EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025824 (Gene tree)
Gene ID: 101944507
Gene Symbol: GATB
Alias: PET112|PET112L
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 92521 bases
Position: chr6:25372992-25465512
Accession: 8849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037255	GatB_Yqey	PF02637.18	7.4e-42	1	1
ENSCPBP00000037253	GatB_Yqey	PF02637.18	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043700	GATB-202	2598	-	ENSCPBP00000037255	551 (aa)	XP_005307416	UPI000388BFA8
ENSCPBT00000043694	GATB-201	2192	-	ENSCPBP00000037253	513 (aa)	-	UPI00046C260D

Gene Model

Click here to download ENSCPBG00000025824's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00970	Aminoacyl-tRNA biosynthesis	KEGG
cpic01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025824	GATB	99	70.179	ENSG00000059691	GATB	99	70.179	Homo_sapiens
ENSCPBG00000025824	GATB	89	70.850	ENSAPOG00000022676	gatb	90	70.850	Acanthochromis_polyacanthus
ENSCPBG00000025824	GATB	99	69.912	ENSAMEG00000018434	GATB	99	69.912	Ailuropoda_melanoleuca
ENSCPBG00000025824	GATB	79	68.421	ENSACIG00000015827	gatb	100	68.421	Amphilophus_citrinellus
ENSCPBG00000025824	GATB	89	70.445	ENSAOCG00000009635	gatb	95	70.445	Amphiprion_ocellaris
ENSCPBG00000025824	GATB	89	66.397	ENSAPEG00000023666	gatb	93	66.397	Amphiprion_percula
ENSCPBG00000025824	GATB	89	69.433	ENSATEG00000011821	gatb	96	65.784	Anabas_testudineus
ENSCPBG00000025824	GATB	90	86.263	ENSAPLG00000003933	GATB	100	86.263	Anas_platyrhynchos
ENSCPBG00000025824	GATB	99	76.534	ENSACAG00000002772	GATB	100	76.534	Anolis_carolinensis
ENSCPBG00000025824	GATB	99	69.286	ENSANAG00000020953	GATB	99	69.286	Aotus_nancymaae
ENSCPBG00000025824	GATB	82	68.271	ENSACLG00000026091	gatb	91	69.265	Astatotilapia_calliptera
ENSCPBG00000025824	GATB	89	65.726	ENSAMXG00000021662	gatb	89	65.726	Astyanax_mexicanus
ENSCPBG00000025824	GATB	99	68.515	ENSBTAG00000013914	GATB	99	68.271	Bos_taurus
ENSCPBG00000025824	GATB	99	68.929	ENSCJAG00000002147	GATB	99	68.929	Callithrix_jacchus
ENSCPBG00000025824	GATB	99	70.107	ENSCAFG00000008088	GATB	99	70.107	Canis_familiaris
ENSCPBG00000025824	GATB	99	70.841	ENSCAFG00020026686	GATB	98	73.418	Canis_lupus_dingo
ENSCPBG00000025824	GATB	91	74.950	ENSCHIG00000020111	GATB	90	74.950	Capra_hircus
ENSCPBG00000025824	GATB	99	71.964	ENSTSYG00000009976	GATB	99	71.964	Carlito_syrichta
ENSCPBG00000025824	GATB	86	66.596	ENSCAPG00000010977	GATB	89	66.596	Cavia_aperea
ENSCPBG00000025824	GATB	99	67.684	ENSCPOG00000005023	GATB	99	67.684	Cavia_porcellus
ENSCPBG00000025824	GATB	91	70.526	ENSCCAG00000021445	GATB	95	70.737	Cebus_capucinus
ENSCPBG00000025824	GATB	99	69.464	ENSCATG00000034281	GATB	99	69.464	Cercocebus_atys
ENSCPBG00000025824	GATB	90	74.194	ENSCLAG00000005772	GATB	88	77.240	Chinchilla_lanigera
ENSCPBG00000025824	GATB	99	69.286	ENSCSAG00000003318	GATB	99	69.286	Chlorocebus_sabaeus
ENSCPBG00000025824	GATB	99	70.483	ENSCHOG00000008476	GATB	99	70.410	Choloepus_hoffmanni
ENSCPBG00000025824	GATB	99	69.286	ENSCANG00000029227	GATB	99	69.286	Colobus_angolensis_palliatus
ENSCPBG00000025824	GATB	99	69.052	ENSCGRG00001024051	GATB	99	70.613	Cricetulus_griseus_chok1gshd
ENSCPBG00000025824	GATB	99	69.052	ENSCGRG00000012974	GATB	99	70.613	Cricetulus_griseus_crigri
ENSCPBG00000025824	GATB	89	68.219	ENSCSEG00000004009	gatb	100	64.760	Cynoglossus_semilaevis
ENSCPBG00000025824	GATB	89	70.040	ENSCVAG00000017180	gatb	98	70.040	Cyprinodon_variegatus
ENSCPBG00000025824	GATB	89	69.371	ENSDARG00000037309	gatb	89	69.371	Danio_rerio
ENSCPBG00000025824	GATB	97	72.182	ENSDNOG00000012683	GATB	99	72.000	Dasypus_novemcinctus
ENSCPBG00000025824	GATB	90	74.447	ENSDORG00000010241	Gatb	89	74.447	Dipodomys_ordii
ENSCPBG00000025824	GATB	89	45.951	FBgn0039153	GatB	95	45.951	Drosophila_melanogaster
ENSCPBG00000025824	GATB	99	50.893	ENSETEG00000002356	GATB	99	50.893	Echinops_telfairi
ENSCPBG00000025824	GATB	99	71.786	ENSEASG00005015868	GATB	99	71.786	Equus_asinus_asinus
ENSCPBG00000025824	GATB	99	70.179	ENSECAG00000003539	GATB	99	70.179	Equus_caballus
ENSCPBG00000025824	GATB	81	66.944	ENSEEUG00000002311	GATB	75	69.461	Erinaceus_europaeus
ENSCPBG00000025824	GATB	93	66.992	ENSELUG00000013584	gatb	99	66.992	Esox_lucius
ENSCPBG00000025824	GATB	99	71.048	ENSFCAG00000003207	GATB	99	71.048	Felis_catus
ENSCPBG00000025824	GATB	81	83.445	ENSFALG00000002209	GATB	99	83.445	Ficedula_albicollis
ENSCPBG00000025824	GATB	91	74.148	ENSFDAG00000006426	GATB	88	76.998	Fukomys_damarensis
ENSCPBG00000025824	GATB	91	68.577	ENSFHEG00000008643	GATB	93	68.577	Fundulus_heteroclitus
ENSCPBG00000025824	GATB	89	68.699	ENSGMOG00000001575	gatb	100	68.699	Gadus_morhua
ENSCPBG00000025824	GATB	96	81.767	ENSGALG00000010097	GATB	98	81.767	Gallus_gallus
ENSCPBG00000025824	GATB	89	69.231	ENSGAFG00000014422	gatb	93	66.532	Gambusia_affinis
ENSCPBG00000025824	GATB	89	67.959	ENSGACG00000017143	gatb	99	67.959	Gasterosteus_aculeatus
ENSCPBG00000025824	GATB	100	96.007	ENSGAGG00000007826	GATB	100	96.007	Gopherus_agassizii
ENSCPBG00000025824	GATB	99	70.179	ENSGGOG00000011099	GATB	99	70.179	Gorilla_gorilla
ENSCPBG00000025824	GATB	88	70.928	ENSHBUG00000009656	gatb	88	70.928	Haplochromis_burtoni
ENSCPBG00000025824	GATB	99	68.223	ENSHGLG00000001316	GATB	99	69.831	Heterocephalus_glaber_female
ENSCPBG00000025824	GATB	99	68.402	ENSHGLG00100004289	GATB	99	70.042	Heterocephalus_glaber_male
ENSCPBG00000025824	GATB	89	66.869	ENSHCOG00000006270	gatb	90	66.869	Hippocampus_comes
ENSCPBG00000025824	GATB	89	69.636	ENSIPUG00000013560	gatb	90	69.636	Ictalurus_punctatus
ENSCPBG00000025824	GATB	96	71.429	ENSSTOG00000005689	GATB	94	71.429	Ictidomys_tridecemlineatus
ENSCPBG00000025824	GATB	99	68.214	ENSJJAG00000016979	Gatb	99	70.886	Jaculus_jaculus
ENSCPBG00000025824	GATB	89	69.231	ENSKMAG00000004727	gatb	90	69.231	Kryptolebias_marmoratus
ENSCPBG00000025824	GATB	96	66.477	ENSLBEG00000019511	gatb	93	66.477	Labrus_bergylta
ENSCPBG00000025824	GATB	89	70.528	ENSLACG00000004352	GATB	96	70.732	Latimeria_chalumnae
ENSCPBG00000025824	GATB	89	64.113	ENSLOCG00000008564	gatb	89	64.113	Lepisosteus_oculatus
ENSCPBG00000025824	GATB	91	76.152	ENSLAFG00000022607	GATB	90	76.152	Loxodonta_africana
ENSCPBG00000025824	GATB	99	69.464	ENSMMUG00000011048	GATB	99	69.464	Macaca_mulatta
ENSCPBG00000025824	GATB	99	69.107	ENSMNEG00000040147	GATB	99	69.107	Macaca_nemestrina
ENSCPBG00000025824	GATB	99	69.643	ENSMLEG00000042135	GATB	99	69.643	Mandrillus_leucophaeus
ENSCPBG00000025824	GATB	89	70.243	ENSMAMG00000013256	gatb	90	70.243	Mastacembelus_armatus
ENSCPBG00000025824	GATB	89	70.648	ENSMZEG00005008495	gatb	90	70.648	Maylandia_zebra
ENSCPBG00000025824	GATB	90	85.714	ENSMGAG00000004276	GATB	98	85.542	Meleagris_gallopavo
ENSCPBG00000025824	GATB	99	68.873	ENSMAUG00000019099	Gatb	99	70.825	Mesocricetus_auratus
ENSCPBG00000025824	GATB	99	70.641	ENSMICG00000004311	GATB	99	70.641	Microcebus_murinus
ENSCPBG00000025824	GATB	99	68.336	ENSMOCG00000017566	Gatb	99	70.190	Microtus_ochrogaster
ENSCPBG00000025824	GATB	93	58.108	ENSMMOG00000005376	gatb	90	58.108	Mola_mola
ENSCPBG00000025824	GATB	99	72.694	ENSMODG00000001031	GATB	99	72.694	Monodelphis_domestica
ENSCPBG00000025824	GATB	91	69.034	ENSMALG00000003418	gatb	93	69.034	Monopterus_albus
ENSCPBG00000025824	GATB	91	73.547	MGP_CAROLIEiJ_G0025120	Gatb	88	76.386	Mus_caroli
ENSCPBG00000025824	GATB	97	69.517	ENSMUSG00000028085	Gatb	94	71.681	Mus_musculus
ENSCPBG00000025824	GATB	99	67.794	MGP_PahariEiJ_G0026563	Gatb	99	69.118	Mus_pahari
ENSCPBG00000025824	GATB	97	69.517	MGP_SPRETEiJ_G0026062	Gatb	96	70.205	Mus_spretus
ENSCPBG00000025824	GATB	99	70.107	ENSMPUG00000007394	GATB	99	70.107	Mustela_putorius_furo
ENSCPBG00000025824	GATB	99	70.483	ENSMLUG00000008194	GATB	99	70.304	Myotis_lucifugus
ENSCPBG00000025824	GATB	91	75.952	ENSNGAG00000002152	Gatb	88	78.072	Nannospalax_galili
ENSCPBG00000025824	GATB	79	68.337	ENSNBRG00000005947	gatb	100	68.337	Neolamprologus_brichardi
ENSCPBG00000025824	GATB	99	70.000	ENSNLEG00000005836	GATB	99	70.000	Nomascus_leucogenys
ENSCPBG00000025824	GATB	89	77.890	ENSMEUG00000001479	GATB	99	77.890	Notamacropus_eugenii
ENSCPBG00000025824	GATB	96	70.315	ENSOPRG00000011496	GATB	97	70.315	Ochotona_princeps
ENSCPBG00000025824	GATB	99	67.626	ENSODEG00000005429	GATB	99	69.767	Octodon_degus
ENSCPBG00000025824	GATB	89	70.648	ENSONIG00000010059	gatb	90	70.648	Oreochromis_niloticus
ENSCPBG00000025824	GATB	79	77.471	ENSOANG00000005282	GATB	99	77.471	Ornithorhynchus_anatinus
ENSCPBG00000025824	GATB	91	74.349	ENSOCUG00000016875	GATB	90	74.349	Oryctolagus_cuniculus
ENSCPBG00000025824	GATB	89	67.959	ENSORLG00000007740	gatb	99	67.959	Oryzias_latipes
ENSCPBG00000025824	GATB	91	68.862	ENSORLG00020016385	gatb	91	68.862	Oryzias_latipes_hni
ENSCPBG00000025824	GATB	89	69.734	ENSOMEG00000003089	gatb	89	69.734	Oryzias_melastigma
ENSCPBG00000025824	GATB	97	71.111	ENSOGAG00000014181	GATB	96	71.111	Otolemur_garnettii
ENSCPBG00000025824	GATB	99	68.683	ENSOARG00000004355	GATB	90	74.104	Ovis_aries
ENSCPBG00000025824	GATB	99	70.357	ENSPPAG00000041690	GATB	99	70.357	Pan_paniscus
ENSCPBG00000025824	GATB	99	71.556	ENSPPRG00000004993	GATB	99	71.556	Panthera_pardus
ENSCPBG00000025824	GATB	99	71.556	ENSPTIG00000021433	GATB	99	71.556	Panthera_tigris_altaica
ENSCPBG00000025824	GATB	99	66.964	ENSPTRG00000016513	GATB	99	66.964	Pan_troglodytes
ENSCPBG00000025824	GATB	99	67.321	ENSPANG00000024036	GATB	99	67.321	Papio_anubis
ENSCPBG00000025824	GATB	93	68.350	ENSPKIG00000017076	gatb	99	68.350	Paramormyrops_kingsleyae
ENSCPBG00000025824	GATB	99	90.909	ENSPSIG00000017832	GATB	100	90.909	Pelodiscus_sinensis
ENSCPBG00000025824	GATB	89	60.729	ENSPMGG00000016497	gatb	88	60.729	Periophthalmus_magnuspinnatus
ENSCPBG00000025824	GATB	91	73.547	ENSPEMG00000011096	Gatb	88	76.271	Peromyscus_maniculatus_bairdii
ENSCPBG00000025824	GATB	99	73.188	ENSPCIG00000015213	GATB	99	73.188	Phascolarctos_cinereus
ENSCPBG00000025824	GATB	89	69.215	ENSPFOG00000009933	gatb	91	69.215	Poecilia_formosa
ENSCPBG00000025824	GATB	89	69.838	ENSPLAG00000015569	gatb	93	67.611	Poecilia_latipinna
ENSCPBG00000025824	GATB	89	69.028	ENSPMEG00000006100	gatb	93	67.004	Poecilia_mexicana
ENSCPBG00000025824	GATB	89	68.826	ENSPREG00000000128	gatb	93	66.465	Poecilia_reticulata
ENSCPBG00000025824	GATB	99	70.179	ENSPPYG00000015121	GATB	99	70.179	Pongo_abelii
ENSCPBG00000025824	GATB	95	58.935	ENSPCAG00000005950	GATB	93	58.935	Procavia_capensis
ENSCPBG00000025824	GATB	94	74.662	ENSPCOG00000021777	GATB	93	74.662	Propithecus_coquereli
ENSCPBG00000025824	GATB	91	76.553	ENSPVAG00000006891	GATB	89	76.553	Pteropus_vampyrus
ENSCPBG00000025824	GATB	89	70.648	ENSPNYG00000013884	gatb	90	70.648	Pundamilia_nyererei
ENSCPBG00000025824	GATB	89	70.385	ENSPNAG00000020150	gatb	89	70.385	Pygocentrus_nattereri
ENSCPBG00000025824	GATB	97	69.460	ENSRNOG00000037655	Gatb	96	69.460	Rattus_norvegicus
ENSCPBG00000025824	GATB	99	69.643	ENSRBIG00000006453	GATB	99	69.643	Rhinopithecus_bieti
ENSCPBG00000025824	GATB	99	69.643	ENSRROG00000041575	GATB	99	69.643	Rhinopithecus_roxellana
ENSCPBG00000025824	GATB	86	30.680	YBL080C	-	91	30.502	Saccharomyces_cerevisiae
ENSCPBG00000025824	GATB	99	68.750	ENSSBOG00000022495	GATB	99	68.750	Saimiri_boliviensis_boliviensis
ENSCPBG00000025824	GATB	99	73.418	ENSSHAG00000011763	GATB	99	73.418	Sarcophilus_harrisii
ENSCPBG00000025824	GATB	91	70.099	ENSSFOG00015015565	gatb	91	70.099	Scleropages_formosus
ENSCPBG00000025824	GATB	99	64.899	ENSSMAG00000003609	gatb	74	64.899	Scophthalmus_maximus
ENSCPBG00000025824	GATB	98	65.082	ENSSDUG00000019847	gatb	96	65.082	Seriola_dumerili
ENSCPBG00000025824	GATB	89	70.122	ENSSLDG00000010253	gatb	95	70.122	Seriola_lalandi_dorsalis
ENSCPBG00000025824	GATB	75	62.757	ENSSARG00000003212	GATB	76	62.757	Sorex_araneus
ENSCPBG00000025824	GATB	90	85.887	ENSSPUG00000014453	GATB	96	85.887	Sphenodon_punctatus
ENSCPBG00000025824	GATB	89	70.445	ENSSPAG00000014465	gatb	98	70.445	Stegastes_partitus
ENSCPBG00000025824	GATB	99	70.619	ENSSSCG00000009015	GATB	99	74.541	Sus_scrofa
ENSCPBG00000025824	GATB	90	86.263	ENSTGUG00000004986	GATB	100	86.263	Taeniopygia_guttata
ENSCPBG00000025824	GATB	89	62.698	ENSTRUG00000015238	gatb	91	62.500	Takifugu_rubripes
ENSCPBG00000025824	GATB	74	65.610	ENSTNIG00000003378	gatb	99	65.610	Tetraodon_nigroviridis
ENSCPBG00000025824	GATB	80	56.098	ENSTBEG00000009804	GATB	87	55.841	Tupaia_belangeri
ENSCPBG00000025824	GATB	91	74.349	ENSTTRG00000010679	GATB	90	74.349	Tursiops_truncatus
ENSCPBG00000025824	GATB	99	70.641	ENSUAMG00000021441	GATB	99	70.641	Ursus_americanus
ENSCPBG00000025824	GATB	99	70.285	ENSUMAG00000016157	GATB	99	70.285	Ursus_maritimus
ENSCPBG00000025824	GATB	70	87.179	ENSVPAG00000010844	GATB	69	87.179	Vicugna_pacos
ENSCPBG00000025824	GATB	99	70.641	ENSVVUG00000025083	GATB	99	70.641	Vulpes_vulpes
ENSCPBG00000025824	GATB	88	75.359	ENSXETG00000034167	GATB	98	75.202	Xenopus_tropicalis
ENSCPBG00000025824	GATB	89	69.028	ENSXMAG00000008071	gatb	89	82.667	Xiphophorus_maculatus