EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025803 (Gene tree)
Gene ID: 101942307
Gene Symbol: GPATCH4
Alias: DKFZP434F1735|FLJ20249|GPATC4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 8581 bases
Position: chrKK083007.1:3159616-3168196
Accession: 25982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037221	G-patch	PF01585.23	9.1e-11	1	1
ENSCPBP00000037223	G-patch	PF01585.23	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043657	GPATCH4-201	1197	-	ENSCPBP00000037221	305 (aa)	XP_005280752	UPI000388A1F0
ENSCPBT00000043659	GPATCH4-202	1467	-	ENSCPBP00000037223	305 (aa)	XP_005280752	UPI000388A1F0

Gene Model

Click here to download ENSCPBG00000025803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025803	GPATCH4	69	53.333	ENSG00000160818	GPATCH4	95	55.000	Homo_sapiens
ENSCPBG00000025803	GPATCH4	66	59.804	ENSAPOG00000008436	gpatch4	52	59.804	Acanthochromis_polyacanthus
ENSCPBG00000025803	GPATCH4	66	59.903	ENSAOCG00000015494	gpatch4	52	59.903	Amphiprion_ocellaris
ENSCPBG00000025803	GPATCH4	66	59.903	ENSAPEG00000022243	gpatch4	52	59.903	Amphiprion_percula
ENSCPBG00000025803	GPATCH4	70	54.460	ENSANAG00000035354	GPATCH4	54	52.093	Aotus_nancymaae
ENSCPBG00000025803	GPATCH4	66	59.512	ENSACLG00000010456	gpatch4	53	60.000	Astatotilapia_calliptera
ENSCPBG00000025803	GPATCH4	70	52.113	ENSCJAG00000006048	GPATCH4	92	54.622	Callithrix_jacchus
ENSCPBG00000025803	GPATCH4	70	53.302	ENSCCAG00000036114	GPATCH4	92	54.622	Cebus_capucinus
ENSCPBG00000025803	GPATCH4	70	52.582	ENSCATG00000042152	GPATCH4	82	53.226	Cercocebus_atys
ENSCPBG00000025803	GPATCH4	58	51.977	ENSCING00000004717	-	70	48.066	Ciona_intestinalis
ENSCPBG00000025803	GPATCH4	56	51.462	ENSCSAVG00000003297	-	64	51.462	Ciona_savignyi
ENSCPBG00000025803	GPATCH4	70	53.052	ENSCANG00000030031	GPATCH4	82	53.226	Colobus_angolensis_palliatus
ENSCPBG00000025803	GPATCH4	62	51.562	ENSCSEG00000012030	gpatch4	55	51.562	Cynoglossus_semilaevis
ENSCPBG00000025803	GPATCH4	65	61.765	ENSDARG00000091931	gpatch4	82	58.228	Danio_rerio
ENSCPBG00000025803	GPATCH4	67	40.741	FBgn0039829	CG15561	57	40.000	Drosophila_melanogaster
ENSCPBG00000025803	GPATCH4	55	42.941	ENSEBUG00000006498	-	55	42.941	Eptatretus_burgeri
ENSCPBG00000025803	GPATCH4	70	51.174	ENSECAG00000011135	GPATCH4	59	49.296	Equus_caballus
ENSCPBG00000025803	GPATCH4	62	62.755	ENSFHEG00000003097	gpatch4	51	62.755	Fundulus_heteroclitus
ENSCPBG00000025803	GPATCH4	71	62.557	ENSGALG00000048365	GPATCH4	52	68.280	Gallus_gallus
ENSCPBG00000025803	GPATCH4	66	59.113	ENSGAFG00000021732	gpatch4	68	57.619	Gambusia_affinis
ENSCPBG00000025803	GPATCH4	63	59.596	ENSGACG00000013318	gpatch4	60	59.091	Gasterosteus_aculeatus
ENSCPBG00000025803	GPATCH4	96	86.986	ENSGAGG00000020710	GPATCH4	96	85.374	Gopherus_agassizii
ENSCPBG00000025803	GPATCH4	63	54.359	ENSGGOG00000000753	GPATCH4	82	53.226	Gorilla_gorilla
ENSCPBG00000025803	GPATCH4	67	61.463	ENSHCOG00000007016	gpatch4	58	60.976	Hippocampus_comes
ENSCPBG00000025803	GPATCH4	64	63.636	ENSIPUG00000006348	gpatch4	65	57.868	Ictalurus_punctatus
ENSCPBG00000025803	GPATCH4	73	51.802	ENSSTOG00000020510	GPATCH4	86	56.667	Ictidomys_tridecemlineatus
ENSCPBG00000025803	GPATCH4	63	63.317	ENSKMAG00000015765	gpatch4	53	61.809	Kryptolebias_marmoratus
ENSCPBG00000025803	GPATCH4	72	54.185	ENSLBEG00000009364	-	66	53.744	Labrus_bergylta
ENSCPBG00000025803	GPATCH4	68	65.217	ENSLACG00000009700	GPATCH4	57	67.172	Latimeria_chalumnae
ENSCPBG00000025803	GPATCH4	68	53.953	ENSLOCG00000008820	gpatch4	59	54.327	Lepisosteus_oculatus
ENSCPBG00000025803	GPATCH4	67	52.709	ENSMFAG00000030965	GPATCH4	82	52.419	Macaca_fascicularis
ENSCPBG00000025803	GPATCH4	70	52.582	ENSMMUG00000002624	GPATCH4	82	53.226	Macaca_mulatta
ENSCPBG00000025803	GPATCH4	68	52.427	ENSMNEG00000028844	GPATCH4	82	52.419	Macaca_nemestrina
ENSCPBG00000025803	GPATCH4	68	52.427	ENSMLEG00000037909	GPATCH4	82	52.419	Mandrillus_leucophaeus
ENSCPBG00000025803	GPATCH4	66	59.512	ENSMZEG00005017452	gpatch4	73	46.735	Maylandia_zebra
ENSCPBG00000025803	GPATCH4	57	43.931	ENSMICG00000034025	-	96	47.107	Microcebus_murinus
ENSCPBG00000025803	GPATCH4	66	59.709	ENSMMOG00000017095	gpatch4	82	62.921	Mola_mola
ENSCPBG00000025803	GPATCH4	70	56.075	ENSMODG00000014154	-	99	55.607	Monodelphis_domestica
ENSCPBG00000025803	GPATCH4	70	57.477	ENSMODG00000016818	-	66	59.184	Monodelphis_domestica
ENSCPBG00000025803	GPATCH4	64	52.551	MGP_CAROLIEiJ_G0025152	Gpatch4	77	52.041	Mus_caroli
ENSCPBG00000025803	GPATCH4	64	52.041	ENSMUSG00000028069	Gpatch4	77	51.531	Mus_musculus
ENSCPBG00000025803	GPATCH4	64	52.551	MGP_PahariEiJ_G0026595	-	77	52.041	Mus_pahari
ENSCPBG00000025803	GPATCH4	64	52.041	MGP_SPRETEiJ_G0026093	Gpatch4	77	51.531	Mus_spretus
ENSCPBG00000025803	GPATCH4	69	52.358	ENSNLEG00000027678	GPATCH4	53	52.358	Nomascus_leucogenys
ENSCPBG00000025803	GPATCH4	70	50.935	ENSMEUG00000006861	-	74	50.935	Notamacropus_eugenii
ENSCPBG00000025803	GPATCH4	63	61.421	ENSONIG00000002261	gpatch4	50	61.421	Oreochromis_niloticus
ENSCPBG00000025803	GPATCH4	82	55.039	ENSORLG00015019725	gpatch4	85	47.213	Oryzias_latipes_hsok
ENSCPBG00000025803	GPATCH4	87	41.481	ENSOMEG00000000529	gpatch4	54	43.662	Oryzias_melastigma
ENSCPBG00000025803	GPATCH4	67	53.695	ENSPPAG00000028364	-	82	53.226	Pan_paniscus
ENSCPBG00000025803	GPATCH4	64	54.124	ENSPTIG00000006717	GPATCH4	79	53.390	Panthera_tigris_altaica
ENSCPBG00000025803	GPATCH4	67	53.695	ENSPTRG00000001464	GPATCH4	82	53.226	Pan_troglodytes
ENSCPBG00000025803	GPATCH4	68	52.913	ENSPANG00000018543	GPATCH4	82	53.226	Papio_anubis
ENSCPBG00000025803	GPATCH4	73	86.607	ENSPSIG00000011317	GPATCH4	79	86.344	Pelodiscus_sinensis
ENSCPBG00000025803	GPATCH4	66	56.398	ENSPMAG00000009175	gpatch4	67	59.278	Petromyzon_marinus
ENSCPBG00000025803	GPATCH4	71	57.589	ENSPFOG00000011835	gpatch4	58	56.897	Poecilia_formosa
ENSCPBG00000025803	GPATCH4	66	59.903	ENSPLAG00000019504	gpatch4	55	58.411	Poecilia_latipinna
ENSCPBG00000025803	GPATCH4	71	57.589	ENSPMEG00000001375	gpatch4	57	58.222	Poecilia_mexicana
ENSCPBG00000025803	GPATCH4	73	56.466	ENSPREG00000017029	gpatch4	61	56.466	Poecilia_reticulata
ENSCPBG00000025803	GPATCH4	56	45.930	ENSPCOG00000013948	-	89	48.872	Propithecus_coquereli
ENSCPBG00000025803	GPATCH4	55	50.898	ENSPCOG00000023130	-	84	53.383	Propithecus_coquereli
ENSCPBG00000025803	GPATCH4	66	59.512	ENSPNYG00000018461	gpatch4	53	59.512	Pundamilia_nyererei
ENSCPBG00000025803	GPATCH4	70	52.582	ENSRBIG00000005742	GPATCH4	82	53.226	Rhinopithecus_bieti
ENSCPBG00000025803	GPATCH4	70	52.582	ENSRROG00000044157	GPATCH4	82	53.226	Rhinopithecus_roxellana
ENSCPBG00000025803	GPATCH4	64	59.184	ENSSHAG00000015436	-	67	59.184	Sarcophilus_harrisii
ENSCPBG00000025803	GPATCH4	63	61.500	ENSSDUG00000006583	gpatch4	50	61.000	Seriola_dumerili
ENSCPBG00000025803	GPATCH4	63	61.500	ENSSLDG00000012365	gpatch4	50	61.500	Seriola_lalandi_dorsalis
ENSCPBG00000025803	GPATCH4	81	73.577	ENSSPUG00000002674	GPATCH4	75	78.475	Sphenodon_punctatus
ENSCPBG00000025803	GPATCH4	66	59.809	ENSSPAG00000011683	gpatch4	52	59.809	Stegastes_partitus
ENSCPBG00000025803	GPATCH4	73	54.506	ENSTNIG00000005156	gpatch4	68	61.111	Tetraodon_nigroviridis
ENSCPBG00000025803	GPATCH4	64	51.020	ENSTTRG00000001113	GPATCH4	78	38.390	Tursiops_truncatus
ENSCPBG00000025803	GPATCH4	69	46.025	ENSVVUG00000006004	-	84	53.333	Vulpes_vulpes
ENSCPBG00000025803	GPATCH4	73	59.916	ENSXETG00000020397	gpatch4	68	66.341	Xenopus_tropicalis
ENSCPBG00000025803	GPATCH4	74	57.205	ENSXCOG00000003911	gpatch4	59	56.388	Xiphophorus_couchianus
ENSCPBG00000025803	GPATCH4	74	56.652	ENSXMAG00000024520	gpatch4	59	55.844	Xiphophorus_maculatus