EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000025968 (Gene tree)
Gene ID: 101931129
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 34204 bases
Position: chrKK088219.1:7500184-7534387
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037498	ResIII	PF04851.15	5.2e-07	1	1
ENSCPBP00000037495	ResIII	PF04851.15	6.3e-07	1	1
ENSCPBP00000037496	ResIII	PF04851.15	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000043967	SBNO1-201	4397	-	ENSCPBP00000037495	1408 (aa)	XP_005298760	UPI000388E63F
ENSCPBT00000043968	SBNO1-202	4292	-	ENSCPBP00000037496	1373 (aa)	XP_023957157	UPI000388A1DA
ENSCPBT00000043970	SBNO1-203	4148	-	ENSCPBP00000037498	1336 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000025968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000025968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000025968	SBNO1	72	68.707	ENSCPBG00000008920	SBNO2	79	68.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000025968	SBNO1	99	92.103	ENSG00000139697	SBNO1	100	92.247	Homo_sapiens
ENSCPBG00000025968	SBNO1	84	81.039	ENSAPOG00000003196	sbno1	96	81.322	Acanthochromis_polyacanthus
ENSCPBG00000025968	SBNO1	99	91.840	ENSAMEG00000015151	SBNO1	100	92.054	Ailuropoda_melanoleuca
ENSCPBG00000025968	SBNO1	98	76.163	ENSACIG00000008088	sbno1	98	76.419	Amphilophus_citrinellus
ENSCPBG00000025968	SBNO1	99	75.088	ENSAOCG00000014859	sbno1	97	75.090	Amphiprion_ocellaris
ENSCPBG00000025968	SBNO1	99	74.876	ENSAPEG00000006069	sbno1	97	75.090	Amphiprion_percula
ENSCPBG00000025968	SBNO1	99	76.217	ENSATEG00000006667	sbno1	98	76.323	Anabas_testudineus
ENSCPBG00000025968	SBNO1	99	95.758	ENSAPLG00000015674	SBNO1	100	95.758	Anas_platyrhynchos
ENSCPBG00000025968	SBNO1	99	92.826	ENSACAG00000015441	SBNO1	89	92.893	Anolis_carolinensis
ENSCPBG00000025968	SBNO1	99	92.047	ENSANAG00000029958	-	99	93.972	Aotus_nancymaae
ENSCPBG00000025968	SBNO1	98	75.570	ENSACLG00000024913	sbno1	98	76.493	Astatotilapia_calliptera
ENSCPBG00000025968	SBNO1	99	79.544	ENSAMXG00000019473	sbno1	98	79.782	Astyanax_mexicanus
ENSCPBG00000025968	SBNO1	99	91.960	ENSBTAG00000020505	SBNO1	98	92.568	Bos_taurus
ENSCPBG00000025968	SBNO1	99	91.750	ENSCJAG00000016599	SBNO1	100	91.894	Callithrix_jacchus
ENSCPBG00000025968	SBNO1	99	91.977	ENSCAFG00000007503	SBNO1	97	95.833	Canis_familiaris
ENSCPBG00000025968	SBNO1	99	91.248	ENSCAFG00020015363	SBNO1	100	92.294	Canis_lupus_dingo
ENSCPBG00000025968	SBNO1	99	92.026	ENSCHIG00000008382	SBNO1	98	95.104	Capra_hircus
ENSCPBG00000025968	SBNO1	99	92.268	ENSTSYG00000012749	SBNO1	100	92.784	Carlito_syrichta
ENSCPBG00000025968	SBNO1	96	92.331	ENSCAPG00000000384	SBNO1	99	94.964	Cavia_aperea
ENSCPBG00000025968	SBNO1	99	91.744	ENSCPOG00000008109	SBNO1	100	94.624	Cavia_porcellus
ENSCPBG00000025968	SBNO1	99	87.670	ENSCCAG00000035316	SBNO1	100	88.767	Cebus_capucinus
ENSCPBG00000025968	SBNO1	97	91.460	ENSCATG00000008239	SBNO1	98	95.144	Cercocebus_atys
ENSCPBG00000025968	SBNO1	99	91.822	ENSCLAG00000008995	SBNO1	100	94.803	Chinchilla_lanigera
ENSCPBG00000025968	SBNO1	84	93.960	ENSCSAG00000002064	SBNO1	100	94.219	Chlorocebus_sabaeus
ENSCPBG00000025968	SBNO1	94	89.327	ENSCHOG00000008814	SBNO1	96	89.327	Choloepus_hoffmanni
ENSCPBG00000025968	SBNO1	99	87.097	ENSCANG00000042688	-	100	87.168	Colobus_angolensis_palliatus
ENSCPBG00000025968	SBNO1	99	91.457	ENSCGRG00001017470	Sbno1	100	93.369	Cricetulus_griseus_chok1gshd
ENSCPBG00000025968	SBNO1	99	91.457	ENSCGRG00000004756	Sbno1	100	93.369	Cricetulus_griseus_crigri
ENSCPBG00000025968	SBNO1	99	74.682	ENSCSEG00000011919	sbno1	98	75.341	Cynoglossus_semilaevis
ENSCPBG00000025968	SBNO1	99	75.194	ENSCVAG00000007038	sbno1	98	75.782	Cyprinodon_variegatus
ENSCPBG00000025968	SBNO1	98	79.041	ENSDARG00000099080	sbno1	98	79.418	Danio_rerio
ENSCPBG00000025968	SBNO1	99	89.899	ENSDNOG00000017147	SBNO1	98	92.197	Dasypus_novemcinctus
ENSCPBG00000025968	SBNO1	99	80.645	ENSDORG00000015261	Sbno1	99	92.529	Dipodomys_ordii
ENSCPBG00000025968	SBNO1	92	84.953	ENSETEG00000005620	SBNO1	93	84.953	Echinops_telfairi
ENSCPBG00000025968	SBNO1	77	63.035	ENSEBUG00000013823	sbno1	94	61.998	Eptatretus_burgeri
ENSCPBG00000025968	SBNO1	53	87.960	ENSEASG00005012595	-	92	92.878	Equus_asinus_asinus
ENSCPBG00000025968	SBNO1	99	92.324	ENSECAG00000006127	SBNO1	100	92.539	Equus_caballus
ENSCPBG00000025968	SBNO1	81	91.758	ENSEEUG00000003793	SBNO1	83	91.758	Erinaceus_europaeus
ENSCPBG00000025968	SBNO1	99	78.156	ENSELUG00000002886	sbno1	98	78.540	Esox_lucius
ENSCPBG00000025968	SBNO1	99	92.247	ENSFCAG00000015331	SBNO1	99	92.391	Felis_catus
ENSCPBG00000025968	SBNO1	99	95.471	ENSFALG00000009273	SBNO1	100	95.471	Ficedula_albicollis
ENSCPBG00000025968	SBNO1	99	90.302	ENSFDAG00000014232	SBNO1	99	90.445	Fukomys_damarensis
ENSCPBG00000025968	SBNO1	99	75.904	ENSFHEG00000007360	sbno1	98	76.318	Fundulus_heteroclitus
ENSCPBG00000025968	SBNO1	95	78.343	ENSGMOG00000018229	sbno1	98	78.682	Gadus_morhua
ENSCPBG00000025968	SBNO1	92	95.925	ENSGALG00000003392	SBNO1	99	95.925	Gallus_gallus
ENSCPBG00000025968	SBNO1	98	77.273	ENSGAFG00000003960	sbno1	97	77.778	Gambusia_affinis
ENSCPBG00000025968	SBNO1	95	78.241	ENSGACG00000015633	sbno1	98	78.268	Gasterosteus_aculeatus
ENSCPBG00000025968	SBNO1	99	98.344	ENSGAGG00000001065	SBNO1	99	99.466	Gopherus_agassizii
ENSCPBG00000025968	SBNO1	99	92.047	ENSGGOG00000015000	SBNO1	99	94.982	Gorilla_gorilla
ENSCPBG00000025968	SBNO1	98	70.044	ENSHBUG00000011910	sbno1	98	70.961	Haplochromis_burtoni
ENSCPBG00000025968	SBNO1	99	91.750	ENSHGLG00000014165	-	99	93.993	Heterocephalus_glaber_female
ENSCPBG00000025968	SBNO1	92	85.375	ENSHCOG00000003246	sbno1	95	85.375	Hippocampus_comes
ENSCPBG00000025968	SBNO1	99	78.663	ENSIPUG00000015830	Sbno1	98	78.862	Ictalurus_punctatus
ENSCPBG00000025968	SBNO1	99	92.121	ENSSTOG00000023221	SBNO1	100	94.444	Ictidomys_tridecemlineatus
ENSCPBG00000025968	SBNO1	99	92.037	ENSJJAG00000001741	Sbno1	100	92.037	Jaculus_jaculus
ENSCPBG00000025968	SBNO1	98	76.957	ENSKMAG00000009696	sbno1	98	77.083	Kryptolebias_marmoratus
ENSCPBG00000025968	SBNO1	99	75.582	ENSLBEG00000007623	sbno1	98	75.680	Labrus_bergylta
ENSCPBG00000025968	SBNO1	98	82.916	ENSLACG00000017227	SBNO1	99	85.425	Latimeria_chalumnae
ENSCPBG00000025968	SBNO1	99	82.278	ENSLOCG00000005725	sbno1	98	82.705	Lepisosteus_oculatus
ENSCPBG00000025968	SBNO1	99	91.320	ENSLAFG00000002135	SBNO1	100	91.320	Loxodonta_africana
ENSCPBG00000025968	SBNO1	99	92.253	ENSMFAG00000031429	SBNO1	100	92.253	Macaca_fascicularis
ENSCPBG00000025968	SBNO1	99	92.319	ENSMMUG00000011496	SBNO1	100	92.319	Macaca_mulatta
ENSCPBG00000025968	SBNO1	99	90.943	ENSMLEG00000033260	SBNO1	100	94.803	Mandrillus_leucophaeus
ENSCPBG00000025968	SBNO1	99	75.865	ENSMAMG00000005473	sbno1	98	76.204	Mastacembelus_armatus
ENSCPBG00000025968	SBNO1	99	96.112	ENSMGAG00000003274	SBNO1	100	96.112	Meleagris_gallopavo
ENSCPBG00000025968	SBNO1	52	87.787	ENSMAUG00000004834	-	100	92.308	Mesocricetus_auratus
ENSCPBG00000025968	SBNO1	99	91.392	ENSMICG00000006573	-	100	91.535	Microcebus_murinus
ENSCPBG00000025968	SBNO1	94	94.604	ENSMOCG00000009390	Sbno1	100	94.265	Microtus_ochrogaster
ENSCPBG00000025968	SBNO1	98	73.634	ENSMMOG00000008691	sbno1	97	73.540	Mola_mola
ENSCPBG00000025968	SBNO1	99	93.108	ENSMODG00000012470	SBNO1	99	93.396	Monodelphis_domestica
ENSCPBG00000025968	SBNO1	99	75.088	ENSMALG00000001056	sbno1	98	75.036	Monopterus_albus
ENSCPBG00000025968	SBNO1	99	91.876	MGP_CAROLIEiJ_G0027749	Sbno1	95	97.368	Mus_caroli
ENSCPBG00000025968	SBNO1	99	91.876	ENSMUSG00000038095	Sbno1	100	92.459	Mus_musculus
ENSCPBG00000025968	SBNO1	99	92.081	MGP_PahariEiJ_G0024329	Sbno1	95	97.368	Mus_pahari
ENSCPBG00000025968	SBNO1	99	91.733	MGP_SPRETEiJ_G0028747	Sbno1	100	92.459	Mus_spretus
ENSCPBG00000025968	SBNO1	99	92.324	ENSMPUG00000001658	SBNO1	100	92.468	Mustela_putorius_furo
ENSCPBG00000025968	SBNO1	99	91.966	ENSMLUG00000017159	SBNO1	100	92.109	Myotis_lucifugus
ENSCPBG00000025968	SBNO1	99	92.109	ENSNGAG00000012620	Sbno1	98	94.942	Nannospalax_galili
ENSCPBG00000025968	SBNO1	98	75.257	ENSNBRG00000019189	sbno1	98	76.173	Neolamprologus_brichardi
ENSCPBG00000025968	SBNO1	99	88.299	ENSNLEG00000001502	SBNO1	99	89.770	Nomascus_leucogenys
ENSCPBG00000025968	SBNO1	70	78.088	ENSMEUG00000008768	-	93	87.975	Notamacropus_eugenii
ENSCPBG00000025968	SBNO1	99	88.961	ENSOPRG00000011054	SBNO1	100	89.247	Ochotona_princeps
ENSCPBG00000025968	SBNO1	99	92.103	ENSODEG00000009997	SBNO1	100	94.444	Octodon_degus
ENSCPBG00000025968	SBNO1	99	74.401	ENSONIG00000015348	sbno1	98	75.340	Oreochromis_niloticus
ENSCPBG00000025968	SBNO1	98	90.008	ENSOCUG00000002441	SBNO1	93	92.056	Oryctolagus_cuniculus
ENSCPBG00000025968	SBNO1	99	75.018	ENSORLG00000001593	sbno1	99	74.545	Oryzias_latipes
ENSCPBG00000025968	SBNO1	99	75.071	ENSORLG00020015216	sbno1	98	74.946	Oryzias_latipes_hni
ENSCPBG00000025968	SBNO1	99	75.177	ENSORLG00015002726	sbno1	98	74.982	Oryzias_latipes_hsok
ENSCPBG00000025968	SBNO1	98	75.035	ENSOMEG00000019313	sbno1	98	75.036	Oryzias_melastigma
ENSCPBG00000025968	SBNO1	52	84.914	ENSOGAG00000010781	-	100	89.759	Otolemur_garnettii
ENSCPBG00000025968	SBNO1	99	91.822	ENSOARG00000004404	SBNO1	98	92.398	Ovis_aries
ENSCPBG00000025968	SBNO1	99	92.121	ENSPPAG00000024635	SBNO1	99	95.161	Pan_paniscus
ENSCPBG00000025968	SBNO1	99	92.247	ENSPPRG00000022092	SBNO1	99	92.391	Panthera_pardus
ENSCPBG00000025968	SBNO1	99	92.026	ENSPTIG00000017803	SBNO1	100	92.241	Panthera_tigris_altaica
ENSCPBG00000025968	SBNO1	99	92.047	ENSPTRG00000005597	SBNO1	99	94.982	Pan_troglodytes
ENSCPBG00000025968	SBNO1	99	92.121	ENSPANG00000011640	SBNO1	100	94.803	Papio_anubis
ENSCPBG00000025968	SBNO1	98	81.116	ENSPKIG00000001441	sbno1	98	81.195	Paramormyrops_kingsleyae
ENSCPBG00000025968	SBNO1	96	92.996	ENSPSIG00000009256	-	100	93.468	Pelodiscus_sinensis
ENSCPBG00000025968	SBNO1	99	98.301	ENSPSIG00000009572	-	100	98.301	Pelodiscus_sinensis
ENSCPBG00000025968	SBNO1	99	91.385	ENSPEMG00000016087	Sbno1	100	93.548	Peromyscus_maniculatus_bairdii
ENSCPBG00000025968	SBNO1	99	92.960	ENSPCIG00000010985	SBNO1	99	93.368	Phascolarctos_cinereus
ENSCPBG00000025968	SBNO1	99	75.779	ENSPFOG00000005069	sbno1	98	76.242	Poecilia_formosa
ENSCPBG00000025968	SBNO1	99	75.637	ENSPLAG00000015015	sbno1	98	76.170	Poecilia_latipinna
ENSCPBG00000025968	SBNO1	99	75.796	ENSPMEG00000021212	sbno1	98	76.259	Poecilia_mexicana
ENSCPBG00000025968	SBNO1	99	75.372	ENSPREG00000017746	sbno1	98	75.827	Poecilia_reticulata
ENSCPBG00000025968	SBNO1	99	91.960	ENSPPYG00000005084	SBNO1	100	92.032	Pongo_abelii
ENSCPBG00000025968	SBNO1	83	90.541	ENSPCAG00000008634	SBNO1	88	86.915	Procavia_capensis
ENSCPBG00000025968	SBNO1	99	92.468	ENSPCOG00000024277	SBNO1	99	95.091	Propithecus_coquereli
ENSCPBG00000025968	SBNO1	86	94.643	ENSPVAG00000015304	SBNO1	87	94.643	Pteropus_vampyrus
ENSCPBG00000025968	SBNO1	99	74.788	ENSPNYG00000004291	sbno1	98	75.527	Pundamilia_nyererei
ENSCPBG00000025968	SBNO1	99	79.259	ENSPNAG00000015622	sbno1	98	79.375	Pygocentrus_nattereri
ENSCPBG00000025968	SBNO1	99	91.882	ENSRNOG00000001064	Sbno1	99	94.614	Rattus_norvegicus
ENSCPBG00000025968	SBNO1	99	92.194	ENSRROG00000034230	SBNO1	100	94.803	Rhinopithecus_roxellana
ENSCPBG00000025968	SBNO1	96	87.245	ENSSBOG00000015422	SBNO1	100	87.732	Saimiri_boliviensis_boliviensis
ENSCPBG00000025968	SBNO1	98	81.163	ENSSFOG00015019025	sbno1	98	81.920	Scleropages_formosus
ENSCPBG00000025968	SBNO1	99	75.743	ENSSMAG00000013640	sbno1	98	76.225	Scophthalmus_maximus
ENSCPBG00000025968	SBNO1	99	75.424	ENSSDUG00000023480	sbno1	98	75.447	Seriola_dumerili
ENSCPBG00000025968	SBNO1	99	75.353	ENSSLDG00000007928	sbno1	98	75.376	Seriola_lalandi_dorsalis
ENSCPBG00000025968	SBNO1	88	92.246	ENSSARG00000002594	SBNO1	89	92.407	Sorex_araneus
ENSCPBG00000025968	SBNO1	99	94.617	ENSSPUG00000012640	SBNO1	100	95.133	Sphenodon_punctatus
ENSCPBG00000025968	SBNO1	99	75.000	ENSSPAG00000016244	sbno1	98	75.143	Stegastes_partitus
ENSCPBG00000025968	SBNO1	99	92.606	ENSSSCG00000009776	SBNO1	100	92.606	Sus_scrofa
ENSCPBG00000025968	SBNO1	99	95.399	ENSTGUG00000005380	SBNO1	100	95.399	Taeniopygia_guttata
ENSCPBG00000025968	SBNO1	98	77.206	ENSTRUG00000018490	sbno1	98	77.222	Takifugu_rubripes
ENSCPBG00000025968	SBNO1	58	70.384	ENSTNIG00000013506	sbno1	99	70.559	Tetraodon_nigroviridis
ENSCPBG00000025968	SBNO1	99	92.109	ENSUAMG00000019671	SBNO1	100	92.324	Ursus_americanus
ENSCPBG00000025968	SBNO1	99	92.109	ENSUMAG00000004002	SBNO1	100	92.324	Ursus_maritimus
ENSCPBG00000025968	SBNO1	96	87.198	ENSVPAG00000007024	SBNO1	92	87.432	Vicugna_pacos
ENSCPBG00000025968	SBNO1	99	92.181	ENSVVUG00000027807	SBNO1	100	92.396	Vulpes_vulpes
ENSCPBG00000025968	SBNO1	99	82.487	ENSXETG00000031930	SBNO1	99	81.987	Xenopus_tropicalis
ENSCPBG00000025968	SBNO1	91	75.223	ENSXCOG00000011607	sbno1	95	75.612	Xiphophorus_couchianus
ENSCPBG00000025968	SBNO1	98	77.199	ENSXMAG00000002140	sbno1	98	76.509	Xiphophorus_maculatus