EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000024757 (Gene tree)
Gene ID: 101950519
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 111092 bases
Position: chrKK088219.1:2271592-2382683
Accession: 10790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000035564	DRY_EERY	PF09750.9	3.6e-33	1	1
ENSCPBP00000035563	DRY_EERY	PF09750.9	3.7e-33	1	1
ENSCPBP00000035561	DRY_EERY	PF09750.9	3.8e-33	1	1
ENSCPBP00000035564	Surp	PF01805.20	1.3e-26	1	2
ENSCPBP00000035564	Surp	PF01805.20	1.3e-26	2	2
ENSCPBP00000035563	Surp	PF01805.20	1.4e-26	1	2
ENSCPBP00000035563	Surp	PF01805.20	1.4e-26	2	2
ENSCPBP00000035561	Surp	PF01805.20	1.5e-26	1	2
ENSCPBP00000035561	Surp	PF01805.20	1.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000041709	SFSWAP-203	3501	XM_008163472	ENSCPBP00000035564	985 (aa)	XP_008161694	UPI00046C201A
ENSCPBT00000041708	SFSWAP-202	3585	XM_008163471	ENSCPBP00000035563	1013 (aa)	XP_008161693	UPI00046C1B3F
ENSCPBT00000041706	SFSWAP-201	3657	XM_005299538	ENSCPBP00000035561	1037 (aa)	XP_005299595	UPI000388A518

Gene Model

Click here to download ENSCPBG00000024757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024757's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024757	SFSWAP	96	78.535	ENSG00000061936	SFSWAP	98	79.412	Homo_sapiens
ENSCPBG00000024757	SFSWAP	70	59.175	ENSAPOG00000005784	sfswap	88	59.581	Acanthochromis_polyacanthus
ENSCPBG00000024757	SFSWAP	100	72.340	ENSAMEG00000013818	SFSWAP	100	70.997	Ailuropoda_melanoleuca
ENSCPBG00000024757	SFSWAP	70	58.392	ENSAOCG00000016469	sfswap	69	60.511	Amphiprion_ocellaris
ENSCPBG00000024757	SFSWAP	70	59.291	ENSAPEG00000004965	sfswap	69	60.511	Amphiprion_percula
ENSCPBG00000024757	SFSWAP	69	60.485	ENSATEG00000021053	sfswap	85	59.914	Anabas_testudineus
ENSCPBG00000024757	SFSWAP	93	75.847	ENSACAG00000007220	SFSWAP	100	75.738	Anolis_carolinensis
ENSCPBG00000024757	SFSWAP	96	77.857	ENSANAG00000001518	SFSWAP	100	74.732	Aotus_nancymaae
ENSCPBG00000024757	SFSWAP	77	60.169	ENSACLG00000020159	sfswap	83	59.463	Astatotilapia_calliptera
ENSCPBG00000024757	SFSWAP	73	57.455	ENSAMXG00000008657	sfswap	98	55.080	Astyanax_mexicanus
ENSCPBG00000024757	SFSWAP	100	76.280	ENSBTAG00000000439	SFSWAP	100	75.212	Bos_taurus
ENSCPBG00000024757	SFSWAP	96	76.366	ENSCJAG00000003613	SFSWAP	100	74.334	Callithrix_jacchus
ENSCPBG00000024757	SFSWAP	100	74.696	ENSCAFG00000006625	SFSWAP	100	73.541	Canis_familiaris
ENSCPBG00000024757	SFSWAP	86	68.198	ENSCAFG00020011254	SFSWAP	99	67.654	Canis_lupus_dingo
ENSCPBG00000024757	SFSWAP	100	75.000	ENSCHIG00000008838	SFSWAP	100	75.197	Capra_hircus
ENSCPBG00000024757	SFSWAP	96	78.163	ENSCATG00000031094	SFSWAP	100	75.317	Cercocebus_atys
ENSCPBG00000024757	SFSWAP	98	74.949	ENSCLAG00000008380	SFSWAP	100	73.521	Chinchilla_lanigera
ENSCPBG00000024757	SFSWAP	96	77.521	ENSCSAG00000001884	SFSWAP	100	74.624	Chlorocebus_sabaeus
ENSCPBG00000024757	SFSWAP	92	65.419	ENSCHOG00000003578	SFSWAP	99	67.255	Choloepus_hoffmanni
ENSCPBG00000024757	SFSWAP	96	78.061	ENSCANG00000036501	SFSWAP	100	75.220	Colobus_angolensis_palliatus
ENSCPBG00000024757	SFSWAP	75	60.317	ENSCSEG00000003773	sfswap	68	61.272	Cynoglossus_semilaevis
ENSCPBG00000024757	SFSWAP	51	45.541	ENSCVAG00000001205	-	97	46.325	Cyprinodon_variegatus
ENSCPBG00000024757	SFSWAP	69	62.011	ENSDARG00000005980	sfswap	97	56.193	Danio_rerio
ENSCPBG00000024757	SFSWAP	81	74.534	ENSDNOG00000018742	SFSWAP	99	75.734	Dasypus_novemcinctus
ENSCPBG00000024757	SFSWAP	96	68.980	ENSDORG00000010352	Sfswap	99	67.928	Dipodomys_ordii
ENSCPBG00000024757	SFSWAP	62	36.316	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSCPBG00000024757	SFSWAP	77	83.333	ENSETEG00000016657	-	86	83.333	Echinops_telfairi
ENSCPBG00000024757	SFSWAP	83	36.364	ENSEBUG00000016748	SFSWAP	99	34.171	Eptatretus_burgeri
ENSCPBG00000024757	SFSWAP	96	78.813	ENSEASG00005016502	SFSWAP	100	75.636	Equus_asinus_asinus
ENSCPBG00000024757	SFSWAP	96	78.710	ENSECAG00000007657	SFSWAP	100	75.538	Equus_caballus
ENSCPBG00000024757	SFSWAP	86	61.955	ENSEEUG00000001713	SFSWAP	99	61.294	Erinaceus_europaeus
ENSCPBG00000024757	SFSWAP	96	51.917	ENSELUG00000010942	sfswap	97	52.246	Esox_lucius
ENSCPBG00000024757	SFSWAP	100	75.101	ENSFCAG00000010778	SFSWAP	100	73.843	Felis_catus
ENSCPBG00000024757	SFSWAP	100	83.585	ENSFALG00000009577	SFSWAP	100	83.585	Ficedula_albicollis
ENSCPBG00000024757	SFSWAP	98	73.374	ENSFDAG00000017235	SFSWAP	100	72.128	Fukomys_damarensis
ENSCPBG00000024757	SFSWAP	78	60.142	ENSGAFG00000006272	sfswap	97	54.555	Gambusia_affinis
ENSCPBG00000024757	SFSWAP	75	61.111	ENSGACG00000017647	sfswap	98	57.163	Gasterosteus_aculeatus
ENSCPBG00000024757	SFSWAP	100	97.589	ENSGAGG00000002611	SFSWAP	100	97.589	Gopherus_agassizii
ENSCPBG00000024757	SFSWAP	96	78.433	ENSGGOG00000014877	SFSWAP	100	75.681	Gorilla_gorilla
ENSCPBG00000024757	SFSWAP	86	60.169	ENSHBUG00000005629	sfswap	83	58.898	Haplochromis_burtoni
ENSCPBG00000024757	SFSWAP	52	78.133	ENSHGLG00000019216	SFSWAP	100	72.618	Heterocephalus_glaber_female
ENSCPBG00000024757	SFSWAP	52	76.904	ENSHGLG00100019350	SFSWAP	100	72.400	Heterocephalus_glaber_male
ENSCPBG00000024757	SFSWAP	70	70.455	ENSHCOG00000009475	sfswap	69	57.593	Hippocampus_comes
ENSCPBG00000024757	SFSWAP	97	54.900	ENSIPUG00000010598	sfswap	98	55.657	Ictalurus_punctatus
ENSCPBG00000024757	SFSWAP	98	74.312	ENSSTOG00000000773	SFSWAP	100	74.096	Ictidomys_tridecemlineatus
ENSCPBG00000024757	SFSWAP	96	75.553	ENSJJAG00000006609	Sfswap	97	74.289	Jaculus_jaculus
ENSCPBG00000024757	SFSWAP	70	58.020	ENSKMAG00000013168	sfswap	69	59.831	Kryptolebias_marmoratus
ENSCPBG00000024757	SFSWAP	70	57.725	ENSLBEG00000010239	sfswap	73	58.865	Labrus_bergylta
ENSCPBG00000024757	SFSWAP	99	61.895	ENSLACG00000018678	SFSWAP	96	63.845	Latimeria_chalumnae
ENSCPBG00000024757	SFSWAP	96	78.163	ENSMFAG00000037352	SFSWAP	100	75.317	Macaca_fascicularis
ENSCPBG00000024757	SFSWAP	96	77.731	ENSMMUG00000020343	SFSWAP	100	74.824	Macaca_mulatta
ENSCPBG00000024757	SFSWAP	96	78.265	ENSMNEG00000041002	SFSWAP	100	75.415	Macaca_nemestrina
ENSCPBG00000024757	SFSWAP	96	76.180	ENSMLEG00000035728	SFSWAP	100	72.946	Mandrillus_leucophaeus
ENSCPBG00000024757	SFSWAP	95	52.663	ENSMAMG00000006631	sfswap	97	53.955	Mastacembelus_armatus
ENSCPBG00000024757	SFSWAP	70	60.169	ENSMZEG00005017834	SFSWAP	83	59.463	Maylandia_zebra
ENSCPBG00000024757	SFSWAP	96	86.063	ENSMGAG00000002191	SFSWAP	97	86.253	Meleagris_gallopavo
ENSCPBG00000024757	SFSWAP	96	72.345	ENSMODG00000015581	SFSWAP	94	69.433	Monodelphis_domestica
ENSCPBG00000024757	SFSWAP	67	59.772	ENSMALG00000012603	sfswap	97	54.678	Monopterus_albus
ENSCPBG00000024757	SFSWAP	100	75.304	ENSMPUG00000002218	SFSWAP	100	74.346	Mustela_putorius_furo
ENSCPBG00000024757	SFSWAP	90	68.026	ENSMLUG00000011296	SFSWAP	100	86.667	Myotis_lucifugus
ENSCPBG00000024757	SFSWAP	75	57.903	ENSNBRG00000020857	sfswap	69	57.589	Neolamprologus_brichardi
ENSCPBG00000024757	SFSWAP	96	75.356	ENSNLEG00000008386	SFSWAP	100	73.028	Nomascus_leucogenys
ENSCPBG00000024757	SFSWAP	71	77.333	ENSMEUG00000009556	-	79	74.048	Notamacropus_eugenii
ENSCPBG00000024757	SFSWAP	95	74.224	ENSOPRG00000006983	-	90	72.385	Ochotona_princeps
ENSCPBG00000024757	SFSWAP	95	53.313	ENSONIG00000003757	sfswap	99	52.758	Oreochromis_niloticus
ENSCPBG00000024757	SFSWAP	52	76.699	ENSOANG00000013861	SFSWAP	100	79.493	Ornithorhynchus_anatinus
ENSCPBG00000024757	SFSWAP	80	59.065	ENSORLG00000010983	sfswap	97	52.294	Oryzias_latipes
ENSCPBG00000024757	SFSWAP	80	58.924	ENSORLG00020010779	sfswap	97	52.192	Oryzias_latipes_hni
ENSCPBG00000024757	SFSWAP	80	58.782	ENSORLG00015023093	sfswap	97	52.192	Oryzias_latipes_hsok
ENSCPBG00000024757	SFSWAP	70	59.327	ENSOMEG00000022065	sfswap	97	53.462	Oryzias_melastigma
ENSCPBG00000024757	SFSWAP	100	75.540	ENSOARG00000014314	SFSWAP	100	74.558	Ovis_aries
ENSCPBG00000024757	SFSWAP	96	78.739	ENSPPAG00000036706	SFSWAP	100	75.908	Pan_paniscus
ENSCPBG00000024757	SFSWAP	100	71.988	ENSPPRG00000017318	SFSWAP	100	70.254	Panthera_pardus
ENSCPBG00000024757	SFSWAP	94	66.774	ENSPTIG00000004304	SFSWAP	99	63.673	Panthera_tigris_altaica
ENSCPBG00000024757	SFSWAP	96	78.739	ENSPTRG00000005640	SFSWAP	100	76.029	Pan_troglodytes
ENSCPBG00000024757	SFSWAP	96	78.163	ENSPANG00000019737	SFSWAP	100	75.317	Papio_anubis
ENSCPBG00000024757	SFSWAP	70	60.649	ENSPKIG00000008327	sfswap	97	52.266	Paramormyrops_kingsleyae
ENSCPBG00000024757	SFSWAP	62	91.956	ENSPSIG00000017807	SFSWAP	100	93.375	Pelodiscus_sinensis
ENSCPBG00000024757	SFSWAP	96	76.049	ENSPCIG00000006062	SFSWAP	100	72.596	Phascolarctos_cinereus
ENSCPBG00000024757	SFSWAP	82	58.824	ENSPFOG00000019657	sfswap	97	54.611	Poecilia_formosa
ENSCPBG00000024757	SFSWAP	82	58.824	ENSPLAG00000008513	sfswap	97	54.611	Poecilia_latipinna
ENSCPBG00000024757	SFSWAP	82	58.824	ENSPMEG00000008716	sfswap	97	54.819	Poecilia_mexicana
ENSCPBG00000024757	SFSWAP	81	58.543	ENSPREG00000006692	sfswap	97	54.657	Poecilia_reticulata
ENSCPBG00000024757	SFSWAP	96	75.742	ENSPPYG00000005129	SFSWAP	100	74.033	Pongo_abelii
ENSCPBG00000024757	SFSWAP	53	87.097	ENSPCAG00000004977	-	65	86.667	Procavia_capensis
ENSCPBG00000024757	SFSWAP	89	75.636	ENSPVAG00000014918	SFSWAP	92	72.559	Pteropus_vampyrus
ENSCPBG00000024757	SFSWAP	86	60.169	ENSPNYG00000012660	sfswap	82	59.463	Pundamilia_nyererei
ENSCPBG00000024757	SFSWAP	85	56.051	ENSPNAG00000007073	sfswap	98	52.312	Pygocentrus_nattereri
ENSCPBG00000024757	SFSWAP	96	72.584	ENSRBIG00000036330	SFSWAP	100	68.924	Rhinopithecus_bieti
ENSCPBG00000024757	SFSWAP	96	77.857	ENSRROG00000032001	SFSWAP	100	75.024	Rhinopithecus_roxellana
ENSCPBG00000024757	SFSWAP	96	75.510	ENSSBOG00000026217	SFSWAP	100	75.126	Saimiri_boliviensis_boliviensis
ENSCPBG00000024757	SFSWAP	92	77.522	ENSSHAG00000014232	SFSWAP	100	77.462	Sarcophilus_harrisii
ENSCPBG00000024757	SFSWAP	95	58.021	ENSSFOG00015000766	sfswap	97	54.289	Scleropages_formosus
ENSCPBG00000024757	SFSWAP	69	58.567	ENSSMAG00000018718	sfswap	70	55.911	Scophthalmus_maximus
ENSCPBG00000024757	SFSWAP	70	59.803	ENSSDUG00000021680	sfswap	68	57.465	Seriola_dumerili
ENSCPBG00000024757	SFSWAP	70	59.577	ENSSLDG00000010835	sfswap	82	57.606	Seriola_lalandi_dorsalis
ENSCPBG00000024757	SFSWAP	76	81.373	ENSSARG00000000424	SFSWAP	85	81.373	Sorex_araneus
ENSCPBG00000024757	SFSWAP	86	79.157	ENSSPUG00000010272	SFSWAP	99	79.270	Sphenodon_punctatus
ENSCPBG00000024757	SFSWAP	70	59.943	ENSSPAG00000014310	sfswap	83	58.949	Stegastes_partitus
ENSCPBG00000024757	SFSWAP	100	74.419	ENSSSCG00000009744	SFSWAP	100	74.372	Sus_scrofa
ENSCPBG00000024757	SFSWAP	96	84.089	ENSTGUG00000004623	SFSWAP	99	84.299	Taeniopygia_guttata
ENSCPBG00000024757	SFSWAP	52	81.250	ENSTBEG00000004983	-	66	83.333	Tupaia_belangeri
ENSCPBG00000024757	SFSWAP	92	78.520	ENSTTRG00000013478	SFSWAP	99	68.886	Tursiops_truncatus
ENSCPBG00000024757	SFSWAP	100	72.746	ENSUAMG00000016807	SFSWAP	100	70.493	Ursus_americanus
ENSCPBG00000024757	SFSWAP	91	67.746	ENSUMAG00000002957	SFSWAP	94	65.410	Ursus_maritimus
ENSCPBG00000024757	SFSWAP	55	77.778	ENSVPAG00000010479	-	74	77.778	Vicugna_pacos
ENSCPBG00000024757	SFSWAP	96	75.844	ENSVVUG00000010753	SFSWAP	100	73.212	Vulpes_vulpes
ENSCPBG00000024757	SFSWAP	96	60.505	ENSXETG00000009350	sfswap	93	66.109	Xenopus_tropicalis
ENSCPBG00000024757	SFSWAP	78	59.915	ENSXMAG00000009020	sfswap	97	54.806	Xiphophorus_maculatus