EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025470 (Gene tree)
Gene ID: 101948587
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 37288 bases
Position: chr6:12254663-12291950
Accession: 29676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036684	CPL	PF08144.11	5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043026	PUM3-201	2888	-	ENSCPBP00000036684	668 (aa)	XP_005296834	UPI00046C1898

Gene Model

Click here to download ENSCPBG00000025470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025470	PUM3	95	72.994	ENSG00000080608	PUM3	100	72.994	Homo_sapiens
ENSCPBG00000025470	PUM3	95	55.789	ENSAPOG00000020252	pum3	96	57.895	Acanthochromis_polyacanthus
ENSCPBG00000025470	PUM3	92	73.016	ENSAMEG00000012187	PUM3	100	72.798	Ailuropoda_melanoleuca
ENSCPBG00000025470	PUM3	82	56.962	ENSACIG00000009786	pum3	86	58.269	Amphilophus_citrinellus
ENSCPBG00000025470	PUM3	95	56.090	ENSAOCG00000004439	pum3	96	57.735	Amphiprion_ocellaris
ENSCPBG00000025470	PUM3	95	56.090	ENSAPEG00000020523	pum3	96	57.735	Amphiprion_percula
ENSCPBG00000025470	PUM3	80	63.415	ENSATEG00000005799	pum3	96	57.277	Anabas_testudineus
ENSCPBG00000025470	PUM3	91	80.998	ENSAPLG00000002920	PUM3	100	80.998	Anas_platyrhynchos
ENSCPBG00000025470	PUM3	88	78.173	ENSACAG00000003174	PUM3	99	78.173	Anolis_carolinensis
ENSCPBG00000025470	PUM3	95	72.798	ENSANAG00000024520	PUM3	100	72.798	Aotus_nancymaae
ENSCPBG00000025470	PUM3	95	55.878	ENSACLG00000001017	pum3	99	55.267	Astatotilapia_calliptera
ENSCPBG00000025470	PUM3	95	63.777	ENSAMXG00000020911	pum3	100	63.777	Astyanax_mexicanus
ENSCPBG00000025470	PUM3	92	73.016	ENSBTAG00000013357	PUM3	100	72.643	Bos_taurus
ENSCPBG00000025470	PUM3	73	31.791	WBGene00014165	puf-12	64	31.791	Caenorhabditis_elegans
ENSCPBG00000025470	PUM3	95	72.952	ENSCJAG00000010917	PUM3	100	72.952	Callithrix_jacchus
ENSCPBG00000025470	PUM3	92	72.540	ENSCAFG00000002035	PUM3	99	72.179	Canis_familiaris
ENSCPBG00000025470	PUM3	92	72.381	ENSCAFG00020026867	PUM3	99	72.025	Canis_lupus_dingo
ENSCPBG00000025470	PUM3	92	72.857	ENSCHIG00000021559	PUM3	100	72.488	Capra_hircus
ENSCPBG00000025470	PUM3	95	72.488	ENSTSYG00000007481	PUM3	100	72.488	Carlito_syrichta
ENSCPBG00000025470	PUM3	95	69.753	ENSCAPG00000010592	-	99	69.753	Cavia_aperea
ENSCPBG00000025470	PUM3	95	70.943	ENSCPOG00000008552	-	99	70.943	Cavia_porcellus
ENSCPBG00000025470	PUM3	95	72.643	ENSCCAG00000032650	PUM3	100	72.643	Cebus_capucinus
ENSCPBG00000025470	PUM3	99	71.726	ENSCATG00000024880	PUM3	100	73.261	Cercocebus_atys
ENSCPBG00000025470	PUM3	95	72.643	ENSCLAG00000011892	PUM3	99	72.643	Chinchilla_lanigera
ENSCPBG00000025470	PUM3	95	73.725	ENSCSAG00000008691	PUM3	100	73.725	Chlorocebus_sabaeus
ENSCPBG00000025470	PUM3	95	56.549	ENSCHOG00000002535	PUM3	96	56.549	Choloepus_hoffmanni
ENSCPBG00000025470	PUM3	82	40.000	ENSCING00000024199	-	87	41.548	Ciona_intestinalis
ENSCPBG00000025470	PUM3	77	40.952	ENSCSAVG00000006072	-	99	40.649	Ciona_savignyi
ENSCPBG00000025470	PUM3	95	73.416	ENSCANG00000006142	PUM3	100	73.416	Colobus_angolensis_palliatus
ENSCPBG00000025470	PUM3	95	72.334	ENSCGRG00001016402	Pum3	99	72.334	Cricetulus_griseus_chok1gshd
ENSCPBG00000025470	PUM3	95	72.334	ENSCGRG00000010207	Pum3	99	72.334	Cricetulus_griseus_crigri
ENSCPBG00000025470	PUM3	76	60.735	ENSCSEG00000001565	pum3	99	57.366	Cynoglossus_semilaevis
ENSCPBG00000025470	PUM3	67	54.275	ENSCVAG00000006550	pum3	99	54.275	Cyprinodon_variegatus
ENSCPBG00000025470	PUM3	95	63.566	ENSDARG00000087779	pum3	100	61.860	Danio_rerio
ENSCPBG00000025470	PUM3	95	63.804	ENSDNOG00000008157	PUM3	70	64.154	Dasypus_novemcinctus
ENSCPBG00000025470	PUM3	79	72.865	ENSETEG00000015331	PUM3	81	72.865	Echinops_telfairi
ENSCPBG00000025470	PUM3	77	41.031	ENSEBUG00000011586	pum3	75	41.782	Eptatretus_burgeri
ENSCPBG00000025470	PUM3	92	73.333	ENSEASG00005010350	PUM3	100	73.107	Equus_asinus_asinus
ENSCPBG00000025470	PUM3	92	73.333	ENSECAG00000017193	PUM3	100	73.107	Equus_caballus
ENSCPBG00000025470	PUM3	85	67.182	ENSEEUG00000010314	PUM3	100	66.833	Erinaceus_europaeus
ENSCPBG00000025470	PUM3	94	62.401	ENSELUG00000002215	pum3	97	62.401	Esox_lucius
ENSCPBG00000025470	PUM3	95	81.221	ENSFALG00000010509	PUM3	100	81.221	Ficedula_albicollis
ENSCPBG00000025470	PUM3	95	71.870	ENSFDAG00000021027	PUM3	99	71.870	Fukomys_damarensis
ENSCPBG00000025470	PUM3	76	62.205	ENSFHEG00000015576	pum3	99	62.205	Fundulus_heteroclitus
ENSCPBG00000025470	PUM3	80	60.487	ENSGMOG00000014217	pum3	97	60.653	Gadus_morhua
ENSCPBG00000025470	PUM3	95	79.937	ENSGALG00000010178	PUM3	100	79.937	Gallus_gallus
ENSCPBG00000025470	PUM3	53	63.712	ENSGAFG00000001930	pum3	62	63.712	Gambusia_affinis
ENSCPBG00000025470	PUM3	79	60.902	ENSGACG00000017878	pum3	95	61.464	Gasterosteus_aculeatus
ENSCPBG00000025470	PUM3	95	96.535	ENSGAGG00000018983	PUM3	100	96.535	Gopherus_agassizii
ENSCPBG00000025470	PUM3	95	73.261	ENSGGOG00000006143	PUM3	100	73.261	Gorilla_gorilla
ENSCPBG00000025470	PUM3	95	50.394	ENSHBUG00000012903	pum3	80	57.968	Haplochromis_burtoni
ENSCPBG00000025470	PUM3	95	73.107	ENSHGLG00000015868	-	99	73.107	Heterocephalus_glaber_female
ENSCPBG00000025470	PUM3	95	73.107	ENSHGLG00100018825	PUM3	100	73.107	Heterocephalus_glaber_male
ENSCPBG00000025470	PUM3	94	55.573	ENSHCOG00000010306	pum3	96	53.731	Hippocampus_comes
ENSCPBG00000025470	PUM3	84	67.376	ENSIPUG00000024801	pum3	100	62.809	Ictalurus_punctatus
ENSCPBG00000025470	PUM3	95	72.798	ENSSTOG00000009586	PUM3	99	72.798	Ictidomys_tridecemlineatus
ENSCPBG00000025470	PUM3	95	70.743	ENSJJAG00000012563	Pum3	99	70.233	Jaculus_jaculus
ENSCPBG00000025470	PUM3	95	57.012	ENSKMAG00000010277	pum3	99	55.860	Kryptolebias_marmoratus
ENSCPBG00000025470	PUM3	95	55.775	ENSLBEG00000012213	pum3	99	55.183	Labrus_bergylta
ENSCPBG00000025470	PUM3	95	71.295	ENSLACG00000008312	PUM3	100	71.451	Latimeria_chalumnae
ENSCPBG00000025470	PUM3	95	67.293	ENSLOCG00000012529	pum3	99	65.674	Lepisosteus_oculatus
ENSCPBG00000025470	PUM3	92	71.746	ENSLAFG00000017341	PUM3	99	71.783	Loxodonta_africana
ENSCPBG00000025470	PUM3	95	73.261	ENSMFAG00000001430	PUM3	100	73.261	Macaca_fascicularis
ENSCPBG00000025470	PUM3	96	72.409	ENSMMUG00000002362	PUM3	100	72.409	Macaca_mulatta
ENSCPBG00000025470	PUM3	95	73.261	ENSMNEG00000035288	PUM3	100	73.261	Macaca_nemestrina
ENSCPBG00000025470	PUM3	95	73.416	ENSMLEG00000034820	PUM3	100	73.416	Mandrillus_leucophaeus
ENSCPBG00000025470	PUM3	81	62.069	ENSMAMG00000022861	pum3	96	57.348	Mastacembelus_armatus
ENSCPBG00000025470	PUM3	95	55.896	ENSMZEG00005014205	pum3	97	55.283	Maylandia_zebra
ENSCPBG00000025470	PUM3	94	70.353	ENSMGAG00000002255	PUM3	100	72.183	Meleagris_gallopavo
ENSCPBG00000025470	PUM3	95	72.488	ENSMAUG00000009733	Pum3	99	72.488	Mesocricetus_auratus
ENSCPBG00000025470	PUM3	95	72.923	ENSMICG00000045916	PUM3	87	72.923	Microcebus_murinus
ENSCPBG00000025470	PUM3	95	72.334	ENSMOCG00000019519	-	99	72.334	Microtus_ochrogaster
ENSCPBG00000025470	PUM3	95	68.934	ENSMOCG00000014830	-	100	68.111	Microtus_ochrogaster
ENSCPBG00000025470	PUM3	94	52.472	ENSMMOG00000012184	pum3	99	52.077	Mola_mola
ENSCPBG00000025470	PUM3	95	72.432	ENSMODG00000015417	PUM3	93	72.432	Monodelphis_domestica
ENSCPBG00000025470	PUM3	95	55.046	ENSMALG00000022164	pum3	92	55.365	Monopterus_albus
ENSCPBG00000025470	PUM3	95	71.186	MGP_CAROLIEiJ_G0022845	Pum3	99	71.957	Mus_caroli
ENSCPBG00000025470	PUM3	95	71.032	ENSMUSG00000041360	Pum3	99	71.803	Mus_musculus
ENSCPBG00000025470	PUM3	95	71.827	MGP_PahariEiJ_G0014338	Pum3	99	71.827	Mus_pahari
ENSCPBG00000025470	PUM3	95	71.032	MGP_SPRETEiJ_G0023763	Pum3	99	71.803	Mus_spretus
ENSCPBG00000025470	PUM3	92	71.270	ENSMPUG00000005125	PUM3	100	71.097	Mustela_putorius_furo
ENSCPBG00000025470	PUM3	95	71.672	ENSMLUG00000002309	PUM3	99	71.672	Myotis_lucifugus
ENSCPBG00000025470	PUM3	95	69.077	ENSNGAG00000019468	Pum3	100	69.337	Nannospalax_galili
ENSCPBG00000025470	PUM3	81	57.692	ENSNBRG00000021370	pum3	79	60.956	Neolamprologus_brichardi
ENSCPBG00000025470	PUM3	95	73.107	ENSNLEG00000008712	PUM3	100	73.107	Nomascus_leucogenys
ENSCPBG00000025470	PUM3	74	56.187	ENSMEUG00000013606	-	98	56.187	Notamacropus_eugenii
ENSCPBG00000025470	PUM3	72	62.791	ENSOPRG00000004225	-	79	62.791	Ochotona_princeps
ENSCPBG00000025470	PUM3	95	71.716	ENSODEG00000003625	-	99	71.716	Octodon_degus
ENSCPBG00000025470	PUM3	95	66.769	ENSODEG00000016477	-	100	66.769	Octodon_degus
ENSCPBG00000025470	PUM3	95	55.640	ENSONIG00000012733	pum3	99	54.642	Oreochromis_niloticus
ENSCPBG00000025470	PUM3	79	75.332	ENSOANG00000014995	PUM3	97	75.332	Ornithorhynchus_anatinus
ENSCPBG00000025470	PUM3	94	71.739	ENSOCUG00000026104	-	100	71.739	Oryctolagus_cuniculus
ENSCPBG00000025470	PUM3	95	72.025	ENSOCUG00000004189	-	100	72.025	Oryctolagus_cuniculus
ENSCPBG00000025470	PUM3	91	55.882	ENSORLG00000014935	pum3	98	52.851	Oryzias_latipes
ENSCPBG00000025470	PUM3	91	55.882	ENSORLG00020002841	pum3	98	53.385	Oryzias_latipes_hni
ENSCPBG00000025470	PUM3	95	53.918	ENSORLG00015015906	pum3	97	54.310	Oryzias_latipes_hsok
ENSCPBG00000025470	PUM3	89	55.872	ENSOMEG00000009427	pum3	98	53.846	Oryzias_melastigma
ENSCPBG00000025470	PUM3	95	72.840	ENSOGAG00000008125	-	100	72.840	Otolemur_garnettii
ENSCPBG00000025470	PUM3	94	55.850	ENSOGAG00000033481	-	99	55.850	Otolemur_garnettii
ENSCPBG00000025470	PUM3	92	72.468	ENSOARG00000013337	PUM3	100	72.111	Ovis_aries
ENSCPBG00000025470	PUM3	95	73.148	ENSPPAG00000041337	PUM3	100	73.148	Pan_paniscus
ENSCPBG00000025470	PUM3	95	71.097	ENSPPRG00000000809	PUM3	100	71.097	Panthera_pardus
ENSCPBG00000025470	PUM3	95	71.406	ENSPTIG00000021934	PUM3	100	71.406	Panthera_tigris_altaica
ENSCPBG00000025470	PUM3	95	73.302	ENSPTRG00000020735	PUM3	100	73.302	Pan_troglodytes
ENSCPBG00000025470	PUM3	95	73.725	ENSPANG00000025118	PUM3	100	73.725	Papio_anubis
ENSCPBG00000025470	PUM3	95	64.055	ENSPKIG00000022249	pum3	98	65.225	Paramormyrops_kingsleyae
ENSCPBG00000025470	PUM3	95	91.167	ENSPSIG00000016272	PUM3	100	91.167	Pelodiscus_sinensis
ENSCPBG00000025470	PUM3	74	60.852	ENSPMGG00000021261	pum3	99	60.852	Periophthalmus_magnuspinnatus
ENSCPBG00000025470	PUM3	85	68.142	ENSPEMG00000019340	-	100	68.142	Peromyscus_maniculatus_bairdii
ENSCPBG00000025470	PUM3	86	73.647	ENSPCIG00000030598	PUM3	77	73.391	Phascolarctos_cinereus
ENSCPBG00000025470	PUM3	91	57.541	ENSPFOG00000001719	pum3	99	55.608	Poecilia_formosa
ENSCPBG00000025470	PUM3	95	55.487	ENSPLAG00000020010	pum3	99	54.977	Poecilia_latipinna
ENSCPBG00000025470	PUM3	95	55.641	ENSPMEG00000017451	pum3	99	55.487	Poecilia_mexicana
ENSCPBG00000025470	PUM3	95	73.879	ENSPPYG00000019255	PUM3	100	73.879	Pongo_abelii
ENSCPBG00000025470	PUM3	95	63.369	ENSPCAG00000005797	PUM3	95	63.369	Procavia_capensis
ENSCPBG00000025470	PUM3	95	73.725	ENSPCOG00000027325	PUM3	100	73.725	Propithecus_coquereli
ENSCPBG00000025470	PUM3	95	70.462	ENSPVAG00000016135	PUM3	95	70.462	Pteropus_vampyrus
ENSCPBG00000025470	PUM3	95	55.725	ENSPNYG00000016124	pum3	99	55.115	Pundamilia_nyererei
ENSCPBG00000025470	PUM3	95	62.617	ENSPNAG00000026524	pum3	100	62.617	Pygocentrus_nattereri
ENSCPBG00000025470	PUM3	95	70.943	ENSRNOG00000012574	Pum3	100	70.943	Rattus_norvegicus
ENSCPBG00000025470	PUM3	95	70.634	ENSRNOG00000048356	RGD1308750	100	70.634	Rattus_norvegicus
ENSCPBG00000025470	PUM3	99	71.875	ENSRBIG00000036924	PUM3	100	73.261	Rhinopithecus_bieti
ENSCPBG00000025470	PUM3	95	73.416	ENSRROG00000041089	PUM3	100	73.416	Rhinopithecus_roxellana
ENSCPBG00000025470	PUM3	95	73.107	ENSSBOG00000028066	PUM3	100	73.107	Saimiri_boliviensis_boliviensis
ENSCPBG00000025470	PUM3	95	72.175	ENSSHAG00000003730	PUM3	100	71.605	Sarcophilus_harrisii
ENSCPBG00000025470	PUM3	95	63.411	ENSSFOG00015018778	pum3	99	63.411	Scleropages_formosus
ENSCPBG00000025470	PUM3	79	62.453	ENSSMAG00000013236	pum3	99	55.828	Scophthalmus_maximus
ENSCPBG00000025470	PUM3	83	60.000	ENSSDUG00000001887	pum3	99	55.422	Seriola_dumerili
ENSCPBG00000025470	PUM3	95	55.775	ENSSLDG00000015766	pum3	99	55.825	Seriola_lalandi_dorsalis
ENSCPBG00000025470	PUM3	90	69.968	ENSSARG00000000579	PUM3	99	69.968	Sorex_araneus
ENSCPBG00000025470	PUM3	92	79.085	ENSSPUG00000001707	PUM3	99	78.515	Sphenodon_punctatus
ENSCPBG00000025470	PUM3	95	56.279	ENSSPAG00000003976	pum3	99	55.692	Stegastes_partitus
ENSCPBG00000025470	PUM3	92	73.333	ENSSSCG00000005227	PUM3	99	73.107	Sus_scrofa
ENSCPBG00000025470	PUM3	95	81.230	ENSTGUG00000005339	PUM3	100	81.230	Taeniopygia_guttata
ENSCPBG00000025470	PUM3	95	54.887	ENSTRUG00000004074	pum3	99	54.436	Takifugu_rubripes
ENSCPBG00000025470	PUM3	85	60.839	ENSTNIG00000010325	pum3	97	59.038	Tetraodon_nigroviridis
ENSCPBG00000025470	PUM3	79	59.848	ENSTBEG00000013058	PUM3	81	59.848	Tupaia_belangeri
ENSCPBG00000025470	PUM3	92	65.873	ENSTTRG00000001062	PUM3	99	64.275	Tursiops_truncatus
ENSCPBG00000025470	PUM3	92	65.397	ENSUMAG00000018443	PUM3	99	71.157	Ursus_maritimus
ENSCPBG00000025470	PUM3	95	72.643	ENSVPAG00000010766	PUM3	99	72.643	Vicugna_pacos
ENSCPBG00000025470	PUM3	92	72.698	ENSVVUG00000006527	PUM3	99	72.334	Vulpes_vulpes
ENSCPBG00000025470	PUM3	95	60.000	ENSXETG00000011707	pum3	99	60.372	Xenopus_tropicalis
ENSCPBG00000025470	PUM3	80	59.815	ENSXCOG00000006725	pum3	87	60.038	Xiphophorus_couchianus
ENSCPBG00000025470	PUM3	90	56.487	ENSXMAG00000002926	pum3	99	55.063	Xiphophorus_maculatus