EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000025885 (Gene tree)
Gene ID: 101940554
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 53805 bases
Position: chrKK082988.1:3094762-3148566
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037396	Rif1_N	PF12231.8	1.3e-71	1	1
ENSCPBP00000037394	Rif1_N	PF12231.8	1.5e-71	1	1
ENSCPBP00000037385	Rif1_N	PF12231.8	2.7e-71	1	1
ENSCPBP00000037412	Rif1_N	PF12231.8	3.5e-67	1	1
ENSCPBP00000037405	Rif1_N	PF12231.8	4.6e-66	1	1
ENSCPBP00000037402	Rif1_N	PF12231.8	5.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043847	RIF1-201	6528	-	ENSCPBP00000037385	2175 (aa)	-	-
ENSCPBT00000043856	RIF1-202	6618	-	ENSCPBP00000037394	2205 (aa)	-	-
ENSCPBT00000043874	RIF1-206	6288	-	ENSCPBP00000037412	2095 (aa)	-	-
ENSCPBT00000043864	RIF1-204	6465	-	ENSCPBP00000037402	2154 (aa)	-	-
ENSCPBT00000043858	RIF1-203	6588	-	ENSCPBP00000037396	2195 (aa)	-	-
ENSCPBT00000043867	RIF1-205	6405	-	ENSCPBP00000037405	2134 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000025885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025885	RIF1	95	72.700	ENSG00000080345	RIF1	94	72.579	Homo_sapiens
ENSCPBG00000025885	RIF1	70	50.887	ENSAPOG00000011073	rif1	65	50.966	Acanthochromis_polyacanthus
ENSCPBG00000025885	RIF1	99	69.444	ENSAMEG00000008461	RIF1	95	68.889	Ailuropoda_melanoleuca
ENSCPBG00000025885	RIF1	68	50.448	ENSACIG00000017765	rif1	72	49.838	Amphilophus_citrinellus
ENSCPBG00000025885	RIF1	75	50.879	ENSAOCG00000017231	rif1	68	51.843	Amphiprion_ocellaris
ENSCPBG00000025885	RIF1	70	55.654	ENSAPEG00000013228	rif1	66	55.654	Amphiprion_percula
ENSCPBG00000025885	RIF1	88	45.501	ENSATEG00000022887	rif1	68	52.491	Anabas_testudineus
ENSCPBG00000025885	RIF1	97	79.288	ENSAPLG00000007092	RIF1	96	80.437	Anas_platyrhynchos
ENSCPBG00000025885	RIF1	99	68.135	ENSACAG00000003714	RIF1	96	68.144	Anolis_carolinensis
ENSCPBG00000025885	RIF1	99	73.294	ENSANAG00000024840	RIF1	90	72.189	Aotus_nancymaae
ENSCPBG00000025885	RIF1	77	52.367	ENSAMXG00000010910	rif1	68	51.775	Astyanax_mexicanus
ENSCPBG00000025885	RIF1	85	70.048	ENSBTAG00000021020	RIF1	85	71.236	Bos_taurus
ENSCPBG00000025885	RIF1	95	73.529	ENSCJAG00000003138	RIF1	89	72.353	Callithrix_jacchus
ENSCPBG00000025885	RIF1	97	72.485	ENSCAFG00000005670	RIF1	87	71.302	Canis_familiaris
ENSCPBG00000025885	RIF1	95	72.485	ENSCAFG00020016401	RIF1	87	71.302	Canis_lupus_dingo
ENSCPBG00000025885	RIF1	93	68.098	ENSCHIG00000020327	RIF1	86	68.432	Capra_hircus
ENSCPBG00000025885	RIF1	94	69.259	ENSTSYG00000008861	RIF1	91	63.750	Carlito_syrichta
ENSCPBG00000025885	RIF1	83	58.473	ENSCAPG00000008957	RIF1	92	57.995	Cavia_aperea
ENSCPBG00000025885	RIF1	97	65.460	ENSCPOG00000037898	RIF1	92	65.879	Cavia_porcellus
ENSCPBG00000025885	RIF1	96	73.964	ENSCCAG00000024760	RIF1	90	72.781	Cebus_capucinus
ENSCPBG00000025885	RIF1	96	73.077	ENSCATG00000033353	RIF1	90	71.893	Cercocebus_atys
ENSCPBG00000025885	RIF1	90	68.136	ENSCLAG00000001517	RIF1	86	69.374	Chinchilla_lanigera
ENSCPBG00000025885	RIF1	96	73.373	ENSCSAG00000016089	RIF1	90	72.189	Chlorocebus_sabaeus
ENSCPBG00000025885	RIF1	91	72.700	ENSCHOG00000007187	RIF1	84	71.513	Choloepus_hoffmanni
ENSCPBG00000025885	RIF1	90	80.263	ENSCANG00000028962	RIF1	88	78.509	Colobus_angolensis_palliatus
ENSCPBG00000025885	RIF1	96	66.667	ENSCGRG00001024589	Rif1	90	66.384	Cricetulus_griseus_chok1gshd
ENSCPBG00000025885	RIF1	93	68.216	ENSCGRG00000010713	Rif1	89	66.384	Cricetulus_griseus_crigri
ENSCPBG00000025885	RIF1	69	52.649	ENSCSEG00000003945	rif1	67	52.649	Cynoglossus_semilaevis
ENSCPBG00000025885	RIF1	70	48.664	ENSCVAG00000022479	rif1	67	48.632	Cyprinodon_variegatus
ENSCPBG00000025885	RIF1	71	52.404	ENSDARG00000062650	rif1	66	52.670	Danio_rerio
ENSCPBG00000025885	RIF1	91	74.074	ENSDNOG00000011194	RIF1	83	72.840	Dasypus_novemcinctus
ENSCPBG00000025885	RIF1	79	65.774	ENSETEG00000012421	RIF1	78	57.936	Echinops_telfairi
ENSCPBG00000025885	RIF1	99	71.302	ENSEASG00005023434	RIF1	84	81.250	Equus_asinus_asinus
ENSCPBG00000025885	RIF1	93	71.598	ENSECAG00000012679	RIF1	86	70.501	Equus_caballus
ENSCPBG00000025885	RIF1	71	51.282	ENSELUG00000006826	rif1	58	51.031	Esox_lucius
ENSCPBG00000025885	RIF1	96	72.700	ENSFCAG00000029742	RIF1	88	72.107	Felis_catus
ENSCPBG00000025885	RIF1	92	75.313	ENSFALG00000013874	RIF1	92	75.313	Ficedula_albicollis
ENSCPBG00000025885	RIF1	96	69.688	ENSFDAG00000006538	RIF1	90	68.839	Fukomys_damarensis
ENSCPBG00000025885	RIF1	85	44.626	ENSFHEG00000013721	rif1	78	44.832	Fundulus_heteroclitus
ENSCPBG00000025885	RIF1	61	48.878	ENSGMOG00000003517	rif1	87	48.538	Gadus_morhua
ENSCPBG00000025885	RIF1	93	78.034	ENSGALG00000012484	RIF1	96	79.238	Gallus_gallus
ENSCPBG00000025885	RIF1	70	51.922	ENSGAFG00000017196	rif1	70	51.535	Gambusia_affinis
ENSCPBG00000025885	RIF1	65	56.735	ENSGACG00000008579	rif1	66	55.159	Gasterosteus_aculeatus
ENSCPBG00000025885	RIF1	100	94.892	ENSGAGG00000012595	RIF1	100	94.892	Gopherus_agassizii
ENSCPBG00000025885	RIF1	85	72.404	ENSGGOG00000040178	RIF1	83	71.302	Gorilla_gorilla
ENSCPBG00000025885	RIF1	64	52.386	ENSHBUG00000007125	rif1	93	48.000	Haplochromis_burtoni
ENSCPBG00000025885	RIF1	92	59.567	ENSHGLG00100009807	RIF1	88	67.559	Heterocephalus_glaber_male
ENSCPBG00000025885	RIF1	70	50.080	ENSHCOG00000015943	rif1	60	50.239	Hippocampus_comes
ENSCPBG00000025885	RIF1	68	52.965	ENSIPUG00000021703	rif1	68	54.244	Ictalurus_punctatus
ENSCPBG00000025885	RIF1	99	67.612	ENSSTOG00000020712	RIF1	89	68.873	Ictidomys_tridecemlineatus
ENSCPBG00000025885	RIF1	91	70.783	ENSJJAG00000023000	Rif1	86	69.578	Jaculus_jaculus
ENSCPBG00000025885	RIF1	84	46.532	ENSKMAG00000002852	rif1	67	50.723	Kryptolebias_marmoratus
ENSCPBG00000025885	RIF1	69	52.271	ENSLBEG00000023196	rif1	59	52.271	Labrus_bergylta
ENSCPBG00000025885	RIF1	97	62.183	ENSLACG00000005425	RIF1	94	61.675	Latimeria_chalumnae
ENSCPBG00000025885	RIF1	89	52.329	ENSLOCG00000002657	rif1	96	55.961	Lepisosteus_oculatus
ENSCPBG00000025885	RIF1	93	74.474	ENSLAFG00000009796	RIF1	87	74.474	Loxodonta_africana
ENSCPBG00000025885	RIF1	96	73.373	ENSMFAG00000032233	RIF1	90	72.189	Macaca_fascicularis
ENSCPBG00000025885	RIF1	96	73.373	ENSMMUG00000008611	RIF1	90	72.189	Macaca_mulatta
ENSCPBG00000025885	RIF1	96	73.373	ENSMNEG00000031616	RIF1	90	72.189	Macaca_nemestrina
ENSCPBG00000025885	RIF1	96	73.077	ENSMLEG00000042945	RIF1	90	71.893	Mandrillus_leucophaeus
ENSCPBG00000025885	RIF1	70	51.468	ENSMAMG00000001745	rif1	64	51.466	Mastacembelus_armatus
ENSCPBG00000025885	RIF1	69	49.365	ENSMZEG00005020920	rif1	67	49.194	Maylandia_zebra
ENSCPBG00000025885	RIF1	98	78.162	ENSMGAG00000012732	RIF1	96	78.689	Meleagris_gallopavo
ENSCPBG00000025885	RIF1	90	73.757	ENSMAUG00000013158	Rif1	87	74.238	Mesocricetus_auratus
ENSCPBG00000025885	RIF1	100	62.273	ENSMICG00000046127	RIF1	91	68.557	Microcebus_murinus
ENSCPBG00000025885	RIF1	94	68.437	ENSMOCG00000009381	Rif1	88	67.257	Microtus_ochrogaster
ENSCPBG00000025885	RIF1	70	50.810	ENSMMOG00000006519	rif1	64	50.525	Mola_mola
ENSCPBG00000025885	RIF1	91	71.976	ENSMODG00000003703	RIF1	87	71.976	Monodelphis_domestica
ENSCPBG00000025885	RIF1	72	50.555	ENSMALG00000016759	rif1	74	50.555	Monopterus_albus
ENSCPBG00000025885	RIF1	95	68.622	MGP_CAROLIEiJ_G0023555	Rif1	90	67.449	Mus_caroli
ENSCPBG00000025885	RIF1	94	69.298	ENSMUSG00000036202	Rif1	89	68.129	Mus_musculus
ENSCPBG00000025885	RIF1	95	68.955	MGP_PahariEiJ_G0025006	Rif1	89	67.761	Mus_pahari
ENSCPBG00000025885	RIF1	98	69.208	MGP_SPRETEiJ_G0024476	Rif1	93	68.035	Mus_spretus
ENSCPBG00000025885	RIF1	95	73.077	ENSMPUG00000000371	RIF1	87	72.485	Mustela_putorius_furo
ENSCPBG00000025885	RIF1	85	70.920	ENSMLUG00000003376	RIF1	88	69.822	Myotis_lucifugus
ENSCPBG00000025885	RIF1	97	67.821	ENSNGAG00000009268	Rif1	94	68.247	Nannospalax_galili
ENSCPBG00000025885	RIF1	73	49.959	ENSNBRG00000014257	rif1	73	49.797	Neolamprologus_brichardi
ENSCPBG00000025885	RIF1	95	70.740	ENSNLEG00000010955	RIF1	87	69.453	Nomascus_leucogenys
ENSCPBG00000025885	RIF1	86	74.667	ENSMEUG00000007601	-	85	74.667	Notamacropus_eugenii
ENSCPBG00000025885	RIF1	96	71.810	ENSODEG00000003950	RIF1	90	70.623	Octodon_degus
ENSCPBG00000025885	RIF1	73	52.045	ENSONIG00000013657	rif1	68	51.766	Oreochromis_niloticus
ENSCPBG00000025885	RIF1	83	76.117	ENSOANG00000006078	-	79	76.117	Ornithorhynchus_anatinus
ENSCPBG00000025885	RIF1	96	61.327	ENSOCUG00000017435	RIF1	90	66.667	Oryctolagus_cuniculus
ENSCPBG00000025885	RIF1	70	49.678	ENSORLG00020001302	rif1	69	49.479	Oryzias_latipes_hni
ENSCPBG00000025885	RIF1	70	49.759	ENSORLG00015000009	rif1	68	50.000	Oryzias_latipes_hsok
ENSCPBG00000025885	RIF1	70	51.307	ENSOMEG00000021513	rif1	69	51.127	Oryzias_melastigma
ENSCPBG00000025885	RIF1	96	72.619	ENSOGAG00000006141	RIF1	89	71.513	Otolemur_garnettii
ENSCPBG00000025885	RIF1	93	67.781	ENSOARG00000008930	RIF1	86	68.177	Ovis_aries
ENSCPBG00000025885	RIF1	96	72.781	ENSPPAG00000023754	RIF1	90	71.598	Pan_paniscus
ENSCPBG00000025885	RIF1	96	72.700	ENSPPRG00000003618	RIF1	88	72.107	Panthera_pardus
ENSCPBG00000025885	RIF1	94	72.700	ENSPTIG00000020652	RIF1	86	72.107	Panthera_tigris_altaica
ENSCPBG00000025885	RIF1	96	72.700	ENSPTRG00000012534	RIF1	90	71.598	Pan_troglodytes
ENSCPBG00000025885	RIF1	96	73.373	ENSPANG00000008525	RIF1	90	72.189	Papio_anubis
ENSCPBG00000025885	RIF1	81	54.925	ENSPKIG00000004267	rif1	68	55.331	Paramormyrops_kingsleyae
ENSCPBG00000025885	RIF1	82	46.474	ENSPMGG00000016141	rif1	93	41.877	Periophthalmus_magnuspinnatus
ENSCPBG00000025885	RIF1	90	68.608	ENSPEMG00000000446	Rif1	83	69.704	Peromyscus_maniculatus_bairdii
ENSCPBG00000025885	RIF1	99	73.373	ENSPCIG00000009185	RIF1	97	73.077	Phascolarctos_cinereus
ENSCPBG00000025885	RIF1	65	52.793	ENSPFOG00000000554	-	71	52.793	Poecilia_formosa
ENSCPBG00000025885	RIF1	72	51.727	ENSPFOG00000017804	rif1	73	51.807	Poecilia_formosa
ENSCPBG00000025885	RIF1	74	52.023	ENSPLAG00000017945	rif1	73	51.272	Poecilia_latipinna
ENSCPBG00000025885	RIF1	61	51.047	ENSPMEG00000006897	-	64	51.047	Poecilia_mexicana
ENSCPBG00000025885	RIF1	74	51.360	ENSPREG00000018052	rif1	70	51.360	Poecilia_reticulata
ENSCPBG00000025885	RIF1	95	72.997	ENSPPYG00000012846	RIF1	90	71.893	Pongo_abelii
ENSCPBG00000025885	RIF1	73	77.215	ENSPCAG00000009032	RIF1	66	77.215	Procavia_capensis
ENSCPBG00000025885	RIF1	99	66.835	ENSPCOG00000027888	RIF1	92	65.909	Propithecus_coquereli
ENSCPBG00000025885	RIF1	92	70.612	ENSPVAG00000014276	RIF1	83	73.224	Pteropus_vampyrus
ENSCPBG00000025885	RIF1	67	52.760	ENSPNYG00000012940	rif1	71	50.539	Pundamilia_nyererei
ENSCPBG00000025885	RIF1	75	52.407	ENSPNAG00000016685	rif1	70	52.696	Pygocentrus_nattereri
ENSCPBG00000025885	RIF1	96	68.713	ENSRNOG00000054901	Rif1	90	67.544	Rattus_norvegicus
ENSCPBG00000025885	RIF1	95	73.887	ENSRBIG00000003704	RIF1	90	72.781	Rhinopithecus_bieti
ENSCPBG00000025885	RIF1	95	73.669	ENSRROG00000028206	RIF1	90	72.485	Rhinopithecus_roxellana
ENSCPBG00000025885	RIF1	93	73.964	ENSSBOG00000029530	RIF1	90	72.781	Saimiri_boliviensis_boliviensis
ENSCPBG00000025885	RIF1	99	74.118	ENSSHAG00000018552	RIF1	95	74.118	Sarcophilus_harrisii
ENSCPBG00000025885	RIF1	73	53.942	ENSSFOG00015021539	rif1	96	55.967	Scleropages_formosus
ENSCPBG00000025885	RIF1	70	51.592	ENSSMAG00000011704	rif1	61	51.429	Scophthalmus_maximus
ENSCPBG00000025885	RIF1	69	53.184	ENSSDUG00000015632	rif1	71	52.649	Seriola_dumerili
ENSCPBG00000025885	RIF1	69	52.023	ENSSLDG00000019531	rif1	65	51.595	Seriola_lalandi_dorsalis
ENSCPBG00000025885	RIF1	57	67.559	ENSSARG00000007161	-	50	67.559	Sorex_araneus
ENSCPBG00000025885	RIF1	96	78.579	ENSSPUG00000003062	RIF1	92	78.814	Sphenodon_punctatus
ENSCPBG00000025885	RIF1	68	57.647	ENSSPAG00000018359	rif1	76	58.218	Stegastes_partitus
ENSCPBG00000025885	RIF1	97	67.620	ENSSSCG00000016395	RIF1	90	67.598	Sus_scrofa
ENSCPBG00000025885	RIF1	50	74.640	ENSTGUG00000016761	RIF1	95	83.544	Taeniopygia_guttata
ENSCPBG00000025885	RIF1	69	49.116	ENSTRUG00000015808	rif1	87	44.090	Takifugu_rubripes
ENSCPBG00000025885	RIF1	71	49.881	ENSTNIG00000011538	rif1	72	49.015	Tetraodon_nigroviridis
ENSCPBG00000025885	RIF1	77	69.136	ENSTBEG00000016082	RIF1	71	69.136	Tupaia_belangeri
ENSCPBG00000025885	RIF1	97	70.474	ENSTTRG00000011190	RIF1	90	69.359	Tursiops_truncatus
ENSCPBG00000025885	RIF1	88	69.252	ENSUAMG00000026385	RIF1	89	68.698	Ursus_americanus
ENSCPBG00000025885	RIF1	98	68.975	ENSUMAG00000000337	RIF1	91	68.421	Ursus_maritimus
ENSCPBG00000025885	RIF1	96	71.217	ENSVPAG00000002162	RIF1	90	70.030	Vicugna_pacos
ENSCPBG00000025885	RIF1	99	72.485	ENSVVUG00000011293	RIF1	95	71.302	Vulpes_vulpes
ENSCPBG00000025885	RIF1	95	63.043	ENSXETG00000004530	rif1	89	62.772	Xenopus_tropicalis
ENSCPBG00000025885	RIF1	75	50.568	ENSXMAG00000000506	rif1	70	50.933	Xiphophorus_maculatus