EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000025819 (Gene tree)
Gene ID: 101933362
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 2809 bases
Position: chrKK083007.1:3246902-3249710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037244	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043685	-	949	-	ENSCPBP00000037244	205 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000025819's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000025819	-	78	46.875	ENSCPBG00000015839	-	77	46.875
ENSCPBG00000025819	-	78	52.500	ENSCPBG00000009941	RAB14	74	52.500
ENSCPBG00000025819	-	74	37.419	ENSCPBG00000002289	RAB36	50	37.419
ENSCPBG00000025819	-	89	32.973	ENSCPBG00000028244	RERG	89	32.973
ENSCPBG00000025819	-	99	78.049	ENSCPBG00000017056	-	94	78.049
ENSCPBG00000025819	-	79	41.975	ENSCPBG00000028375	RAB12	66	41.975
ENSCPBG00000025819	-	73	35.333	ENSCPBG00000013941	-	84	36.250
ENSCPBG00000025819	-	99	81.281	ENSCPBG00000014614	RAB11A	94	81.281
ENSCPBG00000025819	-	97	35.784	ENSCPBG00000011236	-	94	35.784
ENSCPBG00000025819	-	98	46.000	ENSCPBG00000022446	RAB1B	95	46.000
ENSCPBG00000025819	-	78	39.634	ENSCPBG00000016033	RAB9A	75	39.634
ENSCPBG00000025819	-	57	31.405	ENSCPBG00000024120	ARL4A	59	31.405
ENSCPBG00000025819	-	75	35.294	ENSCPBG00000021406	RAB6B	75	35.294
ENSCPBG00000025819	-	74	44.079	ENSCPBG00000023927	RAB22A	78	44.079
ENSCPBG00000025819	-	83	41.765	ENSCPBG00000016907	RAB15	80	41.765
ENSCPBG00000025819	-	93	47.895	ENSCPBG00000023254	RAB2A	96	45.972
ENSCPBG00000025819	-	80	32.121	ENSCPBG00000018286	RHEB	89	32.121
ENSCPBG00000025819	-	74	46.405	ENSCPBG00000011914	RAB19	71	46.405
ENSCPBG00000025819	-	75	46.753	ENSCPBG00000012631	RAB35	95	40.000
ENSCPBG00000025819	-	99	42.857	ENSCPBG00000022559	RAB5A	90	42.857
ENSCPBG00000025819	-	74	40.127	ENSCPBG00000012042	RAB33A	62	40.127
ENSCPBG00000025819	-	90	43.548	ENSCPBG00000001057	RAB39B	87	43.548
ENSCPBG00000025819	-	99	42.079	ENSCPBG00000012712	RAB5B	90	42.079
ENSCPBG00000025819	-	80	53.659	ENSCPBG00000012691	RAB2B	76	53.659
ENSCPBG00000025819	-	98	63.500	ENSCPBG00000025817	RAB25	92	63.500
ENSCPBG00000025819	-	76	30.380	ENSCPBG00000013681	MRAS	78	32.143
ENSCPBG00000025819	-	80	40.000	ENSCPBG00000001542	RAB9B	84	40.000
ENSCPBG00000025819	-	76	35.256	ENSCPBG00000011715	-	68	35.256
ENSCPBG00000025819	-	68	31.429	ENSCPBG00000010155	ARL8A	70	31.429
ENSCPBG00000025819	-	73	35.526	ENSCPBG00000009289	-	84	35.000
ENSCPBG00000025819	-	74	43.421	ENSCPBG00000006855	RAB30	75	43.421
ENSCPBG00000025819	-	85	36.667	ENSCPBG00000027605	RAB33B	78	36.667
ENSCPBG00000025819	-	78	46.875	ENSCPBG00000027619	-	79	46.875
ENSCPBG00000025819	-	56	31.092	ENSCPBG00000024707	ARL4C	60	31.092
ENSCPBG00000025819	-	98	31.683	ENSCPBG00000014340	RAB41	73	35.948
ENSCPBG00000025819	-	84	39.655	ENSCPBG00000011245	RAB42	84	39.655
ENSCPBG00000025819	-	98	44.000	ENSCPBG00000013243	RAB1A	94	44.000
ENSCPBG00000025819	-	78	35.220	ENSCPBG00000000041	RAB6A	76	35.220
ENSCPBG00000025819	-	75	38.994	ENSCPBG00000014343	RAB7A	76	38.994
ENSCPBG00000025819	-	80	30.303	ENSCPBG00000022721	RRAS2	85	31.429
ENSCPBG00000025819	-	73	37.333	ENSCPBG00000022640	RAB23	67	38.125
ENSCPBG00000025819	-	73	36.000	ENSCPBG00000015094	-	85	36.875
ENSCPBG00000025819	-	74	35.484	ENSCPBG00000016544	NRAS	86	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025819	-	99	80.198	ENSAPOG00000008251	rab11al	96	79.412	Acanthochromis_polyacanthus
ENSCPBG00000025819	-	99	79.703	ENSACIG00000017403	rab11al	94	79.703	Amphilophus_citrinellus
ENSCPBG00000025819	-	99	79.703	ENSAOCG00000015678	rab11al	98	79.703	Amphiprion_ocellaris
ENSCPBG00000025819	-	98	80.597	ENSAPEG00000022135	rab11al	95	80.597	Amphiprion_percula
ENSCPBG00000025819	-	98	80.100	ENSATEG00000006156	rab11al	93	80.100	Anabas_testudineus
ENSCPBG00000025819	-	99	80.198	ENSACLG00000010268	rab11al	96	79.803	Astatotilapia_calliptera
ENSCPBG00000025819	-	99	76.733	ENSAMXG00000024632	rab11al	92	76.733	Astyanax_mexicanus
ENSCPBG00000025819	-	98	81.095	ENSCSEG00000011996	rab11al	93	81.095	Cynoglossus_semilaevis
ENSCPBG00000025819	-	99	80.198	ENSCVAG00000020016	rab11al	94	80.198	Cyprinodon_variegatus
ENSCPBG00000025819	-	99	82.673	ENSDARG00000014340	rab11al	94	82.673	Danio_rerio
ENSCPBG00000025819	-	99	79.703	ENSELUG00000012035	rab11al	94	79.703	Esox_lucius
ENSCPBG00000025819	-	99	89.655	ENSFALG00000002594	-	86	89.655	Ficedula_albicollis
ENSCPBG00000025819	-	93	83.246	ENSFHEG00000000832	rab11al	91	83.246	Fundulus_heteroclitus
ENSCPBG00000025819	-	98	78.109	ENSGMOG00000006450	rab11al	99	78.109	Gadus_morhua
ENSCPBG00000025819	-	99	81.683	ENSGAFG00000021725	rab11al	94	81.683	Gambusia_affinis
ENSCPBG00000025819	-	99	79.703	ENSGACG00000013259	rab11al	94	79.703	Gasterosteus_aculeatus
ENSCPBG00000025819	-	99	99.015	ENSGAGG00000020702	-	94	99.015	Gopherus_agassizii
ENSCPBG00000025819	-	99	80.198	ENSHBUG00000009333	rab11al	94	80.198	Haplochromis_burtoni
ENSCPBG00000025819	-	99	79.208	ENSHCOG00000000232	rab11al	94	79.208	Hippocampus_comes
ENSCPBG00000025819	-	99	80.198	ENSIPUG00000006091	RAB11A	94	80.198	Ictalurus_punctatus
ENSCPBG00000025819	-	98	79.602	ENSKMAG00000015516	rab11al	93	79.602	Kryptolebias_marmoratus
ENSCPBG00000025819	-	99	80.693	ENSLBEG00000016417	rab11al	94	80.693	Labrus_bergylta
ENSCPBG00000025819	-	99	80.198	ENSLACG00000011380	rab11al	93	80.198	Latimeria_chalumnae
ENSCPBG00000025819	-	98	82.587	ENSLOCG00000008865	rab11al	93	82.587	Lepisosteus_oculatus
ENSCPBG00000025819	-	99	80.198	ENSMAMG00000010278	rab11al	94	80.198	Mastacembelus_armatus
ENSCPBG00000025819	-	99	80.198	ENSMZEG00005017514	rab11al	94	80.198	Maylandia_zebra
ENSCPBG00000025819	-	77	94.268	ENSMGAG00000004720	-	93	94.268	Meleagris_gallopavo
ENSCPBG00000025819	-	76	91.667	ENSMMOG00000017117	rab11al	76	91.667	Mola_mola
ENSCPBG00000025819	-	99	79.208	ENSMALG00000004093	rab11al	94	79.208	Monopterus_albus
ENSCPBG00000025819	-	99	80.198	ENSNBRG00000005116	rab11al	95	79.703	Neolamprologus_brichardi
ENSCPBG00000025819	-	99	79.703	ENSONIG00000002281	rab11al	94	79.703	Oreochromis_niloticus
ENSCPBG00000025819	-	99	80.198	ENSORLG00000016126	rab11al	94	80.198	Oryzias_latipes
ENSCPBG00000025819	-	99	80.198	ENSORLG00020013747	rab11al	94	80.198	Oryzias_latipes_hni
ENSCPBG00000025819	-	99	80.198	ENSORLG00015019591	rab11al	94	80.198	Oryzias_latipes_hsok
ENSCPBG00000025819	-	98	80.597	ENSOMEG00000020271	rab11al	93	80.597	Oryzias_melastigma
ENSCPBG00000025819	-	98	79.602	ENSPKIG00000020893	rab11al	93	79.602	Paramormyrops_kingsleyae
ENSCPBG00000025819	-	99	96.059	ENSPSIG00000013143	-	94	96.059	Pelodiscus_sinensis
ENSCPBG00000025819	-	98	80.597	ENSPMGG00000004220	rab11al	80	95.041	Periophthalmus_magnuspinnatus
ENSCPBG00000025819	-	99	81.683	ENSPFOG00000011316	rab11al	94	81.683	Poecilia_formosa
ENSCPBG00000025819	-	99	81.683	ENSPLAG00000007986	rab11al	94	81.683	Poecilia_latipinna
ENSCPBG00000025819	-	99	81.683	ENSPMEG00000000804	rab11al	94	81.683	Poecilia_mexicana
ENSCPBG00000025819	-	99	81.683	ENSPREG00000017324	rab11al	94	81.683	Poecilia_reticulata
ENSCPBG00000025819	-	99	80.198	ENSPNYG00000018244	rab11al	94	80.198	Pundamilia_nyererei
ENSCPBG00000025819	-	99	81.188	ENSPNAG00000029085	rab11al	94	81.188	Pygocentrus_nattereri
ENSCPBG00000025819	-	98	80.100	ENSSFOG00015008618	rab11al	93	80.100	Scleropages_formosus
ENSCPBG00000025819	-	99	79.703	ENSSMAG00000016206	rab11al	94	79.703	Scophthalmus_maximus
ENSCPBG00000025819	-	99	79.703	ENSSDUG00000006278	rab11al	94	79.703	Seriola_dumerili
ENSCPBG00000025819	-	99	79.703	ENSSLDG00000012116	rab11al	94	79.703	Seriola_lalandi_dorsalis
ENSCPBG00000025819	-	99	92.118	ENSSPUG00000002526	-	94	92.118	Sphenodon_punctatus
ENSCPBG00000025819	-	99	79.703	ENSSPAG00000012044	rab11al	94	79.703	Stegastes_partitus
ENSCPBG00000025819	-	99	92.118	ENSTGUG00000003680	-	100	92.118	Taeniopygia_guttata
ENSCPBG00000025819	-	99	79.208	ENSTRUG00000007556	rab11al	88	91.111	Takifugu_rubripes
ENSCPBG00000025819	-	99	81.188	ENSXCOG00000004226	rab11al	94	81.188	Xiphophorus_couchianus
ENSCPBG00000025819	-	99	81.188	ENSXMAG00000027071	rab11al	94	81.188	Xiphophorus_maculatus