EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025481 (Gene tree)
Gene ID: 101952154
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 91241 bases
Position: chr6:13293294-13384534
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036703	RTC	PF01137.21	1e-60	1	1
ENSCPBP00000036701	RTC	PF01137.21	6.6e-43	1	1
ENSCPBP00000036701	RTC_insert	PF05189.13	4.3e-36	1	1
ENSCPBP00000036703	RTC_insert	PF05189.13	5.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043047	RCL1-202	1581	-	ENSCPBP00000036703	411 (aa)	-	-
ENSCPBT00000043045	RCL1-201	1344	-	ENSCPBP00000036701	349 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000025481's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025481	RCL1	94	89.362	ENSG00000120158	RCL1	100	89.302	Homo_sapiens
ENSCPBG00000025481	RCL1	94	77.576	ENSAPOG00000015666	rcl1	100	76.471	Acanthochromis_polyacanthus
ENSCPBG00000025481	RCL1	94	89.666	ENSAMEG00000002631	RCL1	100	89.544	Ailuropoda_melanoleuca
ENSCPBG00000025481	RCL1	94	76.970	ENSACIG00000021195	rcl1	100	76.738	Amphilophus_citrinellus
ENSCPBG00000025481	RCL1	94	76.061	ENSAOCG00000002223	rcl1	100	75.401	Amphiprion_ocellaris
ENSCPBG00000025481	RCL1	94	76.364	ENSAPEG00000006905	rcl1	100	75.668	Amphiprion_percula
ENSCPBG00000025481	RCL1	94	75.152	ENSATEG00000020026	rcl1	100	74.599	Anabas_testudineus
ENSCPBG00000025481	RCL1	94	89.329	ENSAPLG00000006031	RCL1	100	89.329	Anas_platyrhynchos
ENSCPBG00000025481	RCL1	94	86.930	ENSACAG00000003640	RCL1	100	87.399	Anolis_carolinensis
ENSCPBG00000025481	RCL1	94	89.058	ENSANAG00000037372	RCL1	100	88.740	Aotus_nancymaae
ENSCPBG00000025481	RCL1	94	76.970	ENSACLG00000021724	rcl1	100	76.203	Astatotilapia_calliptera
ENSCPBG00000025481	RCL1	94	78.485	ENSAMXG00000033394	rcl1	99	77.989	Astyanax_mexicanus
ENSCPBG00000025481	RCL1	94	44.643	WBGene00022852	ZK1127.5	99	45.333	Caenorhabditis_elegans
ENSCPBG00000025481	RCL1	94	89.362	ENSCJAG00000011202	RCL1	100	89.276	Callithrix_jacchus
ENSCPBG00000025481	RCL1	94	90.274	ENSCAFG00000002091	RCL1	100	89.544	Canis_familiaris
ENSCPBG00000025481	RCL1	94	90.274	ENSCAFG00020000638	RCL1	79	89.362	Canis_lupus_dingo
ENSCPBG00000025481	RCL1	94	89.362	ENSCHIG00000012407	RCL1	100	89.276	Capra_hircus
ENSCPBG00000025481	RCL1	94	89.908	ENSTSYG00000009592	RCL1	97	89.503	Carlito_syrichta
ENSCPBG00000025481	RCL1	73	73.410	ENSCAPG00000013575	RCL1	100	73.410	Cavia_aperea
ENSCPBG00000025481	RCL1	94	89.058	ENSCPOG00000015354	RCL1	100	89.008	Cavia_porcellus
ENSCPBG00000025481	RCL1	94	89.058	ENSCCAG00000033505	RCL1	100	89.008	Cebus_capucinus
ENSCPBG00000025481	RCL1	94	88.754	ENSCATG00000034721	RCL1	100	88.472	Cercocebus_atys
ENSCPBG00000025481	RCL1	94	87.842	ENSCLAG00000007445	RCL1	100	87.936	Chinchilla_lanigera
ENSCPBG00000025481	RCL1	94	89.362	ENSCSAG00000008811	RCL1	100	89.008	Chlorocebus_sabaeus
ENSCPBG00000025481	RCL1	79	81.522	ENSCHOG00000007216	RCL1	100	75.542	Choloepus_hoffmanni
ENSCPBG00000025481	RCL1	94	56.928	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSCPBG00000025481	RCL1	87	30.110	ENSCSAVG00000007269	-	95	30.110	Ciona_savignyi
ENSCPBG00000025481	RCL1	94	89.362	ENSCANG00000027099	RCL1	100	89.008	Colobus_angolensis_palliatus
ENSCPBG00000025481	RCL1	94	88.754	ENSCGRG00001013748	Rcl1	100	88.472	Cricetulus_griseus_chok1gshd
ENSCPBG00000025481	RCL1	94	89.024	ENSCGRG00000005843	Rcl1	99	89.024	Cricetulus_griseus_crigri
ENSCPBG00000025481	RCL1	94	76.970	ENSCSEG00000000712	rcl1	98	76.738	Cynoglossus_semilaevis
ENSCPBG00000025481	RCL1	94	78.182	ENSCVAG00000011536	rcl1	100	77.005	Cyprinodon_variegatus
ENSCPBG00000025481	RCL1	94	75.152	ENSDARG00000038312	rcl1	100	74.659	Danio_rerio
ENSCPBG00000025481	RCL1	76	89.057	ENSDNOG00000019911	RCL1	100	89.057	Dasypus_novemcinctus
ENSCPBG00000025481	RCL1	94	89.362	ENSDORG00000015645	Rcl1	100	88.472	Dipodomys_ordii
ENSCPBG00000025481	RCL1	94	53.433	FBgn0020909	Rtc1	99	53.684	Drosophila_melanogaster
ENSCPBG00000025481	RCL1	77	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSCPBG00000025481	RCL1	94	54.848	ENSEBUG00000016621	-	98	54.891	Eptatretus_burgeri
ENSCPBG00000025481	RCL1	94	89.666	ENSEASG00005010653	RCL1	100	89.544	Equus_asinus_asinus
ENSCPBG00000025481	RCL1	94	89.666	ENSECAG00000015973	RCL1	100	89.544	Equus_caballus
ENSCPBG00000025481	RCL1	87	81.848	ENSEEUG00000009801	RCL1	100	76.139	Erinaceus_europaeus
ENSCPBG00000025481	RCL1	94	74.242	ENSELUG00000007353	rcl1	100	74.064	Esox_lucius
ENSCPBG00000025481	RCL1	94	89.058	ENSFCAG00000014557	RCL1	100	88.740	Felis_catus
ENSCPBG00000025481	RCL1	95	87.387	ENSFALG00000010553	RCL1	94	83.380	Ficedula_albicollis
ENSCPBG00000025481	RCL1	94	87.768	ENSFDAG00000004209	RCL1	100	87.768	Fukomys_damarensis
ENSCPBG00000025481	RCL1	99	75.942	ENSFHEG00000011228	rcl1	100	77.005	Fundulus_heteroclitus
ENSCPBG00000025481	RCL1	94	76.667	ENSGMOG00000004677	rcl1	99	75.881	Gadus_morhua
ENSCPBG00000025481	RCL1	94	88.754	ENSGALG00000015024	RCL1	99	87.500	Gallus_gallus
ENSCPBG00000025481	RCL1	94	76.364	ENSGAFG00000007257	rcl1	100	75.401	Gambusia_affinis
ENSCPBG00000025481	RCL1	94	76.364	ENSGACG00000017474	rcl1	100	75.134	Gasterosteus_aculeatus
ENSCPBG00000025481	RCL1	94	97.872	ENSGAGG00000003689	RCL1	100	98.123	Gopherus_agassizii
ENSCPBG00000025481	RCL1	94	89.362	ENSGGOG00000015041	RCL1	100	89.276	Gorilla_gorilla
ENSCPBG00000025481	RCL1	94	77.273	ENSHBUG00000001393	rcl1	100	76.471	Haplochromis_burtoni
ENSCPBG00000025481	RCL1	94	87.538	ENSHGLG00000016452	RCL1	100	87.668	Heterocephalus_glaber_female
ENSCPBG00000025481	RCL1	94	73.860	ENSHGLG00000005368	-	100	74.799	Heterocephalus_glaber_female
ENSCPBG00000025481	RCL1	94	74.772	ENSHGLG00100018010	-	100	75.603	Heterocephalus_glaber_male
ENSCPBG00000025481	RCL1	94	87.768	ENSHGLG00100008718	-	95	86.970	Heterocephalus_glaber_male
ENSCPBG00000025481	RCL1	94	75.758	ENSHCOG00000020170	rcl1	100	75.668	Hippocampus_comes
ENSCPBG00000025481	RCL1	94	77.576	ENSIPUG00000018054	RCL1	99	77.717	Ictalurus_punctatus
ENSCPBG00000025481	RCL1	94	89.058	ENSSTOG00000000023	RCL1	100	89.008	Ictidomys_tridecemlineatus
ENSCPBG00000025481	RCL1	91	80.126	ENSJJAG00000015632	-	100	77.480	Jaculus_jaculus
ENSCPBG00000025481	RCL1	58	65.672	ENSJJAG00000000764	-	98	65.672	Jaculus_jaculus
ENSCPBG00000025481	RCL1	94	88.450	ENSJJAG00000022803	-	100	87.936	Jaculus_jaculus
ENSCPBG00000025481	RCL1	94	76.061	ENSKMAG00000011946	rcl1	99	75.749	Kryptolebias_marmoratus
ENSCPBG00000025481	RCL1	97	74.706	ENSLBEG00000003957	rcl1	100	73.262	Labrus_bergylta
ENSCPBG00000025481	RCL1	86	79.000	ENSLACG00000004594	RCL1	98	83.596	Latimeria_chalumnae
ENSCPBG00000025481	RCL1	94	82.979	ENSLOCG00000010148	rcl1	98	82.306	Lepisosteus_oculatus
ENSCPBG00000025481	RCL1	94	86.322	ENSLAFG00000017495	RCL1	100	85.791	Loxodonta_africana
ENSCPBG00000025481	RCL1	94	89.362	ENSMFAG00000037906	RCL1	100	89.008	Macaca_fascicularis
ENSCPBG00000025481	RCL1	94	89.362	ENSMNEG00000012288	RCL1	100	89.008	Macaca_nemestrina
ENSCPBG00000025481	RCL1	94	89.362	ENSMLEG00000043088	RCL1	100	89.008	Mandrillus_leucophaeus
ENSCPBG00000025481	RCL1	59	30.189	ENSMLEG00000042151	RTCA	68	30.189	Mandrillus_leucophaeus
ENSCPBG00000025481	RCL1	94	77.879	ENSMAMG00000008311	rcl1	100	76.738	Mastacembelus_armatus
ENSCPBG00000025481	RCL1	94	76.970	ENSMZEG00005017292	rcl1	100	76.203	Maylandia_zebra
ENSCPBG00000025481	RCL1	62	84.475	ENSMGAG00000002245	RCL1	100	84.475	Meleagris_gallopavo
ENSCPBG00000025481	RCL1	62	88.837	ENSMAUG00000008922	Rcl1	100	88.837	Mesocricetus_auratus
ENSCPBG00000025481	RCL1	94	89.058	ENSMICG00000015562	RCL1	100	88.472	Microcebus_murinus
ENSCPBG00000025481	RCL1	94	89.362	ENSMOCG00000012145	Rcl1	100	89.008	Microtus_ochrogaster
ENSCPBG00000025481	RCL1	94	74.622	ENSMMOG00000021264	rcl1	100	73.600	Mola_mola
ENSCPBG00000025481	RCL1	89	89.389	ENSMODG00000015377	RCL1	94	89.577	Monodelphis_domestica
ENSCPBG00000025481	RCL1	94	76.364	ENSMALG00000018618	rcl1	100	75.401	Monopterus_albus
ENSCPBG00000025481	RCL1	94	89.362	MGP_CAROLIEiJ_G0022853	Rcl1	100	89.008	Mus_caroli
ENSCPBG00000025481	RCL1	94	89.362	ENSMUSG00000024785	Rcl1	100	89.008	Mus_musculus
ENSCPBG00000025481	RCL1	94	89.970	MGP_PahariEiJ_G0014346	Rcl1	100	91.765	Mus_pahari
ENSCPBG00000025481	RCL1	94	89.362	MGP_SPRETEiJ_G0023771	Rcl1	100	91.176	Mus_spretus
ENSCPBG00000025481	RCL1	94	89.362	ENSMPUG00000004998	RCL1	100	89.008	Mustela_putorius_furo
ENSCPBG00000025481	RCL1	94	88.754	ENSMLUG00000009654	RCL1	100	88.740	Myotis_lucifugus
ENSCPBG00000025481	RCL1	94	88.450	ENSNGAG00000015327	Rcl1	100	88.204	Nannospalax_galili
ENSCPBG00000025481	RCL1	95	76.435	ENSNBRG00000019854	rcl1	96	72.626	Neolamprologus_brichardi
ENSCPBG00000025481	RCL1	94	86.018	ENSNLEG00000008891	RCL1	100	86.327	Nomascus_leucogenys
ENSCPBG00000025481	RCL1	87	90.429	ENSMEUG00000007653	RCL1	100	83.914	Notamacropus_eugenii
ENSCPBG00000025481	RCL1	94	89.362	ENSOPRG00000010965	RCL1	100	89.276	Ochotona_princeps
ENSCPBG00000025481	RCL1	94	73.193	ENSODEG00000004151	RCL1	96	73.193	Octodon_degus
ENSCPBG00000025481	RCL1	94	77.273	ENSONIG00000003871	rcl1	100	76.738	Oreochromis_niloticus
ENSCPBG00000025481	RCL1	72	86.166	ENSOANG00000013193	-	100	86.166	Ornithorhynchus_anatinus
ENSCPBG00000025481	RCL1	94	89.362	ENSOCUG00000008161	RCL1	100	89.276	Oryctolagus_cuniculus
ENSCPBG00000025481	RCL1	94	74.848	ENSORLG00000010443	rcl1	100	74.599	Oryzias_latipes
ENSCPBG00000025481	RCL1	94	74.848	ENSORLG00020012211	rcl1	100	74.599	Oryzias_latipes_hni
ENSCPBG00000025481	RCL1	94	74.545	ENSORLG00015001122	rcl1	100	74.332	Oryzias_latipes_hsok
ENSCPBG00000025481	RCL1	94	76.364	ENSOMEG00000022976	rcl1	88	75.668	Oryzias_melastigma
ENSCPBG00000025481	RCL1	94	88.450	ENSOGAG00000007480	RCL1	100	87.936	Otolemur_garnettii
ENSCPBG00000025481	RCL1	94	89.058	ENSOARG00000013463	RCL1	100	89.008	Ovis_aries
ENSCPBG00000025481	RCL1	94	89.362	ENSPPAG00000037958	RCL1	100	89.544	Pan_paniscus
ENSCPBG00000025481	RCL1	93	88.957	ENSPPRG00000022645	RCL1	100	87.936	Panthera_pardus
ENSCPBG00000025481	RCL1	93	89.264	ENSPTIG00000019031	RCL1	100	88.372	Panthera_tigris_altaica
ENSCPBG00000025481	RCL1	94	89.058	ENSPTRG00000020743	RCL1	100	89.276	Pan_troglodytes
ENSCPBG00000025481	RCL1	94	89.362	ENSPANG00000025151	RCL1	100	89.008	Papio_anubis
ENSCPBG00000025481	RCL1	94	79.697	ENSPKIG00000021022	rcl1	100	77.807	Paramormyrops_kingsleyae
ENSCPBG00000025481	RCL1	94	96.951	ENSPSIG00000012302	RCL1	100	96.951	Pelodiscus_sinensis
ENSCPBG00000025481	RCL1	94	75.152	ENSPMGG00000024007	rcl1	100	74.332	Periophthalmus_magnuspinnatus
ENSCPBG00000025481	RCL1	94	89.666	ENSPEMG00000023275	Rcl1	100	89.276	Peromyscus_maniculatus_bairdii
ENSCPBG00000025481	RCL1	87	31.270	ENSPMAG00000009110	rtca	95	30.939	Petromyzon_marinus
ENSCPBG00000025481	RCL1	51	65.363	ENSPMAG00000005419	-	95	65.363	Petromyzon_marinus
ENSCPBG00000025481	RCL1	94	90.214	ENSPCIG00000000188	RCL1	100	90.080	Phascolarctos_cinereus
ENSCPBG00000025481	RCL1	94	76.970	ENSPFOG00000019682	rcl1	99	75.936	Poecilia_formosa
ENSCPBG00000025481	RCL1	94	76.970	ENSPLAG00000022354	rcl1	100	75.936	Poecilia_latipinna
ENSCPBG00000025481	RCL1	94	76.970	ENSPMEG00000008131	rcl1	100	75.936	Poecilia_mexicana
ENSCPBG00000025481	RCL1	94	76.667	ENSPREG00000008032	rcl1	100	75.668	Poecilia_reticulata
ENSCPBG00000025481	RCL1	94	89.058	ENSPPYG00000019244	RCL1	100	89.008	Pongo_abelii
ENSCPBG00000025481	RCL1	93	79.141	ENSPCAG00000001440	RCL1	100	79.088	Procavia_capensis
ENSCPBG00000025481	RCL1	94	90.274	ENSPCOG00000009611	RCL1	100	89.812	Propithecus_coquereli
ENSCPBG00000025481	RCL1	94	89.362	ENSPVAG00000015752	RCL1	100	89.544	Pteropus_vampyrus
ENSCPBG00000025481	RCL1	94	76.970	ENSPNYG00000012910	rcl1	100	76.203	Pundamilia_nyererei
ENSCPBG00000025481	RCL1	94	77.576	ENSPNAG00000028307	rcl1	93	75.862	Pygocentrus_nattereri
ENSCPBG00000025481	RCL1	94	88.450	ENSRNOG00000015491	Rcl1	100	88.204	Rattus_norvegicus
ENSCPBG00000025481	RCL1	94	89.058	ENSRBIG00000035818	RCL1	100	88.740	Rhinopithecus_bieti
ENSCPBG00000025481	RCL1	94	89.362	ENSRROG00000029781	RCL1	100	89.008	Rhinopithecus_roxellana
ENSCPBG00000025481	RCL1	94	36.391	YOL010W	-	99	37.533	Saccharomyces_cerevisiae
ENSCPBG00000025481	RCL1	94	88.754	ENSSBOG00000026369	RCL1	100	88.740	Saimiri_boliviensis_boliviensis
ENSCPBG00000025481	RCL1	94	89.329	ENSSHAG00000014086	RCL1	100	89.091	Sarcophilus_harrisii
ENSCPBG00000025481	RCL1	94	80.000	ENSSFOG00015023020	rcl1	100	78.610	Scleropages_formosus
ENSCPBG00000025481	RCL1	94	76.364	ENSSMAG00000019751	rcl1	87	74.934	Scophthalmus_maximus
ENSCPBG00000025481	RCL1	94	77.273	ENSSDUG00000006349	rcl1	100	76.203	Seriola_dumerili
ENSCPBG00000025481	RCL1	94	77.576	ENSSLDG00000022076	rcl1	100	76.471	Seriola_lalandi_dorsalis
ENSCPBG00000025481	RCL1	94	89.329	ENSSARG00000009260	RCL1	100	88.204	Sorex_araneus
ENSCPBG00000025481	RCL1	94	91.489	ENSSPUG00000016330	RCL1	100	91.957	Sphenodon_punctatus
ENSCPBG00000025481	RCL1	94	77.576	ENSSPAG00000018038	rcl1	100	76.738	Stegastes_partitus
ENSCPBG00000025481	RCL1	94	89.970	ENSSSCG00000005217	RCL1	96	81.062	Sus_scrofa
ENSCPBG00000025481	RCL1	94	87.613	ENSTGUG00000005138	RCL1	100	86.933	Taeniopygia_guttata
ENSCPBG00000025481	RCL1	94	74.545	ENSTRUG00000010493	rcl1	99	73.984	Takifugu_rubripes
ENSCPBG00000025481	RCL1	94	74.545	ENSTNIG00000013214	rcl1	99	73.713	Tetraodon_nigroviridis
ENSCPBG00000025481	RCL1	94	82.371	ENSTBEG00000016339	RCL1	100	83.378	Tupaia_belangeri
ENSCPBG00000025481	RCL1	94	88.754	ENSTTRG00000016525	RCL1	100	88.740	Tursiops_truncatus
ENSCPBG00000025481	RCL1	94	89.666	ENSUAMG00000005598	RCL1	100	90.123	Ursus_americanus
ENSCPBG00000025481	RCL1	94	89.297	ENSUMAG00000017890	RCL1	97	89.297	Ursus_maritimus
ENSCPBG00000025481	RCL1	94	90.520	ENSVPAG00000009188	RCL1	100	90.520	Vicugna_pacos
ENSCPBG00000025481	RCL1	94	90.549	ENSVVUG00000007304	RCL1	89	90.549	Vulpes_vulpes
ENSCPBG00000025481	RCL1	94	75.152	ENSXETG00000000592	rcl1	100	74.866	Xenopus_tropicalis
ENSCPBG00000025481	RCL1	94	76.970	ENSXCOG00000004922	rcl1	100	75.936	Xiphophorus_couchianus
ENSCPBG00000025481	RCL1	52	31.163	ENSXCOG00000008002	rtca	62	31.163	Xiphophorus_couchianus
ENSCPBG00000025481	RCL1	94	76.970	ENSXMAG00000022366	RCL1	100	75.936	Xiphophorus_maculatus