EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000025471 (Gene tree)
Gene ID: 101949585
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 126112 bases
Position: chr6:12314304-12440415
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036686	MTS	PF05175.14	9.7e-06	1	1
ENSCPBP00000036685	MTS	PF05175.14	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043027	-	1966	XM_005296782	ENSCPBP00000036685	511 (aa)	XP_005296839	UPI000388AE1B
ENSCPBT00000043028	-	1840	XM_024103346	ENSCPBP00000036686	469 (aa)	XP_023959114	UPI000CE659B4

Gene Model

Click here to download ENSCPBG00000025471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000025471	-	66	36.137	ENSCPBG00000014034	PRMT3	54	36.137
ENSCPBG00000025471	-	59	33.566	ENSCPBG00000006644	PRMT1	76	34.926
ENSCPBG00000025471	-	78	76.164	ENSCPBG00000010065	CARM1	88	74.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025471	-	80	61.671	ENSAPOG00000020684	carm1l	88	61.671	Acanthochromis_polyacanthus
ENSCPBG00000025471	-	80	61.314	ENSACIG00000024292	-	95	60.714	Amphilophus_citrinellus
ENSCPBG00000025471	-	74	67.826	ENSAOCG00000016803	carm1l	90	63.476	Amphiprion_ocellaris
ENSCPBG00000025471	-	82	61.905	ENSAPEG00000011757	carm1l	90	61.905	Amphiprion_percula
ENSCPBG00000025471	-	90	88.261	ENSACAG00000003227	-	100	88.261	Anolis_carolinensis
ENSCPBG00000025471	-	88	57.474	ENSACLG00000009998	-	96	57.474	Astatotilapia_calliptera
ENSCPBG00000025471	-	90	67.316	ENSAMXG00000020903	carm1l	100	67.316	Astyanax_mexicanus
ENSCPBG00000025471	-	67	91.456	ENSCAFG00000002042	-	100	91.456	Canis_familiaris
ENSCPBG00000025471	-	88	69.042	ENSDARG00000091531	carm1l	98	69.731	Danio_rerio
ENSCPBG00000025471	-	88	85.491	ENSEASG00005010358	-	97	85.491	Equus_asinus_asinus
ENSCPBG00000025471	-	88	85.778	ENSECAG00000009736	-	97	85.778	Equus_caballus
ENSCPBG00000025471	-	99	98.431	ENSGAGG00000021536	-	100	98.431	Gopherus_agassizii
ENSCPBG00000025471	-	75	67.521	ENSHBUG00000022386	-	89	63.300	Haplochromis_burtoni
ENSCPBG00000025471	-	88	78.000	ENSHGLG00000019207	-	97	78.000	Heterocephalus_glaber_female
ENSCPBG00000025471	-	83	72.275	ENSIPUG00000024779	co-prmt	96	73.515	Ictalurus_punctatus
ENSCPBG00000025471	-	90	72.078	ENSLOCG00000012543	carm1l	99	72.078	Lepisosteus_oculatus
ENSCPBG00000025471	-	80	61.408	ENSMAMG00000000357	carm1l	93	61.408	Mastacembelus_armatus
ENSCPBG00000025471	-	75	67.236	ENSMZEG00005021030	-	98	63.819	Maylandia_zebra
ENSCPBG00000025471	-	88	83.742	ENSMICG00000029542	-	97	83.742	Microcebus_murinus
ENSCPBG00000025471	-	77	90.000	ENSMLUG00000022735	-	100	89.751	Myotis_lucifugus
ENSCPBG00000025471	-	80	60.391	ENSNBRG00000013194	-	95	60.391	Neolamprologus_brichardi
ENSCPBG00000025471	-	93	58.824	ENSONIG00000016604	-	97	60.802	Oreochromis_niloticus
ENSCPBG00000025471	-	79	55.774	ENSOMEG00000011226	-	78	55.774	Oryzias_melastigma
ENSCPBG00000025471	-	78	88.030	ENSPPRG00000000748	-	85	88.030	Panthera_pardus
ENSCPBG00000025471	-	79	88.308	ENSPTIG00000021167	-	91	88.308	Panthera_tigris_altaica
ENSCPBG00000025471	-	88	69.933	ENSPKIG00000022185	carm1l	98	69.933	Paramormyrops_kingsleyae
ENSCPBG00000025471	-	67	99.051	ENSPSIG00000017939	-	100	99.051	Pelodiscus_sinensis
ENSCPBG00000025471	-	77	91.111	ENSPCIG00000030606	-	96	91.692	Phascolarctos_cinereus
ENSCPBG00000025471	-	75	67.236	ENSPNYG00000016436	-	98	63.819	Pundamilia_nyererei
ENSCPBG00000025471	-	90	63.710	ENSPNAG00000026491	carm1l	100	63.710	Pygocentrus_nattereri
ENSCPBG00000025471	-	67	92.405	ENSSHAG00000002395	-	100	92.405	Sarcophilus_harrisii
ENSCPBG00000025471	-	88	68.958	ENSSFOG00015018872	carm1l	98	69.469	Scleropages_formosus
ENSCPBG00000025471	-	77	66.389	ENSSDUG00000018596	-	93	62.381	Seriola_dumerili
ENSCPBG00000025471	-	77	66.111	ENSSLDG00000013596	carm1l	93	62.143	Seriola_lalandi_dorsalis
ENSCPBG00000025471	-	89	95.824	ENSSPUG00000001722	-	99	95.824	Sphenodon_punctatus
ENSCPBG00000025471	-	79	58.865	ENSSPAG00000003543	carm1l	89	58.865	Stegastes_partitus
ENSCPBG00000025471	-	91	81.435	ENSSSCG00000039823	-	97	79.837	Sus_scrofa
ENSCPBG00000025471	-	56	46.128	ENSTRUG00000020502	-	91	46.128	Takifugu_rubripes
ENSCPBG00000025471	-	79	87.811	ENSUMAG00000018187	-	90	87.811	Ursus_maritimus
ENSCPBG00000025471	-	79	89.851	ENSVVUG00000006545	-	97	89.851	Vulpes_vulpes