EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025243 (Gene tree)
Gene ID: 101950784
Gene Symbol: MRPS18A
Alias: FLJ10548|MRPS18-3
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 27507 bases
Position: chr3:17159908-17187414
Accession: 14515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036340	Ribosomal_S18	PF01084.20	1.4e-15	1	1
ENSCPBP00000036337	Ribosomal_S18	PF01084.20	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000042619	MRPS18A-202	573	-	ENSCPBP00000036340	190 (aa)	-	UPI00046C142B
ENSCPBT00000042616	MRPS18A-201	579	-	ENSCPBP00000036337	192 (aa)	XP_005296361	UPI0003890449

Gene Model

Click here to download ENSCPBG00000025243's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025243	MRPS18A	100	62.755	ENSG00000096080	MRPS18A	99	65.079	Homo_sapiens
ENSCPBG00000025243	MRPS18A	100	60.714	ENSAMEG00000012117	MRPS18A	100	60.714	Ailuropoda_melanoleuca
ENSCPBG00000025243	MRPS18A	84	66.463	ENSACIG00000017782	mrps18a	79	66.463	Amphilophus_citrinellus
ENSCPBG00000025243	MRPS18A	100	52.404	ENSAPEG00000006971	mrps18a	100	52.404	Amphiprion_percula
ENSCPBG00000025243	MRPS18A	85	65.244	ENSATEG00000003132	mrps18a	79	65.244	Anabas_testudineus
ENSCPBG00000025243	MRPS18A	82	81.529	ENSAPLG00000016280	MRPS18A	100	81.529	Anas_platyrhynchos
ENSCPBG00000025243	MRPS18A	100	68.750	ENSACAG00000000642	MRPS18A	100	68.750	Anolis_carolinensis
ENSCPBG00000025243	MRPS18A	100	62.755	ENSANAG00000030889	MRPS18A	99	65.079	Aotus_nancymaae
ENSCPBG00000025243	MRPS18A	84	64.634	ENSACLG00000008170	mrps18a	83	65.563	Astatotilapia_calliptera
ENSCPBG00000025243	MRPS18A	58	68.103	ENSAMXG00000036055	-	85	68.103	Astyanax_mexicanus
ENSCPBG00000025243	MRPS18A	89	59.195	ENSAMXG00000036348	mrps18a	82	59.195	Astyanax_mexicanus
ENSCPBG00000025243	MRPS18A	100	62.755	ENSBTAG00000025571	MRPS18A	100	62.755	Bos_taurus
ENSCPBG00000025243	MRPS18A	59	31.250	WBGene00022583	mrps-18A	59	32.143	Caenorhabditis_elegans
ENSCPBG00000025243	MRPS18A	100	62.755	ENSCJAG00000017382	MRPS18A	99	65.079	Callithrix_jacchus
ENSCPBG00000025243	MRPS18A	100	62.245	ENSCAFG00000001928	MRPS18A	100	62.245	Canis_familiaris
ENSCPBG00000025243	MRPS18A	100	62.245	ENSCAFG00020012064	MRPS18A	83	62.245	Canis_lupus_dingo
ENSCPBG00000025243	MRPS18A	100	62.755	ENSCHIG00000013039	MRPS18A	100	62.755	Capra_hircus
ENSCPBG00000025243	MRPS18A	100	61.224	ENSTSYG00000001390	MRPS18A	99	65.079	Carlito_syrichta
ENSCPBG00000025243	MRPS18A	74	68.667	ENSCAPG00000016029	MRPS18A	94	68.667	Cavia_aperea
ENSCPBG00000025243	MRPS18A	95	65.775	ENSCPOG00000022949	MRPS18A	95	65.775	Cavia_porcellus
ENSCPBG00000025243	MRPS18A	97	63.874	ENSCCAG00000021108	MRPS18A	97	63.874	Cebus_capucinus
ENSCPBG00000025243	MRPS18A	89	64.162	ENSCATG00000012963	MRPS18A	95	61.658	Cercocebus_atys
ENSCPBG00000025243	MRPS18A	100	63.776	ENSCLAG00000012929	MRPS18A	100	63.776	Chinchilla_lanigera
ENSCPBG00000025243	MRPS18A	89	64.162	ENSCSAG00000012127	MRPS18A	100	60.714	Chlorocebus_sabaeus
ENSCPBG00000025243	MRPS18A	76	39.865	ENSCING00000024771	-	75	39.865	Ciona_intestinalis
ENSCPBG00000025243	MRPS18A	79	36.364	ENSCSAVG00000009539	-	87	36.364	Ciona_savignyi
ENSCPBG00000025243	MRPS18A	97	62.304	ENSCANG00000039873	MRPS18A	99	63.492	Colobus_angolensis_palliatus
ENSCPBG00000025243	MRPS18A	99	60.104	ENSCGRG00001017882	Mrps18a	99	60.104	Cricetulus_griseus_chok1gshd
ENSCPBG00000025243	MRPS18A	99	46.354	ENSCGRG00000000079	Mrps18a	96	46.354	Cricetulus_griseus_crigri
ENSCPBG00000025243	MRPS18A	85	67.879	ENSCSEG00000019650	mrps18a	79	66.061	Cynoglossus_semilaevis
ENSCPBG00000025243	MRPS18A	100	57.212	ENSCVAG00000006511	mrps18a	100	57.212	Cyprinodon_variegatus
ENSCPBG00000025243	MRPS18A	85	62.275	ENSDARG00000024465	mrps18a	80	64.072	Danio_rerio
ENSCPBG00000025243	MRPS18A	100	62.755	ENSDNOG00000035755	MRPS18A	99	62.755	Dasypus_novemcinctus
ENSCPBG00000025243	MRPS18A	100	63.265	ENSDORG00000014583	Mrps18a	100	63.265	Dipodomys_ordii
ENSCPBG00000025243	MRPS18A	74	35.811	FBgn0051450	mRpS18A	94	35.811	Drosophila_melanogaster
ENSCPBG00000025243	MRPS18A	76	56.216	ENSETEG00000014171	MRPS18A	100	56.216	Echinops_telfairi
ENSCPBG00000025243	MRPS18A	88	68.023	ENSEASG00005003485	MRPS18A	63	68.023	Equus_asinus_asinus
ENSCPBG00000025243	MRPS18A	86	68.047	ENSECAG00000004870	MRPS18A	62	68.047	Equus_caballus
ENSCPBG00000025243	MRPS18A	84	64.242	ENSELUG00000005253	mrps18a	78	64.242	Esox_lucius
ENSCPBG00000025243	MRPS18A	100	61.735	ENSFCAG00000036031	MRPS18A	99	65.079	Felis_catus
ENSCPBG00000025243	MRPS18A	100	79.167	ENSFALG00000011356	MRPS18A	100	79.167	Ficedula_albicollis
ENSCPBG00000025243	MRPS18A	86	65.680	ENSFDAG00000012875	MRPS18A	85	65.680	Fukomys_damarensis
ENSCPBG00000025243	MRPS18A	100	56.731	ENSFHEG00000009014	mrps18a	100	56.731	Fundulus_heteroclitus
ENSCPBG00000025243	MRPS18A	93	56.906	ENSGMOG00000012493	mrps18a	80	61.818	Gadus_morhua
ENSCPBG00000025243	MRPS18A	77	80.137	ENSGALG00000010296	MRPS18A	100	80.137	Gallus_gallus
ENSCPBG00000025243	MRPS18A	85	68.485	ENSGAFG00000005211	mrps18a	82	69.079	Gambusia_affinis
ENSCPBG00000025243	MRPS18A	100	53.922	ENSGACG00000013370	mrps18a	100	53.922	Gasterosteus_aculeatus
ENSCPBG00000025243	MRPS18A	76	96.575	ENSGAGG00000017954	MRPS18A	79	96.575	Gopherus_agassizii
ENSCPBG00000025243	MRPS18A	100	61.735	ENSGGOG00000006303	-	99	63.492	Gorilla_gorilla
ENSCPBG00000025243	MRPS18A	84	64.634	ENSHBUG00000014682	mrps18a	79	64.634	Haplochromis_burtoni
ENSCPBG00000025243	MRPS18A	100	61.735	ENSHGLG00000014356	MRPS18A	100	61.735	Heterocephalus_glaber_female
ENSCPBG00000025243	MRPS18A	100	61.735	ENSHGLG00100010988	MRPS18A	100	61.735	Heterocephalus_glaber_male
ENSCPBG00000025243	MRPS18A	100	59.223	ENSHCOG00000000856	mrps18a	100	59.223	Hippocampus_comes
ENSCPBG00000025243	MRPS18A	85	62.651	ENSIPUG00000017406	mrps18a	80	63.253	Ictalurus_punctatus
ENSCPBG00000025243	MRPS18A	100	58.738	ENSSTOG00000004490	MRPS18A	100	58.738	Ictidomys_tridecemlineatus
ENSCPBG00000025243	MRPS18A	100	61.735	ENSJJAG00000006567	Mrps18a	100	61.735	Jaculus_jaculus
ENSCPBG00000025243	MRPS18A	85	66.061	ENSKMAG00000014910	mrps18a	79	66.061	Kryptolebias_marmoratus
ENSCPBG00000025243	MRPS18A	85	64.242	ENSLBEG00000003391	mrps18a	79	64.242	Labrus_bergylta
ENSCPBG00000025243	MRPS18A	88	52.353	ENSLACG00000022160	mrps18a	79	52.353	Latimeria_chalumnae
ENSCPBG00000025243	MRPS18A	85	67.470	ENSLOCG00000016008	mrps18a	79	67.470	Lepisosteus_oculatus
ENSCPBG00000025243	MRPS18A	100	60.204	ENSLAFG00000001168	MRPS18A	100	60.204	Loxodonta_africana
ENSCPBG00000025243	MRPS18A	89	64.162	ENSMFAG00000038311	MRPS18A	99	62.698	Macaca_fascicularis
ENSCPBG00000025243	MRPS18A	89	64.162	ENSMMUG00000014749	MRPS18A	99	62.698	Macaca_mulatta
ENSCPBG00000025243	MRPS18A	89	63.584	ENSMNEG00000044642	MRPS18A	99	61.905	Macaca_nemestrina
ENSCPBG00000025243	MRPS18A	81	65.823	ENSMLEG00000041828	MRPS18A	100	65.823	Mandrillus_leucophaeus
ENSCPBG00000025243	MRPS18A	100	56.731	ENSMAMG00000015478	mrps18a	100	56.731	Mastacembelus_armatus
ENSCPBG00000025243	MRPS18A	84	64.634	ENSMZEG00005014925	mrps18a	83	65.563	Maylandia_zebra
ENSCPBG00000025243	MRPS18A	100	78.125	ENSMGAG00000010915	MRPS18A	100	78.125	Meleagris_gallopavo
ENSCPBG00000025243	MRPS18A	100	62.755	ENSMICG00000005062	MRPS18A	99	66.667	Microcebus_murinus
ENSCPBG00000025243	MRPS18A	93	63.388	ENSMOCG00000015168	-	97	63.388	Microtus_ochrogaster
ENSCPBG00000025243	MRPS18A	100	64.796	ENSMOCG00000021207	-	100	64.796	Microtus_ochrogaster
ENSCPBG00000025243	MRPS18A	54	62.136	ENSMMOG00000015315	mrps18a	71	62.136	Mola_mola
ENSCPBG00000025243	MRPS18A	85	65.455	ENSMMOG00000015248	mrps18a	80	65.455	Mola_mola
ENSCPBG00000025243	MRPS18A	100	56.067	ENSMODG00000018952	MRPS18A	100	56.067	Monodelphis_domestica
ENSCPBG00000025243	MRPS18A	85	64.848	ENSMALG00000017044	mrps18a	81	66.892	Monopterus_albus
ENSCPBG00000025243	MRPS18A	100	62.245	MGP_CAROLIEiJ_G0021656	Mrps18a	100	66.443	Mus_caroli
ENSCPBG00000025243	MRPS18A	100	61.735	ENSMUSG00000023967	Mrps18a	100	65.772	Mus_musculus
ENSCPBG00000025243	MRPS18A	100	61.735	MGP_PahariEiJ_G0020648	Mrps18a	100	65.772	Mus_pahari
ENSCPBG00000025243	MRPS18A	100	61.735	MGP_SPRETEiJ_G0022568	Mrps18a	100	65.772	Mus_spretus
ENSCPBG00000025243	MRPS18A	100	62.245	ENSMPUG00000012868	MRPS18A	83	62.245	Mustela_putorius_furo
ENSCPBG00000025243	MRPS18A	99	64.341	ENSMLUG00000017755	MRPS18A	99	62.371	Myotis_lucifugus
ENSCPBG00000025243	MRPS18A	100	62.371	ENSNGAG00000020052	Mrps18a	100	62.371	Nannospalax_galili
ENSCPBG00000025243	MRPS18A	84	64.024	ENSNBRG00000021152	mrps18a	84	60.843	Neolamprologus_brichardi
ENSCPBG00000025243	MRPS18A	100	61.735	ENSNLEG00000003865	MRPS18A	99	63.492	Nomascus_leucogenys
ENSCPBG00000025243	MRPS18A	100	52.610	ENSMEUG00000013986	MRPS18A	100	52.209	Notamacropus_eugenii
ENSCPBG00000025243	MRPS18A	98	64.516	ENSOPRG00000007680	MRPS18A	77	64.516	Ochotona_princeps
ENSCPBG00000025243	MRPS18A	100	63.776	ENSODEG00000015388	MRPS18A	100	63.776	Octodon_degus
ENSCPBG00000025243	MRPS18A	84	65.244	ENSONIG00000000609	mrps18a	79	65.244	Oreochromis_niloticus
ENSCPBG00000025243	MRPS18A	81	67.516	ENSOANG00000001955	MRPS18A	99	67.516	Ornithorhynchus_anatinus
ENSCPBG00000025243	MRPS18A	100	61.735	ENSOCUG00000005544	MRPS18A	100	61.735	Oryctolagus_cuniculus
ENSCPBG00000025243	MRPS18A	85	65.455	ENSORLG00000023864	mrps18a	80	65.455	Oryzias_latipes
ENSCPBG00000025243	MRPS18A	85	65.455	ENSORLG00020002882	mrps18a	80	65.455	Oryzias_latipes_hni
ENSCPBG00000025243	MRPS18A	85	64.848	ENSORLG00015022065	mrps18a	80	64.848	Oryzias_latipes_hsok
ENSCPBG00000025243	MRPS18A	85	64.242	ENSOMEG00000018124	mrps18a	79	64.242	Oryzias_melastigma
ENSCPBG00000025243	MRPS18A	95	63.636	ENSOGAG00000026551	MRPS18A	94	63.636	Otolemur_garnettii
ENSCPBG00000025243	MRPS18A	100	62.755	ENSOARG00000008279	MRPS18A	100	62.755	Ovis_aries
ENSCPBG00000025243	MRPS18A	100	62.755	ENSPPAG00000036291	MRPS18A	99	65.079	Pan_paniscus
ENSCPBG00000025243	MRPS18A	100	62.245	ENSPPRG00000006429	MRPS18A	99	65.079	Panthera_pardus
ENSCPBG00000025243	MRPS18A	100	62.755	ENSPTIG00000001653	MRPS18A	99	65.873	Panthera_tigris_altaica
ENSCPBG00000025243	MRPS18A	100	62.755	ENSPTRG00000018209	MRPS18A	99	65.079	Pan_troglodytes
ENSCPBG00000025243	MRPS18A	89	64.162	ENSPANG00000006967	MRPS18A	99	62.698	Papio_anubis
ENSCPBG00000025243	MRPS18A	85	67.683	ENSPKIG00000012807	mrps18a	71	67.683	Paramormyrops_kingsleyae
ENSCPBG00000025243	MRPS18A	84	86.957	ENSPSIG00000013672	MRPS18A	85	86.957	Pelodiscus_sinensis
ENSCPBG00000025243	MRPS18A	76	65.772	ENSPMGG00000000493	mrps18a	78	64.286	Periophthalmus_magnuspinnatus
ENSCPBG00000025243	MRPS18A	100	62.245	ENSPEMG00000000405	Mrps18a	100	62.245	Peromyscus_maniculatus_bairdii
ENSCPBG00000025243	MRPS18A	85	65.244	ENSPMAG00000007012	mrps18a	90	65.244	Petromyzon_marinus
ENSCPBG00000025243	MRPS18A	100	67.347	ENSPCIG00000024858	MRPS18A	100	67.347	Phascolarctos_cinereus
ENSCPBG00000025243	MRPS18A	82	67.925	ENSPFOG00000009046	mrps18a	100	67.925	Poecilia_formosa
ENSCPBG00000025243	MRPS18A	100	58.654	ENSPLAG00000011106	mrps18a	100	58.654	Poecilia_latipinna
ENSCPBG00000025243	MRPS18A	100	59.278	ENSPMEG00000000736	mrps18a	100	59.278	Poecilia_mexicana
ENSCPBG00000025243	MRPS18A	100	57.075	ENSPREG00000012172	mrps18a	95	57.075	Poecilia_reticulata
ENSCPBG00000025243	MRPS18A	100	62.245	ENSPPYG00000017282	MRPS18A	100	62.245	Pongo_abelii
ENSCPBG00000025243	MRPS18A	80	50.980	ENSPCAG00000004192	MRPS18A	99	50.980	Procavia_capensis
ENSCPBG00000025243	MRPS18A	100	63.265	ENSPCOG00000014911	MRPS18A	99	66.667	Propithecus_coquereli
ENSCPBG00000025243	MRPS18A	100	66.400	ENSPVAG00000002758	MRPS18A	74	66.400	Pteropus_vampyrus
ENSCPBG00000025243	MRPS18A	84	64.634	ENSPNYG00000014753	mrps18a	79	64.634	Pundamilia_nyererei
ENSCPBG00000025243	MRPS18A	84	62.048	ENSPNAG00000023462	mrps18a	79	62.048	Pygocentrus_nattereri
ENSCPBG00000025243	MRPS18A	100	62.755	ENSRNOG00000019511	Mrps18a	100	62.755	Rattus_norvegicus
ENSCPBG00000025243	MRPS18A	97	62.304	ENSRBIG00000028789	MRPS18A	99	63.492	Rhinopithecus_bieti
ENSCPBG00000025243	MRPS18A	97	62.304	ENSRROG00000042368	-	99	63.492	Rhinopithecus_roxellana
ENSCPBG00000025243	MRPS18A	99	62.371	ENSSBOG00000019943	MRPS18A	99	63.492	Saimiri_boliviensis_boliviensis
ENSCPBG00000025243	MRPS18A	100	64.796	ENSSHAG00000015048	-	100	64.796	Sarcophilus_harrisii
ENSCPBG00000025243	MRPS18A	85	67.073	ENSSFOG00015005628	mrps18a	80	67.073	Scleropages_formosus
ENSCPBG00000025243	MRPS18A	100	56.585	ENSSMAG00000009353	mrps18a	100	56.585	Scophthalmus_maximus
ENSCPBG00000025243	MRPS18A	100	56.701	ENSSDUG00000011655	mrps18a	100	56.701	Seriola_dumerili
ENSCPBG00000025243	MRPS18A	100	57.732	ENSSLDG00000025435	mrps18a	100	57.732	Seriola_lalandi_dorsalis
ENSCPBG00000025243	MRPS18A	100	72.165	ENSSPUG00000011517	MRPS18A	100	72.165	Sphenodon_punctatus
ENSCPBG00000025243	MRPS18A	100	54.808	ENSSPAG00000000034	mrps18a	100	54.808	Stegastes_partitus
ENSCPBG00000025243	MRPS18A	100	62.245	ENSSSCG00000001692	MRPS18A	100	62.245	Sus_scrofa
ENSCPBG00000025243	MRPS18A	76	83.562	ENSTGUG00000008142	MRPS18A	100	83.562	Taeniopygia_guttata
ENSCPBG00000025243	MRPS18A	85	65.455	ENSTRUG00000025134	mrps18a	79	65.455	Takifugu_rubripes
ENSCPBG00000025243	MRPS18A	84	66.463	ENSTNIG00000016302	mrps18a	79	66.463	Tetraodon_nigroviridis
ENSCPBG00000025243	MRPS18A	82	70.968	ENSTBEG00000004094	MRPS18A	71	70.968	Tupaia_belangeri
ENSCPBG00000025243	MRPS18A	81	74.713	ENSTTRG00000006354	MRPS18A	65	74.713	Tursiops_truncatus
ENSCPBG00000025243	MRPS18A	100	60.204	ENSUAMG00000013758	MRPS18A	100	60.204	Ursus_americanus
ENSCPBG00000025243	MRPS18A	100	60.204	ENSUMAG00000005910	MRPS18A	100	60.204	Ursus_maritimus
ENSCPBG00000025243	MRPS18A	78	52.318	ENSVVUG00000022444	-	75	52.318	Vulpes_vulpes
ENSCPBG00000025243	MRPS18A	100	62.755	ENSVVUG00000029092	-	100	62.755	Vulpes_vulpes
ENSCPBG00000025243	MRPS18A	74	60.544	ENSXETG00000003270	mrps18a	98	58.065	Xenopus_tropicalis
ENSCPBG00000025243	MRPS18A	100	58.763	ENSXCOG00000007223	mrps18a	100	58.763	Xiphophorus_couchianus
ENSCPBG00000025243	MRPS18A	100	58.763	ENSXMAG00000004867	mrps18a	100	58.763	Xiphophorus_maculatus