EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025581 (Gene tree)
Gene ID: 101938576
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 153469 bases
Position: chrKK082965.1:973238-1126706
Accession: 23505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000036865	AARP2CN	PF08142.12	7.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043237	BMS1-201	4272	XM_008170526	ENSCPBP00000036865	1314 (aa)	XP_008168748	-

Gene Model

Click here to download ENSCPBG00000025581's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025581	BMS1	99	72.872	ENSG00000165733	BMS1	99	74.502	Homo_sapiens
ENSCPBG00000025581	BMS1	69	73.519	ENSAPOG00000002296	bms1	99	60.290	Acanthochromis_polyacanthus
ENSCPBG00000025581	BMS1	99	72.975	ENSAMEG00000016834	BMS1	99	74.345	Ailuropoda_melanoleuca
ENSCPBG00000025581	BMS1	87	69.663	ENSACIG00000002588	bms1	96	68.850	Amphilophus_citrinellus
ENSCPBG00000025581	BMS1	83	69.243	ENSAOCG00000018088	bms1	99	61.550	Amphiprion_ocellaris
ENSCPBG00000025581	BMS1	81	70.982	ENSAPEG00000014673	bms1	99	61.579	Amphiprion_percula
ENSCPBG00000025581	BMS1	87	68.800	ENSATEG00000023465	bms1	98	66.214	Anabas_testudineus
ENSCPBG00000025581	BMS1	95	80.735	ENSAPLG00000003759	BMS1	99	81.592	Anas_platyrhynchos
ENSCPBG00000025581	BMS1	99	77.557	ENSACAG00000004537	-	99	78.311	Anolis_carolinensis
ENSCPBG00000025581	BMS1	99	71.818	ENSANAG00000023432	BMS1	99	73.724	Aotus_nancymaae
ENSCPBG00000025581	BMS1	86	69.293	ENSACLG00000001294	bms1	98	66.355	Astatotilapia_calliptera
ENSCPBG00000025581	BMS1	81	74.371	ENSAMXG00000011236	bms1	99	61.374	Astyanax_mexicanus
ENSCPBG00000025581	BMS1	99	73.178	ENSBTAG00000012878	BMS1	99	74.040	Bos_taurus
ENSCPBG00000025581	BMS1	77	52.228	WBGene00022021	Y61A9LA.10	96	51.878	Caenorhabditis_elegans
ENSCPBG00000025581	BMS1	99	73.313	ENSCJAG00000021705	BMS1	99	74.369	Callithrix_jacchus
ENSCPBG00000025581	BMS1	99	73.596	ENSCAFG00000007114	BMS1	99	74.251	Canis_familiaris
ENSCPBG00000025581	BMS1	99	73.596	ENSCAFG00020025282	BMS1	99	74.251	Canis_lupus_dingo
ENSCPBG00000025581	BMS1	99	73.268	ENSCHIG00000023251	BMS1	99	74.410	Capra_hircus
ENSCPBG00000025581	BMS1	99	69.579	ENSCAPG00000008652	BMS1	99	69.011	Cavia_aperea
ENSCPBG00000025581	BMS1	99	72.567	ENSCPOG00000000502	BMS1	99	72.488	Cavia_porcellus
ENSCPBG00000025581	BMS1	99	59.878	ENSCCAG00000024969	-	99	60.122	Cebus_capucinus
ENSCPBG00000025581	BMS1	89	54.754	ENSCATG00000008695	-	96	54.754	Cercocebus_atys
ENSCPBG00000025581	BMS1	99	74.176	ENSCATG00000030625	-	99	74.486	Cercocebus_atys
ENSCPBG00000025581	BMS1	99	72.422	ENSCLAG00000002446	BMS1	99	72.685	Chinchilla_lanigera
ENSCPBG00000025581	BMS1	99	74.540	ENSCSAG00000011118	BMS1	99	74.575	Chlorocebus_sabaeus
ENSCPBG00000025581	BMS1	99	73.282	ENSCHOG00000011055	BMS1	99	73.769	Choloepus_hoffmanni
ENSCPBG00000025581	BMS1	77	60.688	ENSCING00000003181	-	98	56.512	Ciona_intestinalis
ENSCPBG00000025581	BMS1	67	56.220	ENSCSAVG00000004113	-	92	56.075	Ciona_savignyi
ENSCPBG00000025581	BMS1	99	74.371	ENSCANG00000011609	BMS1	99	74.277	Colobus_angolensis_palliatus
ENSCPBG00000025581	BMS1	99	72.574	ENSCGRG00001019461	Bms1	99	72.345	Cricetulus_griseus_chok1gshd
ENSCPBG00000025581	BMS1	99	72.308	ENSCGRG00000009016	Bms1	99	72.345	Cricetulus_griseus_crigri
ENSCPBG00000025581	BMS1	80	75.176	ENSCSEG00000002469	bms1	94	67.258	Cynoglossus_semilaevis
ENSCPBG00000025581	BMS1	84	69.887	ENSCVAG00000008371	bms1	96	70.000	Cyprinodon_variegatus
ENSCPBG00000025581	BMS1	86	67.512	ENSDARG00000054154	bms1	99	61.843	Danio_rerio
ENSCPBG00000025581	BMS1	99	74.426	ENSDNOG00000015761	BMS1	99	75.019	Dasypus_novemcinctus
ENSCPBG00000025581	BMS1	99	73.583	ENSDORG00000002982	Bms1	99	73.843	Dipodomys_ordii
ENSCPBG00000025581	BMS1	77	60.837	FBgn0036686	CG7728	98	55.187	Drosophila_melanogaster
ENSCPBG00000025581	BMS1	85	73.214	ENSETEG00000009554	BMS1	72	73.214	Echinops_telfairi
ENSCPBG00000025581	BMS1	99	72.755	ENSEASG00005006894	BMS1	99	74.114	Equus_asinus_asinus
ENSCPBG00000025581	BMS1	99	73.152	ENSECAG00000001358	BMS1	99	74.037	Equus_caballus
ENSCPBG00000025581	BMS1	87	69.793	ENSELUG00000001756	bms1	94	69.649	Esox_lucius
ENSCPBG00000025581	BMS1	99	74.848	ENSFCAG00000011220	BMS1	99	74.810	Felis_catus
ENSCPBG00000025581	BMS1	99	79.279	ENSFALG00000006882	BMS1	100	81.104	Ficedula_albicollis
ENSCPBG00000025581	BMS1	99	72.554	ENSFDAG00000001422	BMS1	99	71.836	Fukomys_damarensis
ENSCPBG00000025581	BMS1	84	70.103	ENSFHEG00000003367	bms1	96	69.565	Fundulus_heteroclitus
ENSCPBG00000025581	BMS1	93	62.920	ENSGMOG00000000718	bms1	96	65.430	Gadus_morhua
ENSCPBG00000025581	BMS1	99	79.667	ENSGALG00000002624	BMS1	100	80.819	Gallus_gallus
ENSCPBG00000025581	BMS1	87	66.193	ENSGACG00000015334	bms1	90	66.351	Gasterosteus_aculeatus
ENSCPBG00000025581	BMS1	99	95.103	ENSGAGG00000003467	BMS1	99	95.103	Gopherus_agassizii
ENSCPBG00000025581	BMS1	86	69.293	ENSHBUG00000022628	bms1	98	66.041	Haplochromis_burtoni
ENSCPBG00000025581	BMS1	99	72.052	ENSHGLG00000000477	BMS1	99	70.980	Heterocephalus_glaber_female
ENSCPBG00000025581	BMS1	99	71.975	ENSHGLG00100002176	BMS1	99	70.904	Heterocephalus_glaber_male
ENSCPBG00000025581	BMS1	87	68.336	ENSHCOG00000017604	bms1	97	67.685	Hippocampus_comes
ENSCPBG00000025581	BMS1	88	67.551	ENSIPUG00000017855	bms1	99	61.003	Ictalurus_punctatus
ENSCPBG00000025581	BMS1	99	72.672	ENSSTOG00000015063	BMS1	99	73.592	Ictidomys_tridecemlineatus
ENSCPBG00000025581	BMS1	99	72.693	ENSJJAG00000017328	Bms1	99	73.261	Jaculus_jaculus
ENSCPBG00000025581	BMS1	55	65.250	ENSKMAG00000021982	bms1	89	67.836	Kryptolebias_marmoratus
ENSCPBG00000025581	BMS1	86	68.269	ENSLBEG00000028208	bms1	98	60.061	Labrus_bergylta
ENSCPBG00000025581	BMS1	99	64.790	ENSLACG00000001600	BMS1	100	65.132	Latimeria_chalumnae
ENSCPBG00000025581	BMS1	82	77.427	ENSLOCG00000012914	bms1	99	64.514	Lepisosteus_oculatus
ENSCPBG00000025581	BMS1	99	72.498	ENSLAFG00000006250	BMS1	99	73.092	Loxodonta_africana
ENSCPBG00000025581	BMS1	80	80.851	ENSMFAG00000037771	BMS1	98	80.935	Macaca_fascicularis
ENSCPBG00000025581	BMS1	90	63.277	ENSMMUG00000007426	-	98	63.109	Macaca_mulatta
ENSCPBG00000025581	BMS1	88	55.584	ENSMLEG00000029084	-	99	55.784	Mandrillus_leucophaeus
ENSCPBG00000025581	BMS1	87	66.667	ENSMAMG00000020855	bms1	98	65.297	Mastacembelus_armatus
ENSCPBG00000025581	BMS1	94	64.877	ENSMZEG00005005663	bms1	98	66.292	Maylandia_zebra
ENSCPBG00000025581	BMS1	95	80.080	ENSMGAG00000001170	BMS1	99	81.036	Meleagris_gallopavo
ENSCPBG00000025581	BMS1	99	72.783	ENSMAUG00000002195	Bms1	99	72.602	Mesocricetus_auratus
ENSCPBG00000025581	BMS1	99	73.491	ENSMICG00000009977	BMS1	99	73.217	Microcebus_murinus
ENSCPBG00000025581	BMS1	99	72.319	ENSMOCG00000002038	Bms1	99	72.490	Microtus_ochrogaster
ENSCPBG00000025581	BMS1	85	68.852	ENSMMOG00000000977	bms1	98	65.872	Mola_mola
ENSCPBG00000025581	BMS1	99	75.760	ENSMODG00000001177	BMS1	99	77.011	Monodelphis_domestica
ENSCPBG00000025581	BMS1	82	75.114	ENSMALG00000009680	bms1	98	61.226	Monopterus_albus
ENSCPBG00000025581	BMS1	71	88.350	MGP_CAROLIEiJ_G0028785	-	83	88.471	Mus_caroli
ENSCPBG00000025581	BMS1	98	72.931	ENSMUSG00000030138	Bms1	99	72.193	Mus_musculus
ENSCPBG00000025581	BMS1	99	73.027	MGP_PahariEiJ_G0022539	Bms1	99	73.071	Mus_pahari
ENSCPBG00000025581	BMS1	98	72.608	MGP_SPRETEiJ_G0029816	Bms1	99	72.205	Mus_spretus
ENSCPBG00000025581	BMS1	99	74.580	ENSMPUG00000017276	BMS1	99	74.543	Mustela_putorius_furo
ENSCPBG00000025581	BMS1	99	73.572	ENSMLUG00000003260	BMS1	99	73.496	Myotis_lucifugus
ENSCPBG00000025581	BMS1	92	70.388	ENSNGAG00000015258	Bms1	99	67.990	Nannospalax_galili
ENSCPBG00000025581	BMS1	99	72.546	ENSNLEG00000015791	BMS1	99	73.068	Nomascus_leucogenys
ENSCPBG00000025581	BMS1	79	86.698	ENSOPRG00000005195	BMS1	66	86.765	Ochotona_princeps
ENSCPBG00000025581	BMS1	99	72.303	ENSODEG00000005554	BMS1	99	72.398	Octodon_degus
ENSCPBG00000025581	BMS1	88	70.000	ENSONIG00000007227	bms1	98	65.138	Oreochromis_niloticus
ENSCPBG00000025581	BMS1	99	75.153	ENSOANG00000000662	-	99	75.495	Ornithorhynchus_anatinus
ENSCPBG00000025581	BMS1	99	73.648	ENSOCUG00000005354	BMS1	99	72.581	Oryctolagus_cuniculus
ENSCPBG00000025581	BMS1	86	68.932	ENSORLG00000014655	bms1	96	68.770	Oryzias_latipes
ENSCPBG00000025581	BMS1	86	68.226	ENSORLG00020016246	bms1	98	65.607	Oryzias_latipes_hni
ENSCPBG00000025581	BMS1	86	68.548	ENSORLG00015014183	bms1	98	66.294	Oryzias_latipes_hsok
ENSCPBG00000025581	BMS1	80	75.227	ENSOMEG00000015042	bms1	98	68.738	Oryzias_melastigma
ENSCPBG00000025581	BMS1	99	72.871	ENSOGAG00000006511	BMS1	99	73.298	Otolemur_garnettii
ENSCPBG00000025581	BMS1	99	73.048	ENSOARG00000003900	BMS1	99	74.184	Ovis_aries
ENSCPBG00000025581	BMS1	99	69.552	ENSPPAG00000027837	BMS1	99	70.926	Pan_paniscus
ENSCPBG00000025581	BMS1	99	74.619	ENSPPRG00000001311	BMS1	99	74.581	Panthera_pardus
ENSCPBG00000025581	BMS1	99	73.227	ENSPTIG00000009652	BMS1	99	73.252	Panthera_tigris_altaica
ENSCPBG00000025581	BMS1	99	73.024	ENSPTRG00000002441	BMS1	99	74.502	Pan_troglodytes
ENSCPBG00000025581	BMS1	99	89.498	ENSPSIG00000006481	BMS1	99	90.930	Pelodiscus_sinensis
ENSCPBG00000025581	BMS1	99	66.871	ENSPEMG00000022467	Bms1	99	66.898	Peromyscus_maniculatus_bairdii
ENSCPBG00000025581	BMS1	95	89.262	ENSPCIG00000001339	BMS1	99	84.722	Phascolarctos_cinereus
ENSCPBG00000025581	BMS1	84	67.629	ENSPFOG00000015180	bms1	97	67.026	Poecilia_formosa
ENSCPBG00000025581	BMS1	86	67.835	ENSPMEG00000023176	bms1	93	67.510	Poecilia_mexicana
ENSCPBG00000025581	BMS1	78	74.939	ENSPREG00000002695	bms1	96	67.383	Poecilia_reticulata
ENSCPBG00000025581	BMS1	61	69.712	ENSPPYG00000002836	-	98	70.812	Pongo_abelii
ENSCPBG00000025581	BMS1	72	87.075	ENSPCAG00000014528	BMS1	66	87.075	Procavia_capensis
ENSCPBG00000025581	BMS1	95	70.415	ENSPCOG00000023834	-	99	71.394	Propithecus_coquereli
ENSCPBG00000025581	BMS1	99	72.073	ENSPVAG00000000725	BMS1	99	71.789	Pteropus_vampyrus
ENSCPBG00000025581	BMS1	86	69.032	ENSPNYG00000018866	bms1	93	67.258	Pundamilia_nyererei
ENSCPBG00000025581	BMS1	82	72.331	ENSRNOG00000006576	Bms1	99	73.001	Rattus_norvegicus
ENSCPBG00000025581	BMS1	99	72.159	ENSRROG00000040101	BMS1	99	72.603	Rhinopithecus_roxellana
ENSCPBG00000025581	BMS1	73	45.211	YPL217C	-	85	45.200	Saccharomyces_cerevisiae
ENSCPBG00000025581	BMS1	99	73.543	ENSSBOG00000035778	BMS1	99	74.162	Saimiri_boliviensis_boliviensis
ENSCPBG00000025581	BMS1	99	74.470	ENSSHAG00000005062	BMS1	99	75.643	Sarcophilus_harrisii
ENSCPBG00000025581	BMS1	89	69.921	ENSSFOG00015022313	bms1	99	62.651	Scleropages_formosus
ENSCPBG00000025581	BMS1	80	75.057	ENSSMAG00000019966	bms1	98	61.778	Scophthalmus_maximus
ENSCPBG00000025581	BMS1	86	68.395	ENSSDUG00000016875	bms1	98	61.039	Seriola_dumerili
ENSCPBG00000025581	BMS1	86	69.044	ENSSLDG00000015199	bms1	98	61.376	Seriola_lalandi_dorsalis
ENSCPBG00000025581	BMS1	70	61.238	ENSSARG00000014407	BMS1	100	63.027	Sorex_araneus
ENSCPBG00000025581	BMS1	99	82.622	ENSSPUG00000014454	BMS1	99	83.397	Sphenodon_punctatus
ENSCPBG00000025581	BMS1	99	74.637	ENSSSCG00000010198	BMS1	99	75.250	Sus_scrofa
ENSCPBG00000025581	BMS1	99	79.773	ENSTGUG00000006302	-	99	80.516	Taeniopygia_guttata
ENSCPBG00000025581	BMS1	89	64.308	ENSTRUG00000008028	bms1	98	65.049	Takifugu_rubripes
ENSCPBG00000025581	BMS1	89	66.452	ENSTNIG00000006216	bms1	89	66.290	Tetraodon_nigroviridis
ENSCPBG00000025581	BMS1	59	80.667	ENSTBEG00000001673	-	63	80.743	Tupaia_belangeri
ENSCPBG00000025581	BMS1	99	72.519	ENSTTRG00000007983	BMS1	99	71.880	Tursiops_truncatus
ENSCPBG00000025581	BMS1	99	72.975	ENSUAMG00000023996	BMS1	99	74.711	Ursus_americanus
ENSCPBG00000025581	BMS1	99	72.824	ENSUMAG00000016523	BMS1	99	74.557	Ursus_maritimus
ENSCPBG00000025581	BMS1	84	83.264	ENSVPAG00000007477	BMS1	92	84.410	Vicugna_pacos
ENSCPBG00000025581	BMS1	99	74.066	ENSVVUG00000021305	BMS1	99	74.251	Vulpes_vulpes
ENSCPBG00000025581	BMS1	98	68.034	ENSXETG00000008158	bms1	99	68.955	Xenopus_tropicalis
ENSCPBG00000025581	BMS1	84	67.850	ENSXCOG00000000506	bms1	91	78.261	Xiphophorus_couchianus
ENSCPBG00000025581	BMS1	85	67.983	ENSXMAG00000014236	bms1	96	69.144	Xiphophorus_maculatus