EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026060 (Gene tree)
Gene ID: 101932126
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 3230 bases
Position: chrKK083131.1:1058874-1062103
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037631	RRM_1	PF00076.22	7.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044128	-	1476	-	ENSCPBP00000037631	178 (aa)	XP_005290224	UPI00046C2271

Gene Model

Click here to download ENSCPBG00000026060's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026060	-	94	92.814	ENSG00000258643	BCL2L2-PABPN1	50	92.814	Homo_sapiens
ENSCPBG00000026060	-	94	92.814	ENSG00000100836	PABPN1	94	92.814	Homo_sapiens
ENSCPBG00000026060	-	94	84.524	ENSAPOG00000016425	pabpn1	71	84.524	Acanthochromis_polyacanthus
ENSCPBG00000026060	-	94	92.814	ENSAMEG00000007048	BCL2L2-PABPN1	88	92.814	Ailuropoda_melanoleuca
ENSCPBG00000026060	-	94	83.929	ENSACIG00000021744	pabpn1	94	83.929	Amphilophus_citrinellus
ENSCPBG00000026060	-	94	84.524	ENSAOCG00000015805	pabpn1	71	84.524	Amphiprion_ocellaris
ENSCPBG00000026060	-	94	84.524	ENSAPEG00000009623	pabpn1	71	84.524	Amphiprion_percula
ENSCPBG00000026060	-	94	84.524	ENSATEG00000020531	pabpn1	71	84.524	Anabas_testudineus
ENSCPBG00000026060	-	94	95.238	ENSACAG00000006185	-	60	95.238	Anolis_carolinensis
ENSCPBG00000026060	-	94	92.814	ENSANAG00000024513	-	60	92.814	Aotus_nancymaae
ENSCPBG00000026060	-	89	83.019	ENSACLG00000016374	pabpn1	53	83.019	Astatotilapia_calliptera
ENSCPBG00000026060	-	94	84.524	ENSAMXG00000000452	pabpn1	94	84.524	Astyanax_mexicanus
ENSCPBG00000026060	-	94	80.240	ENSBTAG00000050594	-	57	80.240	Bos_taurus
ENSCPBG00000026060	-	94	92.814	ENSBTAG00000006884	PABPN1	55	92.814	Bos_taurus
ENSCPBG00000026060	-	94	91.018	ENSBTAG00000053753	-	62	91.018	Bos_taurus
ENSCPBG00000026060	-	74	61.364	WBGene00003904	pabp-2	79	55.357	Caenorhabditis_elegans
ENSCPBG00000026060	-	94	91.018	ENSCJAG00000004407	-	84	91.018	Callithrix_jacchus
ENSCPBG00000026060	-	94	92.814	ENSCJAG00000007960	-	62	92.814	Callithrix_jacchus
ENSCPBG00000026060	-	94	92.814	ENSCAFG00000011482	PABPN1	55	92.814	Canis_familiaris
ENSCPBG00000026060	-	94	92.814	ENSCAFG00020007298	-	55	92.814	Canis_lupus_dingo
ENSCPBG00000026060	-	94	92.814	ENSCAFG00020006651	-	55	92.814	Canis_lupus_dingo
ENSCPBG00000026060	-	94	92.814	ENSCHIG00000012184	PABPN1	55	92.814	Capra_hircus
ENSCPBG00000026060	-	94	92.814	ENSTSYG00000033996	BCL2L2-PABPN1	94	92.814	Carlito_syrichta
ENSCPBG00000026060	-	78	90.580	ENSCAPG00000009461	-	99	90.580	Cavia_aperea
ENSCPBG00000026060	-	94	92.216	ENSCPOG00000025574	PABPN1	55	92.216	Cavia_porcellus
ENSCPBG00000026060	-	94	92.814	ENSCCAG00000033954	BCL2L2-PABPN1	62	92.814	Cebus_capucinus
ENSCPBG00000026060	-	94	92.814	ENSCATG00000038536	BCL2L2-PABPN1	62	92.814	Cercocebus_atys
ENSCPBG00000026060	-	85	90.132	ENSCLAG00000012423	PABPN1	57	90.132	Chinchilla_lanigera
ENSCPBG00000026060	-	94	91.617	ENSCSAG00000016036	PABPN1	55	91.617	Chlorocebus_sabaeus
ENSCPBG00000026060	-	94	85.030	ENSCHOG00000004798	BCL2L2-PABPN1	72	85.030	Choloepus_hoffmanni
ENSCPBG00000026060	-	100	62.921	ENSCING00000012468	-	69	64.671	Ciona_intestinalis
ENSCPBG00000026060	-	100	61.236	ENSCSAVG00000002001	-	93	62.874	Ciona_savignyi
ENSCPBG00000026060	-	94	92.814	ENSCANG00000009750	BCL2L2-PABPN1	94	92.814	Colobus_angolensis_palliatus
ENSCPBG00000026060	-	94	80.240	ENSCANG00000030980	-	59	77.246	Colobus_angolensis_palliatus
ENSCPBG00000026060	-	94	93.413	ENSCGRG00001019696	Pabpn1	94	93.413	Cricetulus_griseus_chok1gshd
ENSCPBG00000026060	-	94	93.413	ENSCGRG00000011102	Pabpn1	94	93.413	Cricetulus_griseus_crigri
ENSCPBG00000026060	-	94	83.333	ENSCSEG00000008774	pabpn1	71	83.333	Cynoglossus_semilaevis
ENSCPBG00000026060	-	94	80.357	ENSCVAG00000003152	pabpn1	71	83.333	Cyprinodon_variegatus
ENSCPBG00000026060	-	94	83.929	ENSDARG00000045373	pabpn1	71	83.974	Danio_rerio
ENSCPBG00000026060	-	75	62.406	ENSDARG00000087996	pabpn1l	80	63.359	Danio_rerio
ENSCPBG00000026060	-	94	92.814	ENSDNOG00000023682	PABPN1	55	92.814	Dasypus_novemcinctus
ENSCPBG00000026060	-	94	91.617	ENSDORG00000028966	-	55	91.617	Dipodomys_ordii
ENSCPBG00000026060	-	75	89.474	ENSDORG00000023928	-	85	89.344	Dipodomys_ordii
ENSCPBG00000026060	-	100	63.483	FBgn0005648	Pabp2	71	62.874	Drosophila_melanogaster
ENSCPBG00000026060	-	100	78.771	ENSEBUG00000002322	pabpn1	72	77.976	Eptatretus_burgeri
ENSCPBG00000026060	-	94	92.814	ENSEASG00005011716	PABPN1	55	92.814	Equus_asinus_asinus
ENSCPBG00000026060	-	93	92.121	ENSECAG00000011652	PABPN1	52	92.258	Equus_caballus
ENSCPBG00000026060	-	94	89.222	ENSEEUG00000012973	-	57	89.222	Erinaceus_europaeus
ENSCPBG00000026060	-	94	85.714	ENSELUG00000022654	pabpn1	70	85.714	Esox_lucius
ENSCPBG00000026060	-	94	92.814	ENSFCAG00000031922	PABPN1	55	92.814	Felis_catus
ENSCPBG00000026060	-	94	91.617	ENSFDAG00000018381	BCL2L2-PABPN1	94	91.617	Fukomys_damarensis
ENSCPBG00000026060	-	94	77.381	ENSFHEG00000007215	pabpn1	71	80.952	Fundulus_heteroclitus
ENSCPBG00000026060	-	87	84.615	ENSGMOG00000003922	pabpn1	54	84.615	Gadus_morhua
ENSCPBG00000026060	-	94	84.024	ENSGAFG00000017099	pabpn1	71	84.024	Gambusia_affinis
ENSCPBG00000026060	-	94	80.000	ENSGACG00000002167	pabpn1	73	80.000	Gasterosteus_aculeatus
ENSCPBG00000026060	-	94	75.449	ENSGGOG00000039675	-	61	75.449	Gorilla_gorilla
ENSCPBG00000026060	-	94	92.814	ENSGGOG00000022683	-	62	92.814	Gorilla_gorilla
ENSCPBG00000026060	-	94	79.042	ENSGGOG00000025919	-	98	77.027	Gorilla_gorilla
ENSCPBG00000026060	-	94	83.929	ENSHBUG00000019523	pabpn1	71	83.929	Haplochromis_burtoni
ENSCPBG00000026060	-	94	71.856	ENSHGLG00000009842	-	93	71.856	Heterocephalus_glaber_female
ENSCPBG00000026060	-	93	77.108	ENSHGLG00000018588	-	54	77.108	Heterocephalus_glaber_female
ENSCPBG00000026060	-	94	92.216	ENSHGLG00000002927	-	86	97.059	Heterocephalus_glaber_female
ENSCPBG00000026060	-	93	77.108	ENSHGLG00100015565	-	56	77.108	Heterocephalus_glaber_male
ENSCPBG00000026060	-	94	92.216	ENSHGLG00100006673	-	94	92.216	Heterocephalus_glaber_male
ENSCPBG00000026060	-	94	80.240	ENSHGLG00100018935	-	94	82.456	Heterocephalus_glaber_male
ENSCPBG00000026060	-	94	79.042	ENSHCOG00000004655	pabpn1	71	83.333	Hippocampus_comes
ENSCPBG00000026060	-	94	81.548	ENSIPUG00000000180	-	73	81.548	Ictalurus_punctatus
ENSCPBG00000026060	-	94	83.929	ENSIPUG00000008085	PABPN1	71	83.929	Ictalurus_punctatus
ENSCPBG00000026060	-	94	92.814	ENSSTOG00000029847	BCL2L2-PABPN1	94	92.814	Ictidomys_tridecemlineatus
ENSCPBG00000026060	-	94	92.814	ENSJJAG00000023507	Gm20521	94	92.814	Jaculus_jaculus
ENSCPBG00000026060	-	94	82.840	ENSKMAG00000018748	pabpn1	71	82.840	Kryptolebias_marmoratus
ENSCPBG00000026060	-	94	84.524	ENSLBEG00000027266	pabpn1	71	84.524	Labrus_bergylta
ENSCPBG00000026060	-	87	83.333	ENSLACG00000000646	pabpn1	68	85.897	Latimeria_chalumnae
ENSCPBG00000026060	-	87	83.333	ENSLOCG00000000796	pabpn1	56	83.333	Lepisosteus_oculatus
ENSCPBG00000026060	-	100	66.480	ENSLOCG00000004694	pabpn1l	76	65.476	Lepisosteus_oculatus
ENSCPBG00000026060	-	85	91.391	ENSLAFG00000031227	-	100	91.391	Loxodonta_africana
ENSCPBG00000026060	-	79	85.106	ENSMFAG00000031355	-	99	85.106	Macaca_fascicularis
ENSCPBG00000026060	-	94	92.814	ENSMFAG00000032183	BCL2L2-PABPN1	94	92.814	Macaca_fascicularis
ENSCPBG00000026060	-	84	82.550	ENSMMUG00000048382	-	50	82.550	Macaca_mulatta
ENSCPBG00000026060	-	94	92.814	ENSMMUG00000014747	BCL2L2-PABPN1	100	91.781	Macaca_mulatta
ENSCPBG00000026060	-	94	78.571	ENSMNEG00000035750	-	99	85.106	Macaca_nemestrina
ENSCPBG00000026060	-	94	92.814	ENSMNEG00000045065	BCL2L2-PABPN1	62	92.814	Macaca_nemestrina
ENSCPBG00000026060	-	94	92.814	ENSMLEG00000043862	BCL2L2-PABPN1	94	92.814	Mandrillus_leucophaeus
ENSCPBG00000026060	-	94	75.595	ENSMLEG00000034623	-	99	82.979	Mandrillus_leucophaeus
ENSCPBG00000026060	-	87	84.615	ENSMAMG00000007979	pabpn1	56	83.636	Mastacembelus_armatus
ENSCPBG00000026060	-	87	83.974	ENSMZEG00005011904	pabpn1	54	83.974	Maylandia_zebra
ENSCPBG00000026060	-	94	93.413	ENSMAUG00000007383	Gm20521	56	93.413	Mesocricetus_auratus
ENSCPBG00000026060	-	94	92.814	ENSMICG00000010002	BCL2L2-PABPN1	62	92.814	Microcebus_murinus
ENSCPBG00000026060	-	94	92.814	ENSMOCG00000018557	Gm20521	83	98.529	Microtus_ochrogaster
ENSCPBG00000026060	-	94	84.524	ENSMMOG00000005405	pabpn1	71	84.524	Mola_mola
ENSCPBG00000026060	-	92	91.463	ENSMODG00000004535	-	54	91.463	Monodelphis_domestica
ENSCPBG00000026060	-	87	84.615	ENSMALG00000019612	pabpn1	55	83.636	Monopterus_albus
ENSCPBG00000026060	-	94	92.216	MGP_CAROLIEiJ_G0019276	Gm20521	50	92.216	Mus_caroli
ENSCPBG00000026060	-	94	92.216	MGP_CAROLIEiJ_G0019277	Pabpn1	94	92.216	Mus_caroli
ENSCPBG00000026060	-	94	92.814	ENSMUSG00000092232	Gm20521	50	92.814	Mus_musculus
ENSCPBG00000026060	-	94	92.814	ENSMUSG00000022194	Pabpn1	94	92.814	Mus_musculus
ENSCPBG00000026060	-	94	92.814	MGP_PahariEiJ_G0030294	Gm20521	50	92.814	Mus_pahari
ENSCPBG00000026060	-	94	92.814	MGP_PahariEiJ_G0030295	Pabpn1	100	100.000	Mus_pahari
ENSCPBG00000026060	-	94	92.814	MGP_SPRETEiJ_G0020165	Gm20521	50	92.814	Mus_spretus
ENSCPBG00000026060	-	94	92.814	MGP_SPRETEiJ_G0020166	Pabpn1	94	92.814	Mus_spretus
ENSCPBG00000026060	-	87	92.258	ENSMPUG00000006775	-	92	92.258	Mustela_putorius_furo
ENSCPBG00000026060	-	94	91.018	ENSMLUG00000028677	-	61	91.018	Myotis_lucifugus
ENSCPBG00000026060	-	100	93.258	ENSMLUG00000003800	-	88	93.413	Myotis_lucifugus
ENSCPBG00000026060	-	94	88.757	ENSMLUG00000012452	-	55	89.349	Myotis_lucifugus
ENSCPBG00000026060	-	94	92.814	ENSNGAG00000019529	Gm20521	50	92.814	Nannospalax_galili
ENSCPBG00000026060	-	94	83.929	ENSNBRG00000023955	pabpn1	94	83.929	Neolamprologus_brichardi
ENSCPBG00000026060	-	92	76.687	ENSNLEG00000030598	-	61	75.904	Nomascus_leucogenys
ENSCPBG00000026060	-	94	92.814	ENSNLEG00000015007	-	59	92.814	Nomascus_leucogenys
ENSCPBG00000026060	-	83	67.568	ENSNLEG00000035292	-	99	67.568	Nomascus_leucogenys
ENSCPBG00000026060	-	94	80.240	ENSODEG00000003739	-	55	80.240	Octodon_degus
ENSCPBG00000026060	-	94	92.216	ENSODEG00000002083	BCL2L2-PABPN1	55	92.216	Octodon_degus
ENSCPBG00000026060	-	100	80.337	ENSODEG00000011555	-	89	79.641	Octodon_degus
ENSCPBG00000026060	-	87	83.974	ENSONIG00000008112	pabpn1	54	83.974	Oreochromis_niloticus
ENSCPBG00000026060	-	82	93.836	ENSOANG00000009218	-	100	93.836	Ornithorhynchus_anatinus
ENSCPBG00000026060	-	94	92.216	ENSOCUG00000016174	PABPN1	61	92.216	Oryctolagus_cuniculus
ENSCPBG00000026060	-	93	80.723	ENSORLG00000027900	pabpn1	69	80.723	Oryzias_latipes
ENSCPBG00000026060	-	82	86.986	ENSORLG00020004681	pabpn1	55	83.636	Oryzias_latipes_hni
ENSCPBG00000026060	-	94	84.524	ENSORLG00015000018	pabpn1	71	84.524	Oryzias_latipes_hsok
ENSCPBG00000026060	-	93	80.723	ENSOMEG00000016618	pabpn1	59	80.723	Oryzias_melastigma
ENSCPBG00000026060	-	94	92.814	ENSOGAG00000008710	PABPN1	55	92.814	Otolemur_garnettii
ENSCPBG00000026060	-	94	76.647	ENSPPAG00000039421	-	93	76.647	Pan_paniscus
ENSCPBG00000026060	-	94	92.814	ENSPPAG00000028984	BCL2L2-PABPN1	92	92.258	Pan_paniscus
ENSCPBG00000026060	-	94	92.814	ENSPPRG00000010567	PABPN1	55	92.814	Panthera_pardus
ENSCPBG00000026060	-	94	92.814	ENSPTIG00000001063	BCL2L2-PABPN1	94	92.814	Panthera_tigris_altaica
ENSCPBG00000026060	-	94	73.653	ENSPTRG00000047273	-	61	73.653	Pan_troglodytes
ENSCPBG00000026060	-	94	92.814	ENSPTRG00000006167	BCL2L2	62	92.814	Pan_troglodytes
ENSCPBG00000026060	-	94	92.814	ENSPANG00000021100	BCL2L2-PABPN1	62	92.814	Papio_anubis
ENSCPBG00000026060	-	94	79.167	ENSPANG00000023326	-	99	85.816	Papio_anubis
ENSCPBG00000026060	-	94	85.714	ENSPKIG00000008144	-	55	84.848	Paramormyrops_kingsleyae
ENSCPBG00000026060	-	94	83.333	ENSPKIG00000018052	pabpn1	71	83.333	Paramormyrops_kingsleyae
ENSCPBG00000026060	-	80	71.329	ENSPKIG00000008340	pabpn1l	77	60.479	Paramormyrops_kingsleyae
ENSCPBG00000026060	-	66	92.308	ENSPSIG00000011959	-	86	92.308	Pelodiscus_sinensis
ENSCPBG00000026060	-	87	83.974	ENSPMGG00000022027	pabpn1	56	83.974	Periophthalmus_magnuspinnatus
ENSCPBG00000026060	-	94	93.413	ENSPEMG00000008332	Gm20521	82	98.529	Peromyscus_maniculatus_bairdii
ENSCPBG00000026060	-	73	86.923	ENSPMAG00000006212	pabpn1	72	75.862	Petromyzon_marinus
ENSCPBG00000026060	-	94	92.216	ENSPCIG00000027751	-	55	92.216	Phascolarctos_cinereus
ENSCPBG00000026060	-	94	80.473	ENSPFOG00000010351	pabpn1	71	83.432	Poecilia_formosa
ENSCPBG00000026060	-	87	83.439	ENSPLAG00000022696	pabpn1	56	82.530	Poecilia_latipinna
ENSCPBG00000026060	-	94	80.473	ENSPMEG00000020856	pabpn1	71	83.432	Poecilia_mexicana
ENSCPBG00000026060	-	94	80.473	ENSPREG00000011278	pabpn1	71	83.432	Poecilia_reticulata
ENSCPBG00000026060	-	87	92.258	ENSPPYG00000005663	PABPN1	55	92.258	Pongo_abelii
ENSCPBG00000026060	-	87	73.077	ENSPCAG00000005902	PABPN1	53	73.077	Procavia_capensis
ENSCPBG00000026060	-	94	92.814	ENSPCOG00000028047	BCL2L2-PABPN1	62	92.814	Propithecus_coquereli
ENSCPBG00000026060	-	94	91.018	ENSPVAG00000005270	PABPN1	55	91.018	Pteropus_vampyrus
ENSCPBG00000026060	-	94	83.929	ENSPNYG00000013182	pabpn1	71	83.929	Pundamilia_nyererei
ENSCPBG00000026060	-	100	61.453	ENSPNAG00000021666	pabpn1l	68	70.068	Pygocentrus_nattereri
ENSCPBG00000026060	-	94	84.524	ENSPNAG00000023526	pabpn1	71	84.524	Pygocentrus_nattereri
ENSCPBG00000026060	-	94	93.413	ENSRNOG00000042195	Pabpn1	55	93.413	Rattus_norvegicus
ENSCPBG00000026060	-	94	77.246	ENSRBIG00000042811	-	68	77.246	Rhinopithecus_bieti
ENSCPBG00000026060	-	94	81.437	ENSRBIG00000039547	-	60	78.443	Rhinopithecus_bieti
ENSCPBG00000026060	-	94	82.036	ENSRROG00000040409	-	60	79.042	Rhinopithecus_roxellana
ENSCPBG00000026060	-	94	92.814	ENSRROG00000045535	BCL2L2-PABPN1	94	92.814	Rhinopithecus_roxellana
ENSCPBG00000026060	-	94	86.111	ENSSBOG00000026930	BCL2L2-PABPN1	92	92.258	Saimiri_boliviensis_boliviensis
ENSCPBG00000026060	-	100	72.472	ENSSHAG00000007707	-	71	71.856	Sarcophilus_harrisii
ENSCPBG00000026060	-	94	92.216	ENSSHAG00000014841	-	77	92.216	Sarcophilus_harrisii
ENSCPBG00000026060	-	94	84.524	ENSSFOG00015012565	pabpn1	74	84.524	Scleropages_formosus
ENSCPBG00000026060	-	98	63.218	ENSSFOG00015015833	pabpn1l	72	63.804	Scleropages_formosus
ENSCPBG00000026060	-	94	83.929	ENSSFOG00015014718	pabpn1	71	83.929	Scleropages_formosus
ENSCPBG00000026060	-	94	84.524	ENSSMAG00000020157	pabpn1	71	84.524	Scophthalmus_maximus
ENSCPBG00000026060	-	87	84.615	ENSSDUG00000020582	pabpn1	55	83.636	Seriola_dumerili
ENSCPBG00000026060	-	94	84.524	ENSSLDG00000007118	pabpn1	71	84.524	Seriola_lalandi_dorsalis
ENSCPBG00000026060	-	100	96.629	ENSSPUG00000018308	-	100	96.629	Sphenodon_punctatus
ENSCPBG00000026060	-	94	84.524	ENSSPAG00000021658	pabpn1	71	84.524	Stegastes_partitus
ENSCPBG00000026060	-	99	52.841	ENSSSCG00000038472	-	91	52.096	Sus_scrofa
ENSCPBG00000026060	-	99	70.621	ENSSSCG00000034805	-	62	68.902	Sus_scrofa
ENSCPBG00000026060	-	94	92.814	ENSSSCG00000002023	PABPN1	55	92.814	Sus_scrofa
ENSCPBG00000026060	-	94	85.714	ENSTRUG00000023664	pabpn1	71	85.714	Takifugu_rubripes
ENSCPBG00000026060	-	94	81.065	ENSTNIG00000005369	pabpn1	77	81.065	Tetraodon_nigroviridis
ENSCPBG00000026060	-	94	92.814	ENSUAMG00000024460	PABPN1	55	92.814	Ursus_americanus
ENSCPBG00000026060	-	94	92.814	ENSUMAG00000014288	BCL2L2-PABPN1	50	92.814	Ursus_maritimus
ENSCPBG00000026060	-	94	92.814	ENSVVUG00000019912	BCL2L2-PABPN1	66	92.814	Vulpes_vulpes
ENSCPBG00000026060	-	94	88.623	ENSXETG00000014597	pabpn1	56	90.419	Xenopus_tropicalis
ENSCPBG00000026060	-	97	72.000	ENSXCOG00000005158	pabpn1	89	84.868	Xiphophorus_couchianus
ENSCPBG00000026060	-	94	81.065	ENSXMAG00000006196	pabpn1	71	84.024	Xiphophorus_maculatus