EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026092 (Gene tree)
Gene ID: 101936815
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 84236 bases
Position: chrKK088187.1:5297200-5381435
Accession: 5276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037672	RRM_1	PF00076.22	1.4e-17	1	2
ENSCPBP00000037672	RRM_1	PF00076.22	1.4e-17	2	2
ENSCPBP00000037673	RRM_1	PF00076.22	2e-17	1	2
ENSCPBP00000037673	RRM_1	PF00076.22	2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044173	HTATSF1-201	1824	-	ENSCPBP00000037672	410 (aa)	-	-
ENSCPBT00000044174	HTATSF1-202	2034	-	ENSCPBP00000037673	450 (aa)	XP_008177223	UPI0003891723

Gene Model

Click here to download ENSCPBG00000026092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026092	HTATSF1	89	67.554	ENSG00000102241	HTATSF1	99	69.600	Homo_sapiens
ENSCPBG00000026092	HTATSF1	98	61.623	ENSAPOG00000009823	htatsf1	99	61.641	Acanthochromis_polyacanthus
ENSCPBG00000026092	HTATSF1	99	62.121	ENSACIG00000020459	htatsf1	99	62.174	Amphilophus_citrinellus
ENSCPBG00000026092	HTATSF1	98	61.087	ENSAOCG00000020994	htatsf1	99	61.522	Amphiprion_ocellaris
ENSCPBG00000026092	HTATSF1	98	62.144	ENSAPEG00000016432	htatsf1	99	61.304	Amphiprion_percula
ENSCPBG00000026092	HTATSF1	87	66.253	ENSATEG00000008903	htatsf1	85	68.586	Anabas_testudineus
ENSCPBG00000026092	HTATSF1	97	82.294	ENSAPLG00000012401	HTATSF1	100	82.082	Anas_platyrhynchos
ENSCPBG00000026092	HTATSF1	93	74.219	ENSACAG00000009346	HTATSF1	98	74.046	Anolis_carolinensis
ENSCPBG00000026092	HTATSF1	98	62.256	ENSACLG00000008096	htatsf1	99	62.256	Astatotilapia_calliptera
ENSCPBG00000026092	HTATSF1	99	61.834	ENSAMXG00000008387	htatsf1	99	62.473	Astyanax_mexicanus
ENSCPBG00000026092	HTATSF1	89	67.120	ENSBTAG00000032711	HTATSF1	51	67.273	Bos_taurus
ENSCPBG00000026092	HTATSF1	75	38.019	WBGene00022025	Y65B4A.1	71	38.558	Caenorhabditis_elegans
ENSCPBG00000026092	HTATSF1	87	70.000	ENSCAFG00000023294	HTATSF1	50	70.725	Canis_familiaris
ENSCPBG00000026092	HTATSF1	89	69.293	ENSCHIG00000000312	HTATSF1	50	70.130	Capra_hircus
ENSCPBG00000026092	HTATSF1	87	70.000	ENSTSYG00000028876	HTATSF1	50	70.390	Carlito_syrichta
ENSCPBG00000026092	HTATSF1	81	74.018	ENSCCAG00000025329	-	55	70.157	Cebus_capucinus
ENSCPBG00000026092	HTATSF1	89	66.990	ENSCATG00000029963	HTATSF1	50	70.649	Cercocebus_atys
ENSCPBG00000026092	HTATSF1	89	66.990	ENSCSAG00000007505	HTATSF1	50	70.649	Chlorocebus_sabaeus
ENSCPBG00000026092	HTATSF1	87	45.220	ENSCING00000005914	-	83	47.107	Ciona_intestinalis
ENSCPBG00000026092	HTATSF1	79	45.787	ENSCSAVG00000000371	-	74	45.506	Ciona_savignyi
ENSCPBG00000026092	HTATSF1	89	67.233	ENSCANG00000028495	HTATSF1	50	70.909	Colobus_angolensis_palliatus
ENSCPBG00000026092	HTATSF1	98	62.637	ENSCVAG00000014070	htatsf1	98	62.500	Cyprinodon_variegatus
ENSCPBG00000026092	HTATSF1	98	62.138	ENSDARG00000056649	htatsf1	99	62.138	Danio_rerio
ENSCPBG00000026092	HTATSF1	86	43.989	FBgn0037081	barc	64	45.251	Drosophila_melanogaster
ENSCPBG00000026092	HTATSF1	93	52.736	ENSEBUG00000001534	htatsf1	80	55.138	Eptatretus_burgeri
ENSCPBG00000026092	HTATSF1	99	58.710	ENSELUG00000005486	htatsf1	92	59.871	Esox_lucius
ENSCPBG00000026092	HTATSF1	87	69.444	ENSFCAG00000031924	HTATSF1	50	69.689	Felis_catus
ENSCPBG00000026092	HTATSF1	99	79.823	ENSFALG00000003728	HTATSF1	99	79.823	Ficedula_albicollis
ENSCPBG00000026092	HTATSF1	85	70.857	ENSFDAG00000008617	HTATSF1	50	68.229	Fukomys_damarensis
ENSCPBG00000026092	HTATSF1	99	63.043	ENSFHEG00000020286	htatsf1	99	62.391	Fundulus_heteroclitus
ENSCPBG00000026092	HTATSF1	78	68.258	ENSGMOG00000016444	htatsf1	99	68.258	Gadus_morhua
ENSCPBG00000026092	HTATSF1	99	80.357	ENSGALG00000006410	HTATSF1	99	80.357	Gallus_gallus
ENSCPBG00000026092	HTATSF1	98	61.184	ENSGAFG00000003041	htatsf1	97	61.269	Gambusia_affinis
ENSCPBG00000026092	HTATSF1	98	61.087	ENSGACG00000020459	htatsf1	99	60.486	Gasterosteus_aculeatus
ENSCPBG00000026092	HTATSF1	89	67.554	ENSGGOG00000026072	HTATSF1	50	71.244	Gorilla_gorilla
ENSCPBG00000026092	HTATSF1	98	62.309	ENSHBUG00000004392	htatsf1	99	62.309	Haplochromis_burtoni
ENSCPBG00000026092	HTATSF1	84	72.674	ENSHGLG00000005328	HTATSF1	50	69.531	Heterocephalus_glaber_female
ENSCPBG00000026092	HTATSF1	99	60.394	ENSHCOG00000009056	htatsf1	100	60.832	Hippocampus_comes
ENSCPBG00000026092	HTATSF1	99	59.698	ENSIPUG00000017828	htatsf1	99	59.698	Ictalurus_punctatus
ENSCPBG00000026092	HTATSF1	86	69.832	ENSSTOG00000012505	HTATSF1	52	70.130	Ictidomys_tridecemlineatus
ENSCPBG00000026092	HTATSF1	98	61.422	ENSKMAG00000007622	htatsf1	99	61.404	Kryptolebias_marmoratus
ENSCPBG00000026092	HTATSF1	98	61.404	ENSLBEG00000001154	htatsf1	99	61.810	Labrus_bergylta
ENSCPBG00000026092	HTATSF1	100	66.740	ENSLACG00000015989	HTATSF1	99	66.374	Latimeria_chalumnae
ENSCPBG00000026092	HTATSF1	98	44.805	ENSLOCG00000015118	htatsf1	99	43.856	Lepisosteus_oculatus
ENSCPBG00000026092	HTATSF1	88	68.227	ENSLAFG00000014307	HTATSF1	56	69.923	Loxodonta_africana
ENSCPBG00000026092	HTATSF1	89	66.505	ENSMFAG00000044705	HTATSF1	50	70.130	Macaca_fascicularis
ENSCPBG00000026092	HTATSF1	89	66.990	ENSMMUG00000006450	HTATSF1	50	70.649	Macaca_mulatta
ENSCPBG00000026092	HTATSF1	86	70.670	ENSMNEG00000024084	HTATSF1	55	70.649	Macaca_nemestrina
ENSCPBG00000026092	HTATSF1	89	66.990	ENSMLEG00000035511	HTATSF1	50	70.649	Mandrillus_leucophaeus
ENSCPBG00000026092	HTATSF1	90	64.988	ENSMAMG00000021225	htatsf1	100	61.688	Mastacembelus_armatus
ENSCPBG00000026092	HTATSF1	98	62.256	ENSMZEG00005000485	htatsf1	99	62.256	Maylandia_zebra
ENSCPBG00000026092	HTATSF1	97	80.549	ENSMGAG00000003558	HTATSF1	99	80.796	Meleagris_gallopavo
ENSCPBG00000026092	HTATSF1	88	67.322	ENSMAUG00000007235	Htatsf1	51	70.026	Mesocricetus_auratus
ENSCPBG00000026092	HTATSF1	75	74.026	ENSMICG00000009348	HTATSF1	50	70.370	Microcebus_murinus
ENSCPBG00000026092	HTATSF1	88	68.672	ENSMOCG00000022370	-	50	69.588	Microtus_ochrogaster
ENSCPBG00000026092	HTATSF1	80	71.271	ENSMOCG00000023007	-	50	70.543	Microtus_ochrogaster
ENSCPBG00000026092	HTATSF1	99	60.699	ENSMMOG00000011013	htatsf1	99	60.613	Mola_mola
ENSCPBG00000026092	HTATSF1	53	75.304	ENSMODG00000000199	-	98	75.304	Monodelphis_domestica
ENSCPBG00000026092	HTATSF1	99	70.946	ENSMODG00000014087	-	97	70.946	Monodelphis_domestica
ENSCPBG00000026092	HTATSF1	98	60.793	ENSMALG00000019977	htatsf1	99	60.793	Monopterus_albus
ENSCPBG00000026092	HTATSF1	91	66.268	MGP_CAROLIEiJ_G0033094	Htatsf1	51	69.948	Mus_caroli
ENSCPBG00000026092	HTATSF1	91	66.268	ENSMUSG00000067873	Htatsf1	50	70.207	Mus_musculus
ENSCPBG00000026092	HTATSF1	91	66.507	MGP_SPRETEiJ_G0034249	Htatsf1	50	70.466	Mus_spretus
ENSCPBG00000026092	HTATSF1	90	68.633	ENSMLUG00000009234	-	52	68.947	Myotis_lucifugus
ENSCPBG00000026092	HTATSF1	91	66.986	ENSNGAG00000017831	Htatsf1	52	70.619	Nannospalax_galili
ENSCPBG00000026092	HTATSF1	98	61.752	ENSNBRG00000003818	htatsf1	99	61.822	Neolamprologus_brichardi
ENSCPBG00000026092	HTATSF1	90	69.892	ENSNLEG00000002746	HTATSF1	50	71.503	Nomascus_leucogenys
ENSCPBG00000026092	HTATSF1	87	76.709	ENSMEUG00000004133	-	91	77.807	Notamacropus_eugenii
ENSCPBG00000026092	HTATSF1	98	62.527	ENSONIG00000008638	htatsf1	99	62.527	Oreochromis_niloticus
ENSCPBG00000026092	HTATSF1	97	77.582	ENSOANG00000011674	-	99	77.751	Ornithorhynchus_anatinus
ENSCPBG00000026092	HTATSF1	98	62.914	ENSORLG00000002356	htatsf1	98	62.914	Oryzias_latipes
ENSCPBG00000026092	HTATSF1	98	62.857	ENSORLG00020017818	htatsf1	95	62.857	Oryzias_latipes_hni
ENSCPBG00000026092	HTATSF1	98	62.555	ENSORLG00015002268	htatsf1	98	62.555	Oryzias_latipes_hsok
ENSCPBG00000026092	HTATSF1	98	62.611	ENSOMEG00000007564	htatsf1	98	62.611	Oryzias_melastigma
ENSCPBG00000026092	HTATSF1	89	67.554	ENSPPAG00000024268	HTATSF1	50	71.244	Pan_paniscus
ENSCPBG00000026092	HTATSF1	87	69.722	ENSPPRG00000014209	HTATSF1	50	69.948	Panthera_pardus
ENSCPBG00000026092	HTATSF1	89	67.554	ENSPTRG00000044591	HTATSF1	50	71.244	Pan_troglodytes
ENSCPBG00000026092	HTATSF1	98	61.659	ENSPKIG00000024852	htatsf1	99	61.659	Paramormyrops_kingsleyae
ENSCPBG00000026092	HTATSF1	86	94.872	ENSPSIG00000010192	HTATSF1	99	94.872	Pelodiscus_sinensis
ENSCPBG00000026092	HTATSF1	98	61.572	ENSPMGG00000006172	htatsf1	99	61.438	Periophthalmus_magnuspinnatus
ENSCPBG00000026092	HTATSF1	85	70.130	ENSPEMG00000022397	Htatsf1	50	70.130	Peromyscus_maniculatus_bairdii
ENSCPBG00000026092	HTATSF1	98	68.707	ENSPCIG00000018896	-	98	68.707	Phascolarctos_cinereus
ENSCPBG00000026092	HTATSF1	90	75.303	ENSPCIG00000030173	-	94	75.303	Phascolarctos_cinereus
ENSCPBG00000026092	HTATSF1	98	61.623	ENSPFOG00000007871	htatsf1	96	61.707	Poecilia_formosa
ENSCPBG00000026092	HTATSF1	98	62.144	ENSPLAG00000007532	htatsf1	99	61.707	Poecilia_latipinna
ENSCPBG00000026092	HTATSF1	98	61.842	ENSPMEG00000000352	htatsf1	99	61.926	Poecilia_mexicana
ENSCPBG00000026092	HTATSF1	98	62.281	ENSPREG00000007811	htatsf1	99	62.363	Poecilia_reticulata
ENSCPBG00000026092	HTATSF1	92	66.276	ENSPPYG00000020765	HTATSF1	50	71.244	Pongo_abelii
ENSCPBG00000026092	HTATSF1	94	55.044	ENSPCAG00000010576	HTATSF1	52	62.797	Procavia_capensis
ENSCPBG00000026092	HTATSF1	86	70.112	ENSPVAG00000010281	HTATSF1	54	69.737	Pteropus_vampyrus
ENSCPBG00000026092	HTATSF1	98	62.256	ENSPNYG00000016693	htatsf1	99	62.256	Pundamilia_nyererei
ENSCPBG00000026092	HTATSF1	99	61.745	ENSPNAG00000006166	htatsf1	99	61.830	Pygocentrus_nattereri
ENSCPBG00000026092	HTATSF1	89	66.990	ENSRROG00000021939	HTATSF1	50	70.649	Rhinopithecus_roxellana
ENSCPBG00000026092	HTATSF1	52	32.895	YNL286W	-	76	32.456	Saccharomyces_cerevisiae
ENSCPBG00000026092	HTATSF1	84	73.043	ENSSBOG00000017914	-	50	72.074	Saimiri_boliviensis_boliviensis
ENSCPBG00000026092	HTATSF1	85	74.545	ENSSHAG00000006440	-	99	74.545	Sarcophilus_harrisii
ENSCPBG00000026092	HTATSF1	96	72.980	ENSSHAG00000018908	-	97	71.973	Sarcophilus_harrisii
ENSCPBG00000026092	HTATSF1	98	61.538	ENSSFOG00015012002	htatsf1	99	61.064	Scleropages_formosus
ENSCPBG00000026092	HTATSF1	98	62.500	ENSSMAG00000002970	htatsf1	99	62.500	Scophthalmus_maximus
ENSCPBG00000026092	HTATSF1	98	59.649	ENSSDUG00000020002	htatsf1	87	67.120	Seriola_dumerili
ENSCPBG00000026092	HTATSF1	98	61.184	ENSSLDG00000016880	htatsf1	99	61.404	Seriola_lalandi_dorsalis
ENSCPBG00000026092	HTATSF1	86	66.938	ENSSARG00000005193	HTATSF1	51	68.351	Sorex_araneus
ENSCPBG00000026092	HTATSF1	99	78.667	ENSSPUG00000014767	HTATSF1	99	79.111	Sphenodon_punctatus
ENSCPBG00000026092	HTATSF1	98	59.149	ENSSPAG00000000732	htatsf1	99	59.649	Stegastes_partitus
ENSCPBG00000026092	HTATSF1	84	70.757	ENSSSCG00000023062	HTATSF1	55	70.757	Sus_scrofa
ENSCPBG00000026092	HTATSF1	98	80.149	ENSTGUG00000002099	HTATSF1	99	80.089	Taeniopygia_guttata
ENSCPBG00000026092	HTATSF1	98	60.879	ENSTRUG00000013383	htatsf1	99	60.879	Takifugu_rubripes
ENSCPBG00000026092	HTATSF1	98	62.198	ENSTNIG00000016140	htatsf1	98	62.198	Tetraodon_nigroviridis
ENSCPBG00000026092	HTATSF1	96	62.745	ENSTTRG00000002269	HTATSF1	58	71.965	Tursiops_truncatus
ENSCPBG00000026092	HTATSF1	93	65.734	ENSUAMG00000012048	HTATSF1	50	70.649	Ursus_americanus
ENSCPBG00000026092	HTATSF1	98	64.509	ENSXETG00000019749	htatsf1	84	64.430	Xenopus_tropicalis
ENSCPBG00000026092	HTATSF1	98	58.125	ENSXCOG00000006912	htatsf1	88	69.713	Xiphophorus_couchianus
ENSCPBG00000026092	HTATSF1	98	63.229	ENSXMAG00000000490	htatsf1	99	63.311	Xiphophorus_maculatus