EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026096 (Gene tree)
Gene ID: 101945445
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 6956 bases
Position: chrKK083131.1:1228521-1235476
Accession: 20155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037678	RRM_1	PF00076.22	5.8e-33	1	2
ENSCPBP00000037678	RRM_1	PF00076.22	5.8e-33	2	2
ENSCPBP00000037680	RRM_1	PF00076.22	8e-33	1	2
ENSCPBP00000037680	RRM_1	PF00076.22	8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044179	RBM23-201	2103	-	ENSCPBP00000037678	402 (aa)	-	-
ENSCPBT00000044181	RBM23-202	1771	XM_005290140	ENSCPBP00000037680	441 (aa)	XP_005290197	UPI000388B079

Gene Model

Click here to download ENSCPBG00000026096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026096	RBM23	94	55.204	ENSCPBG00000011600	RBM39	58	66.118
ENSCPBG00000026096	RBM23	50	40.278	ENSCPBG00000005782	PABPC1	55	40.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026096	RBM23	96	70.071	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCPBG00000026096	RBM23	75	80.128	ENSAMEG00000007322	RBM23	69	78.846	Ailuropoda_melanoleuca
ENSCPBG00000026096	RBM23	77	88.889	ENSACAG00000001569	RBM23	99	75.974	Anolis_carolinensis
ENSCPBG00000026096	RBM23	96	55.349	ENSANAG00000033790	-	72	64.401	Aotus_nancymaae
ENSCPBG00000026096	RBM23	96	67.387	ENSBTAG00000038333	RBM23	69	78.997	Bos_taurus
ENSCPBG00000026096	RBM23	96	68.090	ENSCJAG00000008482	RBM23	100	65.541	Callithrix_jacchus
ENSCPBG00000026096	RBM23	77	75.786	ENSCAFG00000011217	RBM23	100	62.759	Canis_familiaris
ENSCPBG00000026096	RBM23	77	80.757	ENSCAFG00020007711	RBM23	100	66.071	Canis_lupus_dingo
ENSCPBG00000026096	RBM23	96	66.955	ENSCHIG00000025709	RBM23	69	78.997	Capra_hircus
ENSCPBG00000026096	RBM23	96	71.694	ENSTSYG00000014755	RBM23	100	80.515	Carlito_syrichta
ENSCPBG00000026096	RBM23	96	61.916	ENSCCAG00000028584	-	98	70.229	Cebus_capucinus
ENSCPBG00000026096	RBM23	96	69.284	ENSCCAG00000025114	-	78	74.922	Cebus_capucinus
ENSCPBG00000026096	RBM23	96	71.132	ENSCATG00000017832	RBM23	100	77.857	Cercocebus_atys
ENSCPBG00000026096	RBM23	96	67.888	ENSCSAG00000016213	RBM23	71	78.549	Chlorocebus_sabaeus
ENSCPBG00000026096	RBM23	82	79.706	ENSCANG00000001893	RBM23	77	79.114	Colobus_angolensis_palliatus
ENSCPBG00000026096	RBM23	96	70.120	ENSDNOG00000032457	RBM23	100	68.421	Dasypus_novemcinctus
ENSCPBG00000026096	RBM23	66	80.292	ENSDORG00000004926	-	100	78.832	Dipodomys_ordii
ENSCPBG00000026096	RBM23	67	54.882	ENSETEG00000017915	-	74	73.077	Echinops_telfairi
ENSCPBG00000026096	RBM23	77	81.329	ENSEASG00005011696	RBM23	69	79.936	Equus_asinus_asinus
ENSCPBG00000026096	RBM23	96	66.125	ENSECAG00000009910	RBM23	100	65.820	Equus_caballus
ENSCPBG00000026096	RBM23	96	69.866	ENSEEUG00000015560	RBM23	71	79.365	Erinaceus_europaeus
ENSCPBG00000026096	RBM23	77	80.757	ENSFCAG00000006632	RBM23	100	70.112	Felis_catus
ENSCPBG00000026096	RBM23	96	70.429	ENSGGOG00000015707	RBM23	100	68.552	Gorilla_gorilla
ENSCPBG00000026096	RBM23	96	64.254	ENSHGLG00100006114	RBM23	70	75.161	Heterocephalus_glaber_male
ENSCPBG00000026096	RBM23	66	80.586	ENSSTOG00000010354	RBM23	100	79.121	Ictidomys_tridecemlineatus
ENSCPBG00000026096	RBM23	96	70.588	ENSLAFG00000018567	RBM23	100	66.890	Loxodonta_africana
ENSCPBG00000026096	RBM23	96	70.089	ENSMFAG00000037595	RBM23	73	78.864	Macaca_fascicularis
ENSCPBG00000026096	RBM23	96	69.866	ENSMMUG00000018381	RBM23	73	78.864	Macaca_mulatta
ENSCPBG00000026096	RBM23	96	70.562	ENSMNEG00000042442	RBM23	73	79.618	Macaca_nemestrina
ENSCPBG00000026096	RBM23	96	67.111	ENSMLEG00000039954	RBM23	73	74.922	Mandrillus_leucophaeus
ENSCPBG00000026096	RBM23	96	73.598	ENSMICG00000006364	RBM23	100	81.413	Microcebus_murinus
ENSCPBG00000026096	RBM23	76	84.516	ENSMODG00000024448	RBM23	100	71.973	Monodelphis_domestica
ENSCPBG00000026096	RBM23	77	81.132	ENSMPUG00000007151	RBM23	100	70.045	Mustela_putorius_furo
ENSCPBG00000026096	RBM23	96	65.991	ENSMLUG00000012923	RBM23	100	65.376	Myotis_lucifugus
ENSCPBG00000026096	RBM23	96	70.312	ENSNLEG00000014792	RBM23	100	68.009	Nomascus_leucogenys
ENSCPBG00000026096	RBM23	78	77.429	ENSOPRG00000001092	RBM23	100	63.820	Ochotona_princeps
ENSCPBG00000026096	RBM23	77	79.618	ENSOCUG00000002006	RBM23	100	66.517	Oryctolagus_cuniculus
ENSCPBG00000026096	RBM23	95	68.707	ENSOGAG00000014794	RBM23	99	66.438	Otolemur_garnettii
ENSCPBG00000026096	RBM23	96	66.739	ENSOARG00000019398	RBM23	69	78.683	Ovis_aries
ENSCPBG00000026096	RBM23	96	70.188	ENSPPAG00000037922	RBM23	100	67.338	Pan_paniscus
ENSCPBG00000026096	RBM23	77	80.757	ENSPPRG00000023344	RBM23	100	70.112	Panthera_pardus
ENSCPBG00000026096	RBM23	77	80.757	ENSPTIG00000007831	RBM23	100	69.161	Panthera_tigris_altaica
ENSCPBG00000026096	RBM23	96	69.643	ENSPTRG00000006151	RBM23	100	67.562	Pan_troglodytes
ENSCPBG00000026096	RBM23	82	78.655	ENSPANG00000001324	RBM23	100	79.422	Papio_anubis
ENSCPBG00000026096	RBM23	76	84.516	ENSPCIG00000027773	RBM23	69	83.226	Phascolarctos_cinereus
ENSCPBG00000026096	RBM23	78	80.062	ENSPPYG00000005649	RBM23	73	78.730	Pongo_abelii
ENSCPBG00000026096	RBM23	96	57.175	ENSPCAG00000006669	RBM23	73	64.610	Procavia_capensis
ENSCPBG00000026096	RBM23	96	73.318	ENSPCOG00000018564	RBM23	100	80.882	Propithecus_coquereli
ENSCPBG00000026096	RBM23	96	72.184	ENSPVAG00000013785	RBM23	100	69.885	Pteropus_vampyrus
ENSCPBG00000026096	RBM23	96	70.312	ENSRBIG00000039276	RBM23	73	79.180	Rhinopithecus_bieti
ENSCPBG00000026096	RBM23	96	70.312	ENSRROG00000044026	RBM23	73	79.180	Rhinopithecus_roxellana
ENSCPBG00000026096	RBM23	84	85.849	ENSSBOG00000023037	-	100	70.455	Saimiri_boliviensis_boliviensis
ENSCPBG00000026096	RBM23	92	58.191	ENSSBOG00000034977	-	72	65.517	Saimiri_boliviensis_boliviensis
ENSCPBG00000026096	RBM23	76	84.516	ENSSHAG00000012932	RBM23	68	83.226	Sarcophilus_harrisii
ENSCPBG00000026096	RBM23	77	80.251	ENSSARG00000005165	RBM23	100	68.834	Sorex_araneus
ENSCPBG00000026096	RBM23	77	85.759	ENSSPUG00000000489	RBM23	100	77.778	Sphenodon_punctatus
ENSCPBG00000026096	RBM23	96	70.112	ENSSSCG00000026700	RBM23	100	69.697	Sus_scrofa
ENSCPBG00000026096	RBM23	96	66.225	ENSTBEG00000011543	RBM23	69	74.062	Tupaia_belangeri
ENSCPBG00000026096	RBM23	96	67.177	ENSTTRG00000001500	RBM23	70	80.645	Tursiops_truncatus
ENSCPBG00000026096	RBM23	77	80.757	ENSUAMG00000008524	RBM23	100	69.507	Ursus_americanus
ENSCPBG00000026096	RBM23	77	80.757	ENSUMAG00000014075	RBM23	100	69.507	Ursus_maritimus
ENSCPBG00000026096	RBM23	77	80.757	ENSVVUG00000019815	RBM23	100	66.071	Vulpes_vulpes
ENSCPBG00000026096	RBM23	73	73.154	ENSXETG00000022623	rbm23	71	71.521	Xenopus_tropicalis