EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000025000 (Gene tree)
Gene ID: 101936471
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 30683 bases
Position: chrKK082964.1:1495944-1526626
Accession: 1058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036105	HRDC	PF00570.23	3e-11	1	1
ENSCPBP00000036126	HRDC	PF00570.23	3.5e-11	1	1
ENSCPBP00000036121	HRDC	PF00570.23	3.7e-11	1	1
ENSCPBP00000036119	HRDC	PF00570.23	3.8e-11	1	1
ENSCPBP00000036115	HRDC	PF00570.23	3.9e-11	1	1
ENSCPBP00000036113	HRDC	PF00570.23	4.3e-11	1	1
ENSCPBP00000036121	BDHCT	PF08072.11	1.2e-21	1	1
ENSCPBP00000036119	BDHCT	PF08072.11	1.2e-21	1	1
ENSCPBP00000036115	BDHCT	PF08072.11	1.3e-21	1	1
ENSCPBP00000036113	BDHCT	PF08072.11	1.4e-21	1	1
ENSCPBP00000036126	BDHCT	PF08072.11	5.5e-20	1	1
ENSCPBP00000036105	DEAD	PF00270.29	1.7e-19	1	1
ENSCPBP00000036126	DEAD	PF00270.29	2.1e-19	1	1
ENSCPBP00000036121	DEAD	PF00270.29	2.3e-19	1	1
ENSCPBP00000036119	DEAD	PF00270.29	2.3e-19	1	1
ENSCPBP00000036115	DEAD	PF00270.29	2.6e-19	1	1
ENSCPBP00000036113	DEAD	PF00270.29	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000042360	BLM-204	4176	-	ENSCPBP00000036119	1134 (aa)	-	-
ENSCPBT00000042365	BLM-205	3390	-	ENSCPBP00000036121	1129 (aa)	-	-
ENSCPBT00000042370	BLM-206	3210	-	ENSCPBP00000036126	1069 (aa)	-	-
ENSCPBT00000042354	BLM-203	3561	-	ENSCPBP00000036115	1186 (aa)	-	-
ENSCPBT00000042344	BLM-201	2961	-	ENSCPBP00000036105	986 (aa)	-	-
ENSCPBT00000042352	BLM-202	3810	-	ENSCPBP00000036113	1269 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000025000's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03440	Homologous recombination	KEGG
cpic03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000025000	BLM	54	38.889	ENSCPBG00000009109	RECQL	79	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025000	BLM	98	73.140	ENSG00000197299	BLM	89	54.773	Homo_sapiens
ENSCPBG00000025000	BLM	99	51.868	ENSAPOG00000017966	blm	85	52.031	Acanthochromis_polyacanthus
ENSCPBG00000025000	BLM	96	59.744	ENSAMEG00000013843	BLM	89	55.207	Ailuropoda_melanoleuca
ENSCPBG00000025000	BLM	97	53.888	ENSACIG00000023762	blm	72	60.619	Amphilophus_citrinellus
ENSCPBG00000025000	BLM	98	53.362	ENSAOCG00000003318	blm	81	52.357	Amphiprion_ocellaris
ENSCPBG00000025000	BLM	98	53.304	ENSAPEG00000018105	blm	79	52.565	Amphiprion_percula
ENSCPBG00000025000	BLM	96	54.059	ENSATEG00000006421	blm	83	52.256	Anabas_testudineus
ENSCPBG00000025000	BLM	99	70.061	ENSAPLG00000006878	BLM	99	68.688	Anas_platyrhynchos
ENSCPBG00000025000	BLM	99	73.919	ENSACAG00000014275	BLM	75	74.173	Anolis_carolinensis
ENSCPBG00000025000	BLM	85	74.064	ENSANAG00000038415	BLM	89	54.718	Aotus_nancymaae
ENSCPBG00000025000	BLM	99	52.718	ENSACLG00000020354	blm	84	52.148	Astatotilapia_calliptera
ENSCPBG00000025000	BLM	80	65.854	ENSAMXG00000016970	blm	82	52.600	Astyanax_mexicanus
ENSCPBG00000025000	BLM	87	80.526	ENSBTAG00000020301	BLM	66	80.526	Bos_taurus
ENSCPBG00000025000	BLM	67	38.610	WBGene00001865	him-6	77	38.610	Caenorhabditis_elegans
ENSCPBG00000025000	BLM	98	59.768	ENSCJAG00000009803	BLM	89	55.641	Callithrix_jacchus
ENSCPBG00000025000	BLM	84	73.846	ENSCAFG00000012385	BLM	89	54.829	Canis_familiaris
ENSCPBG00000025000	BLM	99	58.479	ENSCAFG00020016111	BLM	95	72.386	Canis_lupus_dingo
ENSCPBG00000025000	BLM	90	80.526	ENSCHIG00000010329	BLM	66	80.526	Capra_hircus
ENSCPBG00000025000	BLM	85	73.370	ENSTSYG00000012368	BLM	89	55.233	Carlito_syrichta
ENSCPBG00000025000	BLM	86	75.719	ENSCAPG00000017976	BLM	90	65.612	Cavia_aperea
ENSCPBG00000025000	BLM	97	71.858	ENSCPOG00000001761	BLM	89	54.718	Cavia_porcellus
ENSCPBG00000025000	BLM	97	74.064	ENSCCAG00000023069	BLM	89	55.130	Cebus_capucinus
ENSCPBG00000025000	BLM	85	74.202	ENSCATG00000040609	BLM	91	71.117	Cercocebus_atys
ENSCPBG00000025000	BLM	96	72.879	ENSCLAG00000012111	BLM	89	54.649	Chinchilla_lanigera
ENSCPBG00000025000	BLM	98	59.786	ENSCSAG00000017040	BLM	88	55.267	Chlorocebus_sabaeus
ENSCPBG00000025000	BLM	93	61.378	ENSCHOG00000006255	BLM	85	61.378	Choloepus_hoffmanni
ENSCPBG00000025000	BLM	54	36.872	ENSCSAVG00000007521	-	88	36.872	Ciona_savignyi
ENSCPBG00000025000	BLM	76	63.830	ENSCANG00000034808	BLM	86	48.772	Colobus_angolensis_palliatus
ENSCPBG00000025000	BLM	88	73.870	ENSCGRG00001024897	Blm	89	55.046	Cricetulus_griseus_chok1gshd
ENSCPBG00000025000	BLM	65	47.004	ENSCGRG00000016261	Blm	81	48.528	Cricetulus_griseus_crigri
ENSCPBG00000025000	BLM	82	61.744	ENSCSEG00000013483	blm	84	53.630	Cynoglossus_semilaevis
ENSCPBG00000025000	BLM	66	52.564	ENSCVAG00000017583	blm	67	60.894	Cyprinodon_variegatus
ENSCPBG00000025000	BLM	90	63.011	ENSDARG00000077089	blm	91	50.225	Danio_rerio
ENSCPBG00000025000	BLM	95	73.521	ENSDNOG00000010159	BLM	89	55.193	Dasypus_novemcinctus
ENSCPBG00000025000	BLM	95	58.948	ENSDORG00000011033	Blm	99	60.345	Dipodomys_ordii
ENSCPBG00000025000	BLM	65	44.848	FBgn0002906	Blm	57	39.649	Drosophila_melanogaster
ENSCPBG00000025000	BLM	87	49.400	ENSETEG00000015019	BLM	72	49.169	Echinops_telfairi
ENSCPBG00000025000	BLM	59	57.797	ENSEBUG00000015743	-	99	51.364	Eptatretus_burgeri
ENSCPBG00000025000	BLM	97	71.023	ENSEASG00005006727	BLM	89	54.609	Equus_asinus_asinus
ENSCPBG00000025000	BLM	95	73.669	ENSECAG00000011405	BLM	89	55.896	Equus_caballus
ENSCPBG00000025000	BLM	99	58.289	ENSEEUG00000001434	BLM	89	54.308	Erinaceus_europaeus
ENSCPBG00000025000	BLM	80	64.034	ENSELUG00000019098	blm	78	52.600	Esox_lucius
ENSCPBG00000025000	BLM	96	74.090	ENSFCAG00000006087	BLM	89	55.209	Felis_catus
ENSCPBG00000025000	BLM	99	60.244	ENSFALG00000010981	BLM	99	56.545	Ficedula_albicollis
ENSCPBG00000025000	BLM	96	58.194	ENSFDAG00000012658	BLM	88	47.001	Fukomys_damarensis
ENSCPBG00000025000	BLM	97	51.724	ENSFHEG00000002553	blm	86	49.068	Fundulus_heteroclitus
ENSCPBG00000025000	BLM	82	64.268	ENSGMOG00000016431	blm	99	59.629	Gadus_morhua
ENSCPBG00000025000	BLM	99	65.939	ENSGALG00000008256	BLM	92	62.625	Gallus_gallus
ENSCPBG00000025000	BLM	78	64.540	ENSGAFG00000001117	blm	87	51.118	Gambusia_affinis
ENSCPBG00000025000	BLM	97	51.446	ENSGACG00000010863	blm	100	71.429	Gasterosteus_aculeatus
ENSCPBG00000025000	BLM	89	97.900	ENSGAGG00000005383	BLM	98	92.105	Gopherus_agassizii
ENSCPBG00000025000	BLM	97	73.786	ENSGGOG00000007710	BLM	91	71.117	Gorilla_gorilla
ENSCPBG00000025000	BLM	99	52.591	ENSHBUG00000015943	blm	91	49.924	Haplochromis_burtoni
ENSCPBG00000025000	BLM	95	73.446	ENSHGLG00000013231	BLM	88	54.636	Heterocephalus_glaber_female
ENSCPBG00000025000	BLM	93	55.102	ENSHCOG00000011455	blm	99	55.253	Hippocampus_comes
ENSCPBG00000025000	BLM	93	55.621	ENSIPUG00000000529	blm	83	58.804	Ictalurus_punctatus
ENSCPBG00000025000	BLM	98	59.002	ENSSTOG00000005000	BLM	89	54.787	Ictidomys_tridecemlineatus
ENSCPBG00000025000	BLM	95	54.898	ENSJJAG00000016322	Blm	99	56.232	Jaculus_jaculus
ENSCPBG00000025000	BLM	79	64.190	ENSKMAG00000016608	blm	80	52.816	Kryptolebias_marmoratus
ENSCPBG00000025000	BLM	65	72.006	ENSLBEG00000018729	blm	90	64.175	Labrus_bergylta
ENSCPBG00000025000	BLM	86	73.706	ENSLACG00000006490	BLM	79	56.489	Latimeria_chalumnae
ENSCPBG00000025000	BLM	99	53.770	ENSLOCG00000014302	blm	85	54.364	Lepisosteus_oculatus
ENSCPBG00000025000	BLM	97	74.202	ENSMFAG00000042982	BLM	91	70.845	Macaca_fascicularis
ENSCPBG00000025000	BLM	97	74.064	ENSMMUG00000019526	BLM	91	70.845	Macaca_mulatta
ENSCPBG00000025000	BLM	98	59.517	ENSMNEG00000031251	BLM	91	70.572	Macaca_nemestrina
ENSCPBG00000025000	BLM	97	70.042	ENSMLEG00000032934	BLM	89	53.018	Mandrillus_leucophaeus
ENSCPBG00000025000	BLM	96	53.441	ENSMAMG00000008726	blm	83	51.626	Mastacembelus_armatus
ENSCPBG00000025000	BLM	99	53.038	ENSMZEG00005022323	blm	82	53.513	Maylandia_zebra
ENSCPBG00000025000	BLM	53	81.192	ENSMGAG00000010473	BLM	100	78.438	Meleagris_gallopavo
ENSCPBG00000025000	BLM	88	74.022	ENSMAUG00000008953	Blm	89	55.581	Mesocricetus_auratus
ENSCPBG00000025000	BLM	98	59.839	ENSMICG00000034442	BLM	89	55.759	Microcebus_murinus
ENSCPBG00000025000	BLM	88	74.402	ENSMOCG00000016367	Blm	89	55.352	Microtus_ochrogaster
ENSCPBG00000025000	BLM	97	53.765	ENSMMOG00000006959	blm	89	49.204	Mola_mola
ENSCPBG00000025000	BLM	86	74.760	ENSMODG00000019449	BLM	90	57.089	Monodelphis_domestica
ENSCPBG00000025000	BLM	72	68.407	ENSMALG00000007323	blm	80	53.021	Monopterus_albus
ENSCPBG00000025000	BLM	88	72.841	MGP_CAROLIEiJ_G0029907	Blm	84	56.327	Mus_caroli
ENSCPBG00000025000	BLM	89	73.259	ENSMUSG00000030528	Blm	89	54.387	Mus_musculus
ENSCPBG00000025000	BLM	90	73.640	MGP_PahariEiJ_G0013129	Blm	89	54.670	Mus_pahari
ENSCPBG00000025000	BLM	88	73.296	MGP_SPRETEiJ_G0031009	Blm	83	56.796	Mus_spretus
ENSCPBG00000025000	BLM	78	60.022	ENSMPUG00000015657	BLM	86	55.444	Mustela_putorius_furo
ENSCPBG00000025000	BLM	99	59.099	ENSMLUG00000014697	BLM	89	55.471	Myotis_lucifugus
ENSCPBG00000025000	BLM	88	73.305	ENSNGAG00000001275	Blm	89	54.393	Nannospalax_galili
ENSCPBG00000025000	BLM	99	53.180	ENSNBRG00000019702	blm	80	54.401	Neolamprologus_brichardi
ENSCPBG00000025000	BLM	97	70.874	ENSNLEG00000012087	BLM	99	58.387	Nomascus_leucogenys
ENSCPBG00000025000	BLM	98	56.643	ENSMEUG00000007253	BLM	89	52.923	Notamacropus_eugenii
ENSCPBG00000025000	BLM	93	71.089	ENSOPRG00000011667	BLM	83	71.089	Ochotona_princeps
ENSCPBG00000025000	BLM	95	56.221	ENSODEG00000015373	BLM	99	57.357	Octodon_degus
ENSCPBG00000025000	BLM	79	62.382	ENSONIG00000015193	blm	82	59.291	Oreochromis_niloticus
ENSCPBG00000025000	BLM	70	75.281	ENSOANG00000009316	-	100	73.541	Ornithorhynchus_anatinus
ENSCPBG00000025000	BLM	89	73.315	ENSOCUG00000013969	BLM	89	53.242	Oryctolagus_cuniculus
ENSCPBG00000025000	BLM	94	55.313	ENSORLG00000008110	blm	76	56.144	Oryzias_latipes
ENSCPBG00000025000	BLM	94	55.471	ENSORLG00020004812	blm	76	56.209	Oryzias_latipes_hni
ENSCPBG00000025000	BLM	94	55.545	ENSORLG00015018640	blm	99	56.413	Oryzias_latipes_hsok
ENSCPBG00000025000	BLM	94	55.085	ENSOMEG00000023545	blm	76	55.566	Oryzias_melastigma
ENSCPBG00000025000	BLM	79	76.982	ENSOGAG00000005708	BLM	90	53.022	Otolemur_garnettii
ENSCPBG00000025000	BLM	96	72.627	ENSOARG00000012875	BLM	89	55.436	Ovis_aries
ENSCPBG00000025000	BLM	97	73.509	ENSPPAG00000032173	BLM	89	54.947	Pan_paniscus
ENSCPBG00000025000	BLM	97	73.648	ENSPPRG00000002471	BLM	89	55.057	Panthera_pardus
ENSCPBG00000025000	BLM	97	72.954	ENSPTIG00000016168	BLM	89	55.042	Panthera_tigris_altaica
ENSCPBG00000025000	BLM	96	73.810	ENSPTRG00000007460	BLM	89	54.787	Pan_troglodytes
ENSCPBG00000025000	BLM	97	74.064	ENSPANG00000018572	BLM	91	70.845	Papio_anubis
ENSCPBG00000025000	BLM	97	52.506	ENSPKIG00000008954	blm	76	55.394	Paramormyrops_kingsleyae
ENSCPBG00000025000	BLM	56	94.964	ENSPSIG00000009792	BLM	99	94.964	Pelodiscus_sinensis
ENSCPBG00000025000	BLM	72	67.215	ENSPMGG00000006629	blm	100	56.405	Periophthalmus_magnuspinnatus
ENSCPBG00000025000	BLM	94	73.816	ENSPEMG00000017348	Blm	89	55.887	Peromyscus_maniculatus_bairdii
ENSCPBG00000025000	BLM	66	61.585	ENSPMAG00000000445	blm	99	57.353	Petromyzon_marinus
ENSCPBG00000025000	BLM	97	75.691	ENSPCIG00000006609	BLM	90	57.855	Phascolarctos_cinereus
ENSCPBG00000025000	BLM	77	64.118	ENSPFOG00000005059	blm	82	50.998	Poecilia_formosa
ENSCPBG00000025000	BLM	72	68.837	ENSPLAG00000017344	blm	82	51.080	Poecilia_latipinna
ENSCPBG00000025000	BLM	72	68.516	ENSPMEG00000000321	blm	82	50.998	Poecilia_mexicana
ENSCPBG00000025000	BLM	72	68.194	ENSPREG00000007715	blm	82	50.831	Poecilia_reticulata
ENSCPBG00000025000	BLM	97	72.816	ENSPPYG00000006784	BLM	89	54.401	Pongo_abelii
ENSCPBG00000025000	BLM	84	65.157	ENSPCAG00000008960	BLM	71	65.202	Procavia_capensis
ENSCPBG00000025000	BLM	99	51.694	ENSPCOG00000000439	BLM	87	51.807	Propithecus_coquereli
ENSCPBG00000025000	BLM	85	80.456	ENSPVAG00000011642	BLM	76	80.456	Pteropus_vampyrus
ENSCPBG00000025000	BLM	99	45.226	ENSPNYG00000010956	blm	88	43.152	Pundamilia_nyererei
ENSCPBG00000025000	BLM	80	63.991	ENSPNAG00000011714	blm	81	54.316	Pygocentrus_nattereri
ENSCPBG00000025000	BLM	98	72.199	ENSRNOG00000011213	Blm	89	54.503	Rattus_norvegicus
ENSCPBG00000025000	BLM	98	73.925	ENSRBIG00000029656	BLM	91	70.845	Rhinopithecus_bieti
ENSCPBG00000025000	BLM	97	73.925	ENSRROG00000037871	BLM	91	70.845	Rhinopithecus_roxellana
ENSCPBG00000025000	BLM	87	59.830	ENSSBOG00000030957	BLM	88	54.393	Saimiri_boliviensis_boliviensis
ENSCPBG00000025000	BLM	97	75.140	ENSSHAG00000007988	BLM	89	55.856	Sarcophilus_harrisii
ENSCPBG00000025000	BLM	71	67.075	ENSSFOG00015015462	blm	71	60.706	Scleropages_formosus
ENSCPBG00000025000	BLM	99	52.609	ENSSMAG00000001120	blm	83	53.351	Scophthalmus_maximus
ENSCPBG00000025000	BLM	72	68.501	ENSSDUG00000010955	blm	91	49.702	Seriola_dumerili
ENSCPBG00000025000	BLM	98	53.460	ENSSLDG00000000634	blm	82	54.033	Seriola_lalandi_dorsalis
ENSCPBG00000025000	BLM	98	55.160	ENSSARG00000006398	BLM	81	55.644	Sorex_araneus
ENSCPBG00000025000	BLM	99	67.867	ENSSPUG00000000013	BLM	99	68.288	Sphenodon_punctatus
ENSCPBG00000025000	BLM	81	62.559	ENSSPAG00000013999	blm	79	52.811	Stegastes_partitus
ENSCPBG00000025000	BLM	97	73.743	ENSSSCG00000001816	BLM	89	55.650	Sus_scrofa
ENSCPBG00000025000	BLM	99	56.038	ENSTGUG00000009959	-	100	56.533	Taeniopygia_guttata
ENSCPBG00000025000	BLM	77	64.459	ENSTRUG00000019860	blm	82	53.018	Takifugu_rubripes
ENSCPBG00000025000	BLM	96	53.721	ENSTNIG00000019246	blm	76	56.329	Tetraodon_nigroviridis
ENSCPBG00000025000	BLM	63	76.238	ENSTBEG00000006706	BLM	61	65.341	Tupaia_belangeri
ENSCPBG00000025000	BLM	95	74.090	ENSTTRG00000016386	BLM	89	56.402	Tursiops_truncatus
ENSCPBG00000025000	BLM	99	57.592	ENSUMAG00000009105	BLM	98	71.951	Ursus_maritimus
ENSCPBG00000025000	BLM	96	68.428	ENSVPAG00000000085	BLM	89	53.612	Vicugna_pacos
ENSCPBG00000025000	BLM	92	71.272	ENSVVUG00000006402	BLM	87	71.370	Vulpes_vulpes
ENSCPBG00000025000	BLM	95	75.900	ENSXETG00000007847	blm	90	53.614	Xenopus_tropicalis
ENSCPBG00000025000	BLM	72	65.000	ENSXCOG00000020227	blm	74	52.760	Xiphophorus_couchianus
ENSCPBG00000025000	BLM	76	63.971	ENSXMAG00000002951	blm	82	51.385	Xiphophorus_maculatus