENSCPBG00000024487	PDCD11	99	75.723	ENSCAFG00020010369	PDCD11	90	73.913	Canis_lupus_dingo
ENSCPBG00000024487	PDCD11	99	74.571	ENSCHIG00000025218	PDCD11	90	73.066	Capra_hircus
ENSCPBG00000024487	PDCD11	97	70.930	ENSTSYG00000033423	PDCD11	91	69.006	Carlito_syrichta
ENSCPBG00000024487	PDCD11	95	72.414	ENSCAPG00000005386	PDCD11	99	52.641	Cavia_aperea
ENSCPBG00000024487	PDCD11	95	72.303	ENSCPOG00000010957	PDCD11	89	70.760	Cavia_porcellus
ENSCPBG00000024487	PDCD11	99	73.789	ENSCCAG00000018950	PDCD11	93	67.602	Cebus_capucinus
ENSCPBG00000024487	PDCD11	99	75.214	ENSCATG00000044331	PDCD11	90	74.000	Cercocebus_atys
ENSCPBG00000024487	PDCD11	99	73.639	ENSCLAG00000001029	PDCD11	91	72.414	Chinchilla_lanigera
ENSCPBG00000024487	PDCD11	99	75.214	ENSCSAG00000005346	PDCD11	90	74.000	Chlorocebus_sabaeus
ENSCPBG00000024487	PDCD11	82	81.395	ENSCHOG00000004796	PDCD11	82	81.395	Choloepus_hoffmanni
ENSCPBG00000024487	PDCD11	99	67.830	ENSCANG00000043300	PDCD11	93	66.750	Colobus_angolensis_palliatus
ENSCPBG00000024487	PDCD11	99	75.000	ENSCGRG00001006458	Pdcd11	94	74.432	Cricetulus_griseus_chok1gshd
ENSCPBG00000024487	PDCD11	99	74.716	ENSCGRG00000003583	Pdcd11	94	74.148	Cricetulus_griseus_crigri
ENSCPBG00000024487	PDCD11	97	59.868	ENSCSEG00000010739	pdcd11	92	59.672	Cynoglossus_semilaevis
ENSCPBG00000024487	PDCD11	93	64.223	ENSCVAG00000018903	pdcd11	90	63.343	Cyprinodon_variegatus
ENSCPBG00000024487	PDCD11	100	60.278	ENSDARG00000052480	pdcd11	100	45.075	Danio_rerio
ENSCPBG00000024487	PDCD11	99	75.568	ENSDNOG00000013838	PDCD11	90	73.714	Dasypus_novemcinctus
ENSCPBG00000024487	PDCD11	99	74.203	ENSDORG00000010420	Pdcd11	92	72.650	Dipodomys_ordii
ENSCPBG00000024487	PDCD11	57	35.567	FBgn0039182	CG5728	63	38.929	Drosophila_melanogaster
ENSCPBG00000024487	PDCD11	92	71.429	ENSETEG00000000813	PDCD11	84	71.429	Echinops_telfairi
ENSCPBG00000024487	PDCD11	70	37.182	ENSEBUG00000002358	-	88	37.182	Eptatretus_burgeri
ENSCPBG00000024487	PDCD11	96	75.070	ENSEASG00005015159	PDCD11	90	73.596	Equus_asinus_asinus
ENSCPBG00000024487	PDCD11	99	75.140	ENSECAG00000020507	PDCD11	90	75.070	Equus_caballus
ENSCPBG00000024487	PDCD11	88	73.219	ENSEEUG00000009245	PDCD11	81	71.920	Erinaceus_europaeus
ENSCPBG00000024487	PDCD11	99	63.372	ENSELUG00000004211	pdcd11	94	56.404	Esox_lucius
ENSCPBG00000024487	PDCD11	99	75.350	ENSFCAG00000002384	PDCD11	90	73.315	Felis_catus
ENSCPBG00000024487	PDCD11	99	84.195	ENSFALG00000008775	PDCD11	100	64.596	Ficedula_albicollis
ENSCPBG00000024487	PDCD11	99	73.011	ENSFDAG00000009532	PDCD11	91	73.295	Fukomys_damarensis
ENSCPBG00000024487	PDCD11	97	65.878	ENSFHEG00000022997	pdcd11	94	67.616	Fundulus_heteroclitus
ENSCPBG00000024487	PDCD11	92	56.433	ENSGMOG00000004186	pdcd11	86	54.971	Gadus_morhua
ENSCPBG00000024487	PDCD11	79	66.393	ENSGALG00000008265	PDCD11	92	66.121	Gallus_gallus
ENSCPBG00000024487	PDCD11	99	63.772	ENSGAFG00000012806	pdcd11	89	62.202	Gambusia_affinis
ENSCPBG00000024487	PDCD11	99	60.920	ENSGACG00000018233	pdcd11	90	60.745	Gasterosteus_aculeatus
ENSCPBG00000024487	PDCD11	95	93.539	ENSGAGG00000024314	PDCD11	100	85.749	Gopherus_agassizii
ENSCPBG00000024487	PDCD11	99	72.386	ENSGGOG00000011621	PDCD11	91	71.237	Gorilla_gorilla
ENSCPBG00000024487	PDCD11	99	61.207	ENSHBUG00000020226	pdcd11	92	60.623	Haplochromis_burtoni
ENSCPBG00000024487	PDCD11	99	73.446	ENSHGLG00000001462	PDCD11	96	70.027	Heterocephalus_glaber_female
ENSCPBG00000024487	PDCD11	99	70.339	ENSHGLG00100018779	PDCD11	91	67.030	Heterocephalus_glaber_male
ENSCPBG00000024487	PDCD11	99	63.848	ENSHCOG00000016006	pdcd11	91	63.557	Hippocampus_comes
ENSCPBG00000024487	PDCD11	68	41.096	ENSIPUG00000015102	pdcd11	99	41.226	Ictalurus_punctatus
ENSCPBG00000024487	PDCD11	99	74.716	ENSSTOG00000014553	PDCD11	93	68.112	Ictidomys_tridecemlineatus
ENSCPBG00000024487	PDCD11	99	66.339	ENSJJAG00000015523	Pdcd11	98	57.800	Jaculus_jaculus
ENSCPBG00000024487	PDCD11	55	41.957	ENSKMAG00000021182	pdcd11	98	41.342	Kryptolebias_marmoratus
ENSCPBG00000024487	PDCD11	51	41.829	ENSLBEG00000009990	-	99	41.714	Labrus_bergylta
ENSCPBG00000024487	PDCD11	100	66.471	ENSLOCG00000011818	pdcd11	93	65.889	Lepisosteus_oculatus
ENSCPBG00000024487	PDCD11	99	71.714	ENSLAFG00000008398	PDCD11	92	70.774	Loxodonta_africana
ENSCPBG00000024487	PDCD11	99	75.214	ENSMFAG00000044058	PDCD11	90	74.000	Macaca_fascicularis
ENSCPBG00000024487	PDCD11	99	75.214	ENSMMUG00000007058	PDCD11	90	74.000	Macaca_mulatta
ENSCPBG00000024487	PDCD11	99	74.929	ENSMNEG00000040726	PDCD11	90	73.714	Macaca_nemestrina
ENSCPBG00000024487	PDCD11	99	75.214	ENSMLEG00000040978	PDCD11	92	74.000	Mandrillus_leucophaeus
ENSCPBG00000024487	PDCD11	99	61.605	ENSMAMG00000009572	pdcd11	92	61.318	Mastacembelus_armatus
ENSCPBG00000024487	PDCD11	99	61.207	ENSMZEG00005008949	pdcd11	92	60.623	Maylandia_zebra
ENSCPBG00000024487	PDCD11	100	83.146	ENSMGAG00000010482	PDCD11	90	83.146	Meleagris_gallopavo
ENSCPBG00000024487	PDCD11	89	72.727	ENSMAUG00000014924	Pdcd11	89	74.148	Mesocricetus_auratus
ENSCPBG00000024487	PDCD11	99	74.713	ENSMICG00000012421	PDCD11	90	73.487	Microcebus_murinus
ENSCPBG00000024487	PDCD11	99	73.580	ENSMOCG00000021792	Pdcd11	90	73.580	Microtus_ochrogaster
ENSCPBG00000024487	PDCD11	99	57.670	ENSMMOG00000007572	pdcd11	92	56.695	Mola_mola
ENSCPBG00000024487	PDCD11	100	70.027	ENSMODG00000011077	PDCD11	90	68.564	Monodelphis_domestica
ENSCPBG00000024487	PDCD11	99	40.528	ENSMALG00000003859	pdcd11	99	40.299	Monopterus_albus
ENSCPBG00000024487	PDCD11	99	74.644	MGP_CAROLIEiJ_G0023050	Pdcd11	91	73.143	Mus_caroli
ENSCPBG00000024487	PDCD11	99	74.929	ENSMUSG00000025047	Pdcd11	91	73.429	Mus_musculus
ENSCPBG00000024487	PDCD11	99	73.011	MGP_PahariEiJ_G0014540	Pdcd11	91	73.011	Mus_pahari
ENSCPBG00000024487	PDCD11	99	74.644	MGP_SPRETEiJ_G0023971	Pdcd11	91	73.143	Mus_spretus
ENSCPBG00000024487	PDCD11	99	73.389	ENSMPUG00000016829	PDCD11	90	74.510	Mustela_putorius_furo
ENSCPBG00000024487	PDCD11	99	74.510	ENSMLUG00000004997	PDCD11	96	68.514	Myotis_lucifugus
ENSCPBG00000024487	PDCD11	99	74.000	ENSNGAG00000018143	Pdcd11	90	72.779	Nannospalax_galili
ENSCPBG00000024487	PDCD11	95	40.704	ENSNBRG00000021596	pdcd11	97	41.549	Neolamprologus_brichardi
ENSCPBG00000024487	PDCD11	99	71.850	ENSNLEG00000026700	PDCD11	91	70.699	Nomascus_leucogenys
ENSCPBG00000024487	PDCD11	65	78.509	ENSMEUG00000013719	-	58	78.509	Notamacropus_eugenii
ENSCPBG00000024487	PDCD11	99	73.352	ENSOPRG00000010593	PDCD11	90	72.046	Ochotona_princeps
ENSCPBG00000024487	PDCD11	99	71.307	ENSODEG00000008079	PDCD11	90	70.170	Octodon_degus
ENSCPBG00000024487	PDCD11	99	61.243	ENSONIG00000018835	pdcd11	92	59.773	Oreochromis_niloticus
ENSCPBG00000024487	PDCD11	99	70.123	ENSOANG00000001636	-	95	70.936	Ornithorhynchus_anatinus
ENSCPBG00000024487	PDCD11	99	74.785	ENSOCUG00000006312	PDCD11	90	74.785	Oryctolagus_cuniculus
ENSCPBG00000024487	PDCD11	52	43.318	ENSORLG00000012995	pdcd11	94	43.433	Oryzias_latipes
ENSCPBG00000024487	PDCD11	100	61.932	ENSORLG00020003642	pdcd11	92	61.932	Oryzias_latipes_hni
ENSCPBG00000024487	PDCD11	100	62.216	ENSORLG00015001618	pdcd11	97	62.216	Oryzias_latipes_hsok
ENSCPBG00000024487	PDCD11	67	63.218	ENSOMEG00000010904	pdcd11	95	62.216	Oryzias_melastigma
ENSCPBG00000024487	PDCD11	99	74.644	ENSOGAG00000008683	PDCD11	90	73.429	Otolemur_garnettii
ENSCPBG00000024487	PDCD11	99	74.286	ENSOARG00000003719	PDCD11	90	72.779	Ovis_aries
ENSCPBG00000024487	PDCD11	99	72.386	ENSPPAG00000024593	PDCD11	91	72.386	Pan_paniscus
ENSCPBG00000024487	PDCD11	99	75.140	ENSPPRG00000015133	PDCD11	90	73.109	Panthera_pardus
ENSCPBG00000024487	PDCD11	99	75.350	ENSPTIG00000011433	PDCD11	90	73.315	Panthera_tigris_altaica
ENSCPBG00000024487	PDCD11	99	72.118	ENSPTRG00000002911	PDCD11	91	72.118	Pan_troglodytes
ENSCPBG00000024487	PDCD11	99	70.229	ENSPANG00000020959	PDCD11	92	69.133	Papio_anubis
ENSCPBG00000024487	PDCD11	99	65.774	ENSPKIG00000000973	pdcd11	92	65.103	Paramormyrops_kingsleyae
ENSCPBG00000024487	PDCD11	79	81.674	ENSPSIG00000005102	PDCD11	88	81.674	Pelodiscus_sinensis
ENSCPBG00000024487	PDCD11	75	63.907	ENSPMGG00000007289	pdcd11	88	64.808	Periophthalmus_magnuspinnatus
ENSCPBG00000024487	PDCD11	99	74.425	ENSPEMG00000010315	Pdcd11	90	75.000	Peromyscus_maniculatus_bairdii
ENSCPBG00000024487	PDCD11	99	60.556	ENSPMAG00000003098	pdcd11	91	60.556	Petromyzon_marinus
ENSCPBG00000024487	PDCD11	99	76.012	ENSPCIG00000001118	PDCD11	90	75.000	Phascolarctos_cinereus
ENSCPBG00000024487	PDCD11	99	62.286	ENSPFOG00000006012	pdcd11	94	58.974	Poecilia_formosa
ENSCPBG00000024487	PDCD11	99	63.988	ENSPLAG00000014494	pdcd11	91	63.798	Poecilia_latipinna
ENSCPBG00000024487	PDCD11	96	64.286	ENSPMEG00000018177	pdcd11	94	56.188	Poecilia_mexicana
ENSCPBG00000024487	PDCD11	99	63.988	ENSPREG00000000475	pdcd11	93	60.647	Poecilia_reticulata
ENSCPBG00000024487	PDCD11	99	72.118	ENSPPYG00000002621	PDCD11	91	70.968	Pongo_abelii
ENSCPBG00000024487	PDCD11	68	74.212	ENSPCAG00000011663	PDCD11	56	72.989	Procavia_capensis
ENSCPBG00000024487	PDCD11	89	74.286	ENSPCOG00000023327	PDCD11	89	73.066	Propithecus_coquereli
ENSCPBG00000024487	PDCD11	99	74.644	ENSPVAG00000004176	PDCD11	90	74.644	Pteropus_vampyrus
ENSCPBG00000024487	PDCD11	99	61.207	ENSPNYG00000003979	pdcd11	92	60.623	Pundamilia_nyererei
ENSCPBG00000024487	PDCD11	97	62.573	ENSPNAG00000017225	pdcd11	100	43.407	Pygocentrus_nattereri
ENSCPBG00000024487	PDCD11	99	73.315	ENSRNOG00000020304	Pdcd11	94	72.113	Rattus_norvegicus
ENSCPBG00000024487	PDCD11	99	74.644	ENSRBIG00000011889	PDCD11	90	73.429	Rhinopithecus_bieti
ENSCPBG00000024487	PDCD11	99	74.929	ENSRROG00000030483	PDCD11	90	73.714	Rhinopithecus_roxellana
ENSCPBG00000024487	PDCD11	99	34.676	YMR229C	-	98	34.326	Saccharomyces_cerevisiae
ENSCPBG00000024487	PDCD11	99	74.644	ENSSBOG00000030308	PDCD11	91	70.924	Saimiri_boliviensis_boliviensis
ENSCPBG00000024487	PDCD11	100	72.778	ENSSHAG00000018258	PDCD11	91	72.778	Sarcophilus_harrisii
ENSCPBG00000024487	PDCD11	99	65.527	ENSSFOG00015003881	pdcd11	92	65.517	Scleropages_formosus
ENSCPBG00000024487	PDCD11	99	62.647	ENSSMAG00000006612	pdcd11	91	62.059	Scophthalmus_maximus
ENSCPBG00000024487	PDCD11	96	63.450	ENSSDUG00000021302	pdcd11	92	64.012	Seriola_dumerili
ENSCPBG00000024487	PDCD11	52	44.381	ENSSLDG00000010228	pdcd11	98	42.481	Seriola_lalandi_dorsalis
ENSCPBG00000024487	PDCD11	73	74.545	ENSSARG00000002540	PDCD11	62	74.545	Sorex_araneus
ENSCPBG00000024487	PDCD11	97	61.149	ENSSPAG00000017558	pdcd11	93	60.269	Stegastes_partitus
ENSCPBG00000024487	PDCD11	99	75.783	ENSSSCG00000010599	PDCD11	90	74.571	Sus_scrofa
ENSCPBG00000024487	PDCD11	76	41.839	ENSTRUG00000014291	pdcd11	99	41.609	Takifugu_rubripes
ENSCPBG00000024487	PDCD11	99	63.636	ENSTNIG00000012085	pdcd11	90	63.636	Tetraodon_nigroviridis
ENSCPBG00000024487	PDCD11	99	73.926	ENSTBEG00000001893	PDCD11	90	72.701	Tupaia_belangeri
ENSCPBG00000024487	PDCD11	97	78.758	ENSTTRG00000003356	PDCD11	87	79.861	Tursiops_truncatus
ENSCPBG00000024487	PDCD11	99	75.931	ENSUAMG00000018015	PDCD11	92	70.889	Ursus_americanus
ENSCPBG00000024487	PDCD11	99	75.931	ENSUMAG00000023567	PDCD11	91	71.935	Ursus_maritimus
ENSCPBG00000024487	PDCD11	71	57.463	ENSVPAG00000007405	PDCD11	71	57.463	Vicugna_pacos
ENSCPBG00000024487	PDCD11	99	75.358	ENSVVUG00000004457	PDCD11	92	73.276	Vulpes_vulpes
ENSCPBG00000024487	PDCD11	99	74.857	ENSXETG00000009482	pdcd11	93	66.585	Xenopus_tropicalis
ENSCPBG00000024487	PDCD11	96	49.401	ENSXCOG00000012420	pdcd11	90	48.955	Xiphophorus_couchianus
ENSCPBG00000024487	PDCD11	99	63.988	ENSXMAG00000004638	pdcd11	93	60.490	Xiphophorus_maculatus