EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000024905 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 52683 bases
Position: chrKK082946.1:4431566-4484248
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000035817	zf-U11-48K	PF05253.12	1.1e-18	1	2
ENSCPBP00000035817	zf-U11-48K	PF05253.12	1.1e-18	2	2
ENSCPBP00000035818	zf-U11-48K	PF05253.12	1.2e-18	1	2
ENSCPBP00000035818	zf-U11-48K	PF05253.12	1.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000042007	-	516	-	ENSCPBP00000035818	171 (aa)	-	-
ENSCPBT00000042006	-	501	-	ENSCPBP00000035817	166 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000024905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000024905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000024905	-	85	72.785	ENSCPBG00000005134	-	69	72.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000024905	-	86	58.125	ENSG00000170627	GTSF1	95	58.125	Homo_sapiens
ENSCPBG00000024905	-	81	41.667	ENSAPOG00000022724	-	95	41.667	Acanthochromis_polyacanthus
ENSCPBG00000024905	-	86	59.375	ENSAMEG00000000939	GTSF1	95	59.375	Ailuropoda_melanoleuca
ENSCPBG00000024905	-	81	43.448	ENSAOCG00000022214	-	69	43.448	Amphiprion_ocellaris
ENSCPBG00000024905	-	64	64.151	ENSAPLG00000004814	GTSF1	84	60.714	Anas_platyrhynchos
ENSCPBG00000024905	-	61	52.941	ENSACAG00000029590	-	81	52.941	Anolis_carolinensis
ENSCPBG00000024905	-	87	53.416	ENSACAG00000014260	-	94	53.416	Anolis_carolinensis
ENSCPBG00000024905	-	86	57.500	ENSANAG00000024529	GTSF1	95	57.500	Aotus_nancymaae
ENSCPBG00000024905	-	87	59.006	ENSBTAG00000018085	GTSF1	96	59.006	Bos_taurus
ENSCPBG00000024905	-	86	57.962	ENSCJAG00000018968	-	95	57.500	Callithrix_jacchus
ENSCPBG00000024905	-	86	55.000	ENSCJAG00000039915	-	84	55.000	Callithrix_jacchus
ENSCPBG00000024905	-	86	60.000	ENSCAFG00000006465	-	95	60.000	Canis_familiaris
ENSCPBG00000024905	-	86	60.000	ENSCAFG00020020373	-	90	59.236	Canis_lupus_dingo
ENSCPBG00000024905	-	87	57.764	ENSCHIG00000012215	-	94	57.764	Capra_hircus
ENSCPBG00000024905	-	88	48.125	ENSTSYG00000035266	-	97	48.125	Carlito_syrichta
ENSCPBG00000024905	-	85	61.006	ENSTSYG00000004679	-	95	61.006	Carlito_syrichta
ENSCPBG00000024905	-	86	61.250	ENSCPOG00000008743	GTSF1	95	61.250	Cavia_porcellus
ENSCPBG00000024905	-	86	55.556	ENSCCAG00000032808	GTSF1	99	53.947	Cebus_capucinus
ENSCPBG00000024905	-	91	57.831	ENSCATG00000036328	GTSF1	95	58.125	Cercocebus_atys
ENSCPBG00000024905	-	86	61.250	ENSCLAG00000012811	GTSF1	95	60.000	Chinchilla_lanigera
ENSCPBG00000024905	-	86	58.599	ENSCSAG00000005394	GTSF1	98	58.599	Chlorocebus_sabaeus
ENSCPBG00000024905	-	86	60.000	ENSCHOG00000001659	GTSF1	96	60.000	Choloepus_hoffmanni
ENSCPBG00000024905	-	91	57.229	ENSCANG00000033118	GTSF1	95	58.125	Colobus_angolensis_palliatus
ENSCPBG00000024905	-	86	53.750	ENSCANG00000031776	-	95	53.750	Colobus_angolensis_palliatus
ENSCPBG00000024905	-	86	58.750	ENSCGRG00001013814	Gtsf1	95	58.750	Cricetulus_griseus_chok1gshd
ENSCPBG00000024905	-	86	58.750	ENSCGRG00000007733	Gtsf1	95	58.750	Cricetulus_griseus_crigri
ENSCPBG00000024905	-	94	54.913	ENSDNOG00000001438	-	85	54.913	Dasypus_novemcinctus
ENSCPBG00000024905	-	86	59.375	ENSDORG00000003228	Gtsf1	95	59.375	Dipodomys_ordii
ENSCPBG00000024905	-	86	58.491	ENSETEG00000009310	GTSF1	95	58.491	Echinops_telfairi
ENSCPBG00000024905	-	90	59.880	ENSEASG00005010260	GTSF1	89	59.880	Equus_asinus_asinus
ENSCPBG00000024905	-	90	59.880	ENSECAG00000013618	GTSF1	99	59.880	Equus_caballus
ENSCPBG00000024905	-	86	60.625	ENSEEUG00000005185	GTSF1	95	60.625	Erinaceus_europaeus
ENSCPBG00000024905	-	91	41.566	ENSFCAG00000023672	-	91	41.566	Felis_catus
ENSCPBG00000024905	-	86	60.000	ENSFCAG00000010156	-	95	60.000	Felis_catus
ENSCPBG00000024905	-	69	54.386	ENSFALG00000007613	-	90	54.386	Ficedula_albicollis
ENSCPBG00000024905	-	86	60.625	ENSFDAG00000009383	GTSF1	95	60.625	Fukomys_damarensis
ENSCPBG00000024905	-	84	50.993	ENSGALG00000001109	GTSF1	94	52.000	Gallus_gallus
ENSCPBG00000024905	-	80	43.151	ENSGACG00000010783	-	80	43.151	Gasterosteus_aculeatus
ENSCPBG00000024905	-	63	62.963	ENSGAGG00000016342	-	98	62.963	Gopherus_agassizii
ENSCPBG00000024905	-	88	71.605	ENSGAGG00000011062	GTSF1	85	71.605	Gopherus_agassizii
ENSCPBG00000024905	-	86	58.125	ENSGGOG00000016063	GTSF1	95	58.125	Gorilla_gorilla
ENSCPBG00000024905	-	86	58.750	ENSHGLG00000002436	GTSF1	95	58.750	Heterocephalus_glaber_female
ENSCPBG00000024905	-	86	58.750	ENSHGLG00100017301	GTSF1	95	58.750	Heterocephalus_glaber_male
ENSCPBG00000024905	-	83	39.610	ENSIPUG00000002483	-	83	39.610	Ictalurus_punctatus
ENSCPBG00000024905	-	86	59.375	ENSSTOG00000025170	GTSF1	95	59.375	Ictidomys_tridecemlineatus
ENSCPBG00000024905	-	86	56.051	ENSJJAG00000017442	-	100	55.625	Jaculus_jaculus
ENSCPBG00000024905	-	86	59.494	ENSJJAG00000003323	-	96	59.494	Jaculus_jaculus
ENSCPBG00000024905	-	81	42.759	ENSKMAG00000006038	-	80	42.759	Kryptolebias_marmoratus
ENSCPBG00000024905	-	89	52.147	ENSLACG00000008870	GTSF1	82	52.147	Latimeria_chalumnae
ENSCPBG00000024905	-	86	60.000	ENSLAFG00000016318	GTSF1	95	60.000	Loxodonta_africana
ENSCPBG00000024905	-	86	58.125	ENSMFAG00000041178	GTSF1	95	58.125	Macaca_fascicularis
ENSCPBG00000024905	-	86	58.125	ENSMMUG00000003758	GTSF1	95	58.125	Macaca_mulatta
ENSCPBG00000024905	-	86	58.125	ENSMNEG00000036779	GTSF1	95	58.125	Macaca_nemestrina
ENSCPBG00000024905	-	91	57.831	ENSMLEG00000028375	GTSF1	95	58.125	Mandrillus_leucophaeus
ENSCPBG00000024905	-	63	61.905	ENSMGAG00000000685	GTSF1	79	58.182	Meleagris_gallopavo
ENSCPBG00000024905	-	86	40.127	ENSMAUG00000018746	Gtsf1	93	40.127	Mesocricetus_auratus
ENSCPBG00000024905	-	86	60.625	ENSMICG00000008444	-	95	60.625	Microcebus_murinus
ENSCPBG00000024905	-	86	59.494	ENSMOCG00000018889	Gtsf1	95	58.750	Microtus_ochrogaster
ENSCPBG00000024905	-	86	62.500	ENSMODG00000019422	GTSF1	95	62.500	Monodelphis_domestica
ENSCPBG00000024905	-	86	60.625	MGP_CAROLIEiJ_G0020379	Gtsf1	95	61.039	Mus_caroli
ENSCPBG00000024905	-	86	60.625	ENSMUSG00000022487	Gtsf1	95	61.039	Mus_musculus
ENSCPBG00000024905	-	86	61.250	MGP_PahariEiJ_G0020378	Gtsf1	95	61.688	Mus_pahari
ENSCPBG00000024905	-	86	60.625	MGP_SPRETEiJ_G0021272	Gtsf1	95	61.039	Mus_spretus
ENSCPBG00000024905	-	90	56.627	ENSMPUG00000019140	-	99	56.627	Mustela_putorius_furo
ENSCPBG00000024905	-	86	60.000	ENSMPUG00000005669	-	95	60.000	Mustela_putorius_furo
ENSCPBG00000024905	-	86	58.750	ENSMPUG00000019323	-	95	58.750	Mustela_putorius_furo
ENSCPBG00000024905	-	86	59.375	ENSMLUG00000026557	-	95	59.375	Myotis_lucifugus
ENSCPBG00000024905	-	86	60.000	ENSMLUG00000012961	-	95	60.000	Myotis_lucifugus
ENSCPBG00000024905	-	86	59.375	ENSNGAG00000014213	Gtsf1	95	59.375	Nannospalax_galili
ENSCPBG00000024905	-	86	58.750	ENSNLEG00000017635	GTSF1	95	58.750	Nomascus_leucogenys
ENSCPBG00000024905	-	78	59.028	ENSMEUG00000016206	GTSF1	87	58.503	Notamacropus_eugenii
ENSCPBG00000024905	-	86	50.314	ENSOPRG00000017277	GTSF1	95	50.314	Ochotona_princeps
ENSCPBG00000024905	-	86	59.873	ENSODEG00000014220	GTSF1	95	59.375	Octodon_degus
ENSCPBG00000024905	-	85	57.516	ENSOANG00000011386	GTSF1	96	56.051	Ornithorhynchus_anatinus
ENSCPBG00000024905	-	86	59.375	ENSOCUG00000024495	GTSF1	95	59.375	Oryctolagus_cuniculus
ENSCPBG00000024905	-	79	36.806	ENSORLG00015005017	-	89	36.806	Oryzias_latipes_hsok
ENSCPBG00000024905	-	86	58.599	ENSOGAG00000017227	GTSF1	91	59.355	Otolemur_garnettii
ENSCPBG00000024905	-	87	58.385	ENSOARG00000016162	GTSF1	96	58.385	Ovis_aries
ENSCPBG00000024905	-	91	57.229	ENSPPAG00000028506	GTSF1	95	58.125	Pan_paniscus
ENSCPBG00000024905	-	91	48.810	ENSPPRG00000017612	-	91	48.810	Panthera_pardus
ENSCPBG00000024905	-	86	60.000	ENSPPRG00000004344	-	95	60.000	Panthera_pardus
ENSCPBG00000024905	-	91	48.810	ENSPTIG00000010868	-	91	48.810	Panthera_tigris_altaica
ENSCPBG00000024905	-	86	60.000	ENSPTIG00000020415	-	95	60.000	Panthera_tigris_altaica
ENSCPBG00000024905	-	95	53.714	ENSPTRG00000005041	GTSF1	95	58.125	Pan_troglodytes
ENSCPBG00000024905	-	91	57.831	ENSPANG00000020579	GTSF1	95	58.125	Papio_anubis
ENSCPBG00000024905	-	75	51.587	ENSPSIG00000009839	-	78	51.587	Pelodiscus_sinensis
ENSCPBG00000024905	-	87	68.354	ENSPSIG00000009968	GTSF1	76	70.968	Pelodiscus_sinensis
ENSCPBG00000024905	-	86	58.750	ENSPEMG00000009595	Gtsf1	95	58.750	Peromyscus_maniculatus_bairdii
ENSCPBG00000024905	-	86	58.750	ENSPCIG00000006731	GTSF1	95	58.750	Phascolarctos_cinereus
ENSCPBG00000024905	-	86	58.125	ENSPPYG00000004605	GTSF1	95	58.125	Pongo_abelii
ENSCPBG00000024905	-	91	51.190	ENSPCOG00000015201	-	96	51.807	Propithecus_coquereli
ENSCPBG00000024905	-	86	60.000	ENSPCOG00000016907	-	95	60.000	Propithecus_coquereli
ENSCPBG00000024905	-	86	60.000	ENSPVAG00000000333	GTSF1	95	60.000	Pteropus_vampyrus
ENSCPBG00000024905	-	84	38.065	ENSPNAG00000005737	-	85	38.065	Pygocentrus_nattereri
ENSCPBG00000024905	-	86	60.625	ENSRNOG00000036831	Gtsf1	84	60.625	Rattus_norvegicus
ENSCPBG00000024905	-	86	58.125	ENSRBIG00000043438	-	95	58.125	Rhinopithecus_bieti
ENSCPBG00000024905	-	86	56.688	ENSRBIG00000039916	-	84	56.688	Rhinopithecus_bieti
ENSCPBG00000024905	-	91	57.831	ENSRROG00000008137	GTSF1	95	58.125	Rhinopithecus_roxellana
ENSCPBG00000024905	-	86	57.962	ENSSBOG00000029460	GTSF1	95	57.500	Saimiri_boliviensis_boliviensis
ENSCPBG00000024905	-	86	62.500	ENSSHAG00000011633	GTSF1	95	62.500	Sarcophilus_harrisii
ENSCPBG00000024905	-	62	70.874	ENSSARG00000004928	GTSF1	60	70.874	Sorex_araneus
ENSCPBG00000024905	-	86	52.448	ENSSPUG00000010064	GTSF1	88	71.154	Sphenodon_punctatus
ENSCPBG00000024905	-	86	60.625	ENSSSCG00000026333	GTSF1	95	60.625	Sus_scrofa
ENSCPBG00000024905	-	69	55.263	ENSTGUG00000002008	-	88	55.263	Taeniopygia_guttata
ENSCPBG00000024905	-	86	60.377	ENSTBEG00000006154	GTSF1	99	60.377	Tupaia_belangeri
ENSCPBG00000024905	-	87	60.123	ENSTTRG00000004470	GTSF1	96	60.123	Tursiops_truncatus
ENSCPBG00000024905	-	89	57.669	ENSUAMG00000021669	GTSF1	93	57.669	Ursus_americanus
ENSCPBG00000024905	-	86	60.000	ENSUMAG00000011279	GTSF1	95	60.000	Ursus_maritimus
ENSCPBG00000024905	-	86	59.375	ENSVPAG00000007016	GTSF1	96	59.375	Vicugna_pacos
ENSCPBG00000024905	-	91	58.084	ENSVVUG00000023687	-	80	60.000	Vulpes_vulpes
ENSCPBG00000024905	-	87	54.088	ENSXETG00000033546	gtsf1	70	54.088	Xenopus_tropicalis