EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000025463 (Gene tree)
Gene ID: 101945389
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 173893 bases
Position: chr6:11770003-11943895
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036678	ResIII	PF04851.15	1.4e-08	1	1
ENSCPBP00000036677	ResIII	PF04851.15	1.6e-08	1	1
ENSCPBP00000036675	ResIII	PF04851.15	1.6e-08	1	1
ENSCPBP00000036676	ResIII	PF04851.15	1.6e-08	1	1
ENSCPBP00000036678	BRK	PF07533.16	1.8e-17	1	1
ENSCPBP00000036677	BRK	PF07533.16	2e-17	1	1
ENSCPBP00000036675	BRK	PF07533.16	2e-17	1	1
ENSCPBP00000036676	BRK	PF07533.16	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043013	SMARCA2-202	5308	-	ENSCPBP00000036676	1602 (aa)	-	-
ENSCPBT00000043012	SMARCA2-201	5064	-	ENSCPBP00000036675	1602 (aa)	-	-
ENSCPBT00000043015	SMARCA2-204	4419	-	ENSCPBP00000036678	1460 (aa)	-	-
ENSCPBT00000043014	SMARCA2-203	5699	-	ENSCPBP00000036677	1570 (aa)	XP_005296828	UPI000388BC4B

Gene Model

Click here to download ENSCPBG00000025463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000025463	SMARCA2	95	81.922	ENSCPBG00000009994	SMARCA4	96	76.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025463	SMARCA2	100	95.115	ENSG00000080503	SMARCA2	100	98.000	Homo_sapiens
ENSCPBG00000025463	SMARCA2	100	82.650	ENSAPOG00000002641	SMARCA2	97	80.643	Acanthochromis_polyacanthus
ENSCPBG00000025463	SMARCA2	86	95.465	ENSAMEG00000012325	SMARCA2	100	95.465	Ailuropoda_melanoleuca
ENSCPBG00000025463	SMARCA2	98	84.470	ENSACIG00000015607	SMARCA2	97	79.949	Amphilophus_citrinellus
ENSCPBG00000025463	SMARCA2	100	82.650	ENSAOCG00000009647	-	96	82.504	Amphiprion_ocellaris
ENSCPBG00000025463	SMARCA2	100	82.650	ENSAPEG00000007646	SMARCA2	96	82.430	Amphiprion_percula
ENSCPBG00000025463	SMARCA2	98	84.281	ENSATEG00000006916	SMARCA2	92	85.572	Anabas_testudineus
ENSCPBG00000025463	SMARCA2	98	86.074	ENSAPLG00000013873	SMARCA2	100	86.074	Anas_platyrhynchos
ENSCPBG00000025463	SMARCA2	100	93.439	ENSACAG00000002423	SMARCA2	100	93.248	Anolis_carolinensis
ENSCPBG00000025463	SMARCA2	100	95.344	ENSANAG00000026498	SMARCA2	100	91.858	Aotus_nancymaae
ENSCPBG00000025463	SMARCA2	97	85.572	ENSACLG00000004248	SMARCA2	97	80.245	Astatotilapia_calliptera
ENSCPBG00000025463	SMARCA2	100	82.489	ENSAMXG00000012404	smarca2	97	83.246	Astyanax_mexicanus
ENSCPBG00000025463	SMARCA2	100	91.384	ENSBTAG00000007494	SMARCA2	97	95.191	Bos_taurus
ENSCPBG00000025463	SMARCA2	99	95.609	ENSCJAG00000010710	SMARCA2	100	91.362	Callithrix_jacchus
ENSCPBG00000025463	SMARCA2	100	91.515	ENSCAFG00000002013	SMARCA2	97	95.267	Canis_familiaris
ENSCPBG00000025463	SMARCA2	80	95.193	ENSCAFG00020026802	SMARCA2	94	94.678	Canis_lupus_dingo
ENSCPBG00000025463	SMARCA2	100	91.384	ENSCHIG00000025863	SMARCA2	97	95.191	Capra_hircus
ENSCPBG00000025463	SMARCA2	99	95.253	ENSTSYG00000003858	SMARCA2	99	91.624	Carlito_syrichta
ENSCPBG00000025463	SMARCA2	99	88.604	ENSCAPG00000002890	SMARCA2	99	87.797	Cavia_aperea
ENSCPBG00000025463	SMARCA2	100	91.672	ENSCPOG00000005475	SMARCA2	100	90.886	Cavia_porcellus
ENSCPBG00000025463	SMARCA2	100	92.048	ENSCCAG00000030636	SMARCA2	100	91.985	Cebus_capucinus
ENSCPBG00000025463	SMARCA2	100	91.868	ENSCATG00000031470	SMARCA2	100	91.736	Cercocebus_atys
ENSCPBG00000025463	SMARCA2	100	95.133	ENSCLAG00000014484	SMARCA2	100	91.082	Chinchilla_lanigera
ENSCPBG00000025463	SMARCA2	94	92.517	ENSCSAG00000008650	SMARCA2	99	92.585	Chlorocebus_sabaeus
ENSCPBG00000025463	SMARCA2	85	87.436	ENSCHOG00000004316	SMARCA2	86	87.436	Choloepus_hoffmanni
ENSCPBG00000025463	SMARCA2	100	95.344	ENSCANG00000039597	SMARCA2	100	92.112	Colobus_angolensis_palliatus
ENSCPBG00000025463	SMARCA2	82	88.263	ENSCGRG00001002323	Smarca2	100	84.645	Cricetulus_griseus_chok1gshd
ENSCPBG00000025463	SMARCA2	97	81.033	ENSCSEG00000019311	SMARCA2	96	76.999	Cynoglossus_semilaevis
ENSCPBG00000025463	SMARCA2	83	82.979	ENSCVAG00000016571	SMARCA2	95	82.794	Cyprinodon_variegatus
ENSCPBG00000025463	SMARCA2	100	82.650	ENSDARG00000008904	smarca2	97	82.783	Danio_rerio
ENSCPBG00000025463	SMARCA2	100	91.228	ENSDNOG00000006402	SMARCA2	100	91.291	Dasypus_novemcinctus
ENSCPBG00000025463	SMARCA2	100	91.545	ENSDORG00000014832	Smarca2	100	91.492	Dipodomys_ordii
ENSCPBG00000025463	SMARCA2	85	59.626	FBgn0000212	brm	90	53.871	Drosophila_melanogaster
ENSCPBG00000025463	SMARCA2	94	70.678	ENSEBUG00000011442	-	93	70.317	Eptatretus_burgeri
ENSCPBG00000025463	SMARCA2	88	64.042	ENSEBUG00000002449	-	95	64.719	Eptatretus_burgeri
ENSCPBG00000025463	SMARCA2	100	91.515	ENSEASG00005010312	SMARCA2	97	95.420	Equus_asinus_asinus
ENSCPBG00000025463	SMARCA2	72	94.444	ENSEEUG00000015540	-	68	94.444	Erinaceus_europaeus
ENSCPBG00000025463	SMARCA2	92	81.658	ENSELUG00000010318	smarca2	96	79.860	Esox_lucius
ENSCPBG00000025463	SMARCA2	100	91.012	ENSFCAG00000001568	SMARCA2	97	94.885	Felis_catus
ENSCPBG00000025463	SMARCA2	100	95.541	ENSFALG00000010416	SMARCA2	100	95.748	Ficedula_albicollis
ENSCPBG00000025463	SMARCA2	99	94.559	ENSFDAG00000010502	SMARCA2	100	88.840	Fukomys_damarensis
ENSCPBG00000025463	SMARCA2	100	84.039	ENSFHEG00000021250	SMARCA2	99	82.140	Fundulus_heteroclitus
ENSCPBG00000025463	SMARCA2	98	77.384	ENSGMOG00000014229	SMARCA2	97	77.523	Gadus_morhua
ENSCPBG00000025463	SMARCA2	100	96.051	ENSGALG00000010164	SMARCA2	100	96.051	Gallus_gallus
ENSCPBG00000025463	SMARCA2	88	96.667	ENSGAFG00000001164	SMARCA2	89	96.667	Gambusia_affinis
ENSCPBG00000025463	SMARCA2	98	82.135	ENSGACG00000014488	SMARCA2	97	79.191	Gasterosteus_aculeatus
ENSCPBG00000025463	SMARCA2	100	99.745	ENSGAGG00000024412	SMARCA2	100	99.745	Gopherus_agassizii
ENSCPBG00000025463	SMARCA2	100	87.733	ENSGGOG00000000513	SMARCA2	100	86.542	Gorilla_gorilla
ENSCPBG00000025463	SMARCA2	100	83.004	ENSHBUG00000006691	SMARCA2	97	80.873	Haplochromis_burtoni
ENSCPBG00000025463	SMARCA2	99	94.943	ENSHGLG00000005215	SMARCA2	94	94.669	Heterocephalus_glaber_female
ENSCPBG00000025463	SMARCA2	100	91.725	ENSHGLG00100010496	SMARCA2	100	91.233	Heterocephalus_glaber_male
ENSCPBG00000025463	SMARCA2	80	85.968	ENSHCOG00000015348	-	88	85.686	Hippocampus_comes
ENSCPBG00000025463	SMARCA2	99	82.473	ENSIPUG00000011060	smarca2	96	82.080	Ictalurus_punctatus
ENSCPBG00000025463	SMARCA2	99	95.242	ENSSTOG00000006812	SMARCA2	100	91.041	Ictidomys_tridecemlineatus
ENSCPBG00000025463	SMARCA2	99	95.542	ENSJJAG00000010867	Smarca2	100	91.233	Jaculus_jaculus
ENSCPBG00000025463	SMARCA2	100	83.531	ENSKMAG00000015844	-	98	80.089	Kryptolebias_marmoratus
ENSCPBG00000025463	SMARCA2	98	84.463	ENSLOCG00000011499	smarca2	100	84.476	Lepisosteus_oculatus
ENSCPBG00000025463	SMARCA2	100	90.314	ENSLAFG00000014061	SMARCA2	100	90.503	Loxodonta_africana
ENSCPBG00000025463	SMARCA2	100	90.063	ENSMFAG00000003814	SMARCA2	100	91.592	Macaca_fascicularis
ENSCPBG00000025463	SMARCA2	100	92.176	ENSMMUG00000015279	SMARCA2	100	92.239	Macaca_mulatta
ENSCPBG00000025463	SMARCA2	100	91.550	ENSMNEG00000041069	SMARCA2	100	91.804	Macaca_nemestrina
ENSCPBG00000025463	SMARCA2	100	86.198	ENSMLEG00000027418	SMARCA2	100	90.064	Mandrillus_leucophaeus
ENSCPBG00000025463	SMARCA2	100	83.959	ENSMAMG00000003056	SMARCA2	98	80.649	Mastacembelus_armatus
ENSCPBG00000025463	SMARCA2	100	83.077	ENSMZEG00005020709	SMARCA2	97	81.093	Maylandia_zebra
ENSCPBG00000025463	SMARCA2	77	78.220	ENSMGAG00000005160	-	100	78.353	Meleagris_gallopavo
ENSCPBG00000025463	SMARCA2	100	92.176	ENSMICG00000005162	SMARCA2	100	92.239	Microcebus_murinus
ENSCPBG00000025463	SMARCA2	100	94.970	ENSMOCG00000001611	Smarca2	100	91.100	Microtus_ochrogaster
ENSCPBG00000025463	SMARCA2	97	82.676	ENSMMOG00000014196	SMARCA2	93	81.909	Mola_mola
ENSCPBG00000025463	SMARCA2	100	95.481	ENSMODG00000003578	SMARCA2	100	95.481	Monodelphis_domestica
ENSCPBG00000025463	SMARCA2	99	79.974	ENSMALG00000009611	SMARCA2	96	80.369	Monopterus_albus
ENSCPBG00000025463	SMARCA2	100	94.970	MGP_CAROLIEiJ_G0022841	Smarca2	100	90.245	Mus_caroli
ENSCPBG00000025463	SMARCA2	100	94.885	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSCPBG00000025463	SMARCA2	100	94.809	MGP_PahariEiJ_G0014334	Smarca2	100	90.221	Mus_pahari
ENSCPBG00000025463	SMARCA2	100	94.809	MGP_SPRETEiJ_G0023759	Smarca2	97	100.000	Mus_spretus
ENSCPBG00000025463	SMARCA2	87	95.320	ENSMPUG00000005171	SMARCA2	94	95.320	Mustela_putorius_furo
ENSCPBG00000025463	SMARCA2	99	87.366	ENSMLUG00000002342	SMARCA2	99	87.127	Myotis_lucifugus
ENSCPBG00000025463	SMARCA2	99	89.748	ENSNGAG00000000108	Smarca2	99	89.853	Nannospalax_galili
ENSCPBG00000025463	SMARCA2	92	73.597	ENSNBRG00000017998	SMARCA2	89	90.110	Neolamprologus_brichardi
ENSCPBG00000025463	SMARCA2	100	87.027	ENSNLEG00000008575	SMARCA2	100	90.070	Nomascus_leucogenys
ENSCPBG00000025463	SMARCA2	100	85.579	ENSMEUG00000009812	SMARCA2	100	85.705	Notamacropus_eugenii
ENSCPBG00000025463	SMARCA2	99	89.450	ENSOPRG00000013474	SMARCA2	100	86.464	Ochotona_princeps
ENSCPBG00000025463	SMARCA2	99	94.279	ENSODEG00000005452	SMARCA2	98	90.455	Octodon_degus
ENSCPBG00000025463	SMARCA2	98	83.997	ENSONIG00000014163	SMARCA2	96	80.633	Oreochromis_niloticus
ENSCPBG00000025463	SMARCA2	53	93.846	ENSOANG00000008299	-	95	98.381	Ornithorhynchus_anatinus
ENSCPBG00000025463	SMARCA2	100	94.954	ENSOCUG00000006320	SMARCA2	100	91.461	Oryctolagus_cuniculus
ENSCPBG00000025463	SMARCA2	100	83.024	ENSORLG00000020820	SMARCA2	100	79.712	Oryzias_latipes
ENSCPBG00000025463	SMARCA2	100	83.024	ENSORLG00015006289	SMARCA2	97	91.310	Oryzias_latipes_hsok
ENSCPBG00000025463	SMARCA2	100	83.445	ENSOMEG00000009736	-	100	80.252	Oryzias_melastigma
ENSCPBG00000025463	SMARCA2	99	96.367	ENSOGAG00000017053	SMARCA2	99	88.952	Otolemur_garnettii
ENSCPBG00000025463	SMARCA2	100	96.060	ENSOARG00000013265	SMARCA2	100	89.724	Ovis_aries
ENSCPBG00000025463	SMARCA2	100	88.454	ENSPPAG00000038717	SMARCA2	100	88.708	Pan_paniscus
ENSCPBG00000025463	SMARCA2	100	91.075	ENSPPRG00000001879	SMARCA2	97	94.962	Panthera_pardus
ENSCPBG00000025463	SMARCA2	100	92.766	ENSPTRG00000051168	SMARCA2	100	92.766	Pan_troglodytes
ENSCPBG00000025463	SMARCA2	100	88.829	ENSPANG00000025121	SMARCA2	100	85.331	Papio_anubis
ENSCPBG00000025463	SMARCA2	100	84.415	ENSPKIG00000018469	-	100	83.651	Paramormyrops_kingsleyae
ENSCPBG00000025463	SMARCA2	100	98.156	ENSPSIG00000006284	SMARCA2	100	98.156	Pelodiscus_sinensis
ENSCPBG00000025463	SMARCA2	98	73.678	ENSPMGG00000013696	-	96	74.788	Periophthalmus_magnuspinnatus
ENSCPBG00000025463	SMARCA2	100	94.275	ENSPEMG00000019821	Smarca2	100	90.032	Peromyscus_maniculatus_bairdii
ENSCPBG00000025463	SMARCA2	94	73.389	ENSPMAG00000005337	-	94	73.009	Petromyzon_marinus
ENSCPBG00000025463	SMARCA2	100	95.481	ENSPCIG00000015658	SMARCA2	100	95.481	Phascolarctos_cinereus
ENSCPBG00000025463	SMARCA2	100	83.519	ENSPFOG00000001856	SMARCA2	96	82.563	Poecilia_formosa
ENSCPBG00000025463	SMARCA2	98	83.837	ENSPLAG00000017829	SMARCA2	94	81.427	Poecilia_latipinna
ENSCPBG00000025463	SMARCA2	98	83.610	ENSPMEG00000001815	-	95	82.612	Poecilia_mexicana
ENSCPBG00000025463	SMARCA2	100	83.519	ENSPREG00000013800	SMARCA2	95	82.836	Poecilia_reticulata
ENSCPBG00000025463	SMARCA2	100	94.809	ENSPPYG00000019258	SMARCA2	100	91.539	Pongo_abelii
ENSCPBG00000025463	SMARCA2	79	78.947	ENSPCAG00000016969	SMARCA2	78	78.947	Procavia_capensis
ENSCPBG00000025463	SMARCA2	100	90.019	ENSPCOG00000025709	SMARCA2	100	89.828	Propithecus_coquereli
ENSCPBG00000025463	SMARCA2	95	90.230	ENSPVAG00000000901	SMARCA2	94	91.853	Pteropus_vampyrus
ENSCPBG00000025463	SMARCA2	100	80.147	ENSPNYG00000004533	SMARCA2	97	78.525	Pundamilia_nyererei
ENSCPBG00000025463	SMARCA2	99	83.939	ENSPNAG00000014635	smarca2	95	84.052	Pygocentrus_nattereri
ENSCPBG00000025463	SMARCA2	100	93.675	ENSRNOG00000011931	Smarca2	100	89.174	Rattus_norvegicus
ENSCPBG00000025463	SMARCA2	100	94.091	ENSRBIG00000038618	SMARCA2	95	96.708	Rhinopithecus_bieti
ENSCPBG00000025463	SMARCA2	100	94.234	ENSRROG00000019271	SMARCA2	99	92.203	Rhinopithecus_roxellana
ENSCPBG00000025463	SMARCA2	100	96.276	ENSSBOG00000034827	SMARCA2	100	90.754	Saimiri_boliviensis_boliviensis
ENSCPBG00000025463	SMARCA2	100	94.271	ENSSHAG00000007884	SMARCA2	100	94.017	Sarcophilus_harrisii
ENSCPBG00000025463	SMARCA2	91	84.362	ENSSFOG00015014870	SMARCA2	97	85.296	Scleropages_formosus
ENSCPBG00000025463	SMARCA2	99	84.211	ENSSMAG00000013707	SMARCA2	98	84.361	Scophthalmus_maximus
ENSCPBG00000025463	SMARCA2	100	83.517	ENSSDUG00000008852	-	98	79.300	Seriola_dumerili
ENSCPBG00000025463	SMARCA2	96	84.621	ENSSLDG00000025449	SMARCA2	96	79.477	Seriola_lalandi_dorsalis
ENSCPBG00000025463	SMARCA2	95	89.080	ENSSARG00000007888	SMARCA2	94	89.080	Sorex_araneus
ENSCPBG00000025463	SMARCA2	98	91.412	ENSSPUG00000001629	SMARCA2	98	93.387	Sphenodon_punctatus
ENSCPBG00000025463	SMARCA2	100	83.236	ENSSPAG00000020091	-	97	80.821	Stegastes_partitus
ENSCPBG00000025463	SMARCA2	100	91.321	ENSSSCG00000005232	SMARCA2	100	92.048	Sus_scrofa
ENSCPBG00000025463	SMARCA2	100	94.331	ENSTGUG00000005460	SMARCA2	100	94.204	Taeniopygia_guttata
ENSCPBG00000025463	SMARCA2	98	82.687	ENSTRUG00000015619	SMARCA2	96	79.779	Takifugu_rubripes
ENSCPBG00000025463	SMARCA2	69	100.000	ENSTBEG00000008767	SMARCA2	69	100.000	Tupaia_belangeri
ENSCPBG00000025463	SMARCA2	95	90.826	ENSTTRG00000002033	SMARCA2	95	91.573	Tursiops_truncatus
ENSCPBG00000025463	SMARCA2	89	91.214	ENSUAMG00000024701	SMARCA2	96	94.273	Ursus_americanus
ENSCPBG00000025463	SMARCA2	91	83.676	ENSVPAG00000001204	SMARCA2	99	83.676	Vicugna_pacos
ENSCPBG00000025463	SMARCA2	80	94.940	ENSVVUG00000004598	SMARCA2	96	94.511	Vulpes_vulpes
ENSCPBG00000025463	SMARCA2	100	84.777	ENSXETG00000015299	smarca2	100	84.777	Xenopus_tropicalis
ENSCPBG00000025463	SMARCA2	88	84.173	ENSXCOG00000011073	SMARCA2	95	82.445	Xiphophorus_couchianus
ENSCPBG00000025463	SMARCA2	100	83.445	ENSXMAG00000015611	SMARCA2	99	78.903	Xiphophorus_maculatus