EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026195 (Gene tree)
Gene ID: 101949882
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 24558 bases
Position: chr4:44152885-44177442
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000037810	SRP54	PF00448.22	1.2e-77	1	1
ENSCPBP00000037810	SRP54_N	PF02881.19	2.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044346	SRP54-201	1995	-	ENSCPBP00000037810	504 (aa)	XP_005285401	UPI0003890341

Gene Model

Click here to download ENSCPBG00000026195's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026195	SRP54	100	99.206	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSCPBG00000026195	SRP54	100	95.833	ENSAPOG00000011314	srp54	100	95.833	Acanthochromis_polyacanthus
ENSCPBG00000026195	SRP54	100	99.206	ENSAMEG00000015544	SRP54	100	99.206	Ailuropoda_melanoleuca
ENSCPBG00000026195	SRP54	89	94.209	ENSACIG00000022831	srp54	97	94.209	Amphilophus_citrinellus
ENSCPBG00000026195	SRP54	100	95.833	ENSAOCG00000019401	srp54	100	95.833	Amphiprion_ocellaris
ENSCPBG00000026195	SRP54	100	95.833	ENSAPEG00000001977	srp54	100	95.833	Amphiprion_percula
ENSCPBG00000026195	SRP54	100	96.230	ENSATEG00000013877	srp54	100	96.230	Anabas_testudineus
ENSCPBG00000026195	SRP54	94	99.578	ENSAPLG00000010125	SRP54	95	99.578	Anas_platyrhynchos
ENSCPBG00000026195	SRP54	100	99.405	ENSACAG00000002103	-	100	99.405	Anolis_carolinensis
ENSCPBG00000026195	SRP54	86	96.544	ENSACAG00000010631	-	100	96.544	Anolis_carolinensis
ENSCPBG00000026195	SRP54	65	82.477	ENSACAG00000001124	-	100	82.477	Anolis_carolinensis
ENSCPBG00000026195	SRP54	100	99.206	ENSANAG00000022133	SRP54	100	99.206	Aotus_nancymaae
ENSCPBG00000026195	SRP54	100	96.032	ENSACLG00000015866	srp54	100	96.032	Astatotilapia_calliptera
ENSCPBG00000026195	SRP54	100	96.032	ENSAMXG00000032669	SRP54	100	96.032	Astyanax_mexicanus
ENSCPBG00000026195	SRP54	100	99.206	ENSBTAG00000019085	SRP54	100	99.206	Bos_taurus
ENSCPBG00000026195	SRP54	98	71.687	WBGene00009012	F21D5.7	100	71.687	Caenorhabditis_elegans
ENSCPBG00000026195	SRP54	100	99.206	ENSCJAG00000006581	SRP54	100	99.206	Callithrix_jacchus
ENSCPBG00000026195	SRP54	100	99.206	ENSCAFG00000013331	SRP54	100	99.206	Canis_familiaris
ENSCPBG00000026195	SRP54	100	99.206	ENSCAFG00020023427	SRP54	100	99.206	Canis_lupus_dingo
ENSCPBG00000026195	SRP54	100	99.206	ENSCHIG00000026345	SRP54	100	99.206	Capra_hircus
ENSCPBG00000026195	SRP54	100	99.008	ENSTSYG00000002680	-	100	99.008	Carlito_syrichta
ENSCPBG00000026195	SRP54	94	87.789	ENSTSYG00000035333	-	93	87.789	Carlito_syrichta
ENSCPBG00000026195	SRP54	94	63.673	ENSCAPG00000008780	SRP54	100	63.673	Cavia_aperea
ENSCPBG00000026195	SRP54	100	98.810	ENSCPOG00000003691	SRP54	100	98.810	Cavia_porcellus
ENSCPBG00000026195	SRP54	90	98.810	ENSCCAG00000024179	SRP54	100	99.045	Cebus_capucinus
ENSCPBG00000026195	SRP54	100	99.206	ENSCATG00000034083	SRP54	100	99.206	Cercocebus_atys
ENSCPBG00000026195	SRP54	100	99.206	ENSCLAG00000015076	SRP54	100	99.206	Chinchilla_lanigera
ENSCPBG00000026195	SRP54	100	99.206	ENSCSAG00000015575	SRP54	100	99.206	Chlorocebus_sabaeus
ENSCPBG00000026195	SRP54	95	87.110	ENSCHOG00000008986	SRP54	100	87.110	Choloepus_hoffmanni
ENSCPBG00000026195	SRP54	100	81.746	ENSCING00000007380	-	100	81.746	Ciona_intestinalis
ENSCPBG00000026195	SRP54	100	99.206	ENSCANG00000028532	SRP54	100	99.206	Colobus_angolensis_palliatus
ENSCPBG00000026195	SRP54	100	98.810	ENSCGRG00001009525	-	100	98.810	Cricetulus_griseus_chok1gshd
ENSCPBG00000026195	SRP54	76	98.961	ENSCGRG00000009453	-	89	98.961	Cricetulus_griseus_crigri
ENSCPBG00000026195	SRP54	100	95.040	ENSCSEG00000012392	srp54	100	95.040	Cynoglossus_semilaevis
ENSCPBG00000026195	SRP54	100	95.833	ENSCVAG00000010395	srp54	100	95.833	Cyprinodon_variegatus
ENSCPBG00000026195	SRP54	100	96.032	ENSDARG00000098367	srp54	100	96.032	Danio_rerio
ENSCPBG00000026195	SRP54	100	99.206	ENSDNOG00000032525	SRP54	100	99.206	Dasypus_novemcinctus
ENSCPBG00000026195	SRP54	89	84.292	ENSDORG00000005159	-	98	84.292	Dipodomys_ordii
ENSCPBG00000026195	SRP54	96	77.526	FBgn0010747	Srp54k	98	77.108	Drosophila_melanogaster
ENSCPBG00000026195	SRP54	83	57.416	ENSETEG00000012102	-	99	57.416	Echinops_telfairi
ENSCPBG00000026195	SRP54	100	98.016	ENSETEG00000016307	-	100	98.016	Echinops_telfairi
ENSCPBG00000026195	SRP54	100	87.698	ENSEBUG00000009437	-	100	87.698	Eptatretus_burgeri
ENSCPBG00000026195	SRP54	100	99.206	ENSEASG00005002057	SRP54	100	99.206	Equus_asinus_asinus
ENSCPBG00000026195	SRP54	99	98.996	ENSECAG00000018042	SRP54	98	98.996	Equus_caballus
ENSCPBG00000026195	SRP54	100	82.540	ENSEEUG00000001511	SRP54	100	82.540	Erinaceus_europaeus
ENSCPBG00000026195	SRP54	100	95.238	ENSELUG00000003395	srp54	100	95.238	Esox_lucius
ENSCPBG00000026195	SRP54	100	99.008	ENSFCAG00000032033	SRP54	100	99.008	Felis_catus
ENSCPBG00000026195	SRP54	100	99.603	ENSFALG00000005995	SRP54	100	99.603	Ficedula_albicollis
ENSCPBG00000026195	SRP54	100	99.206	ENSFDAG00000016767	SRP54	100	99.206	Fukomys_damarensis
ENSCPBG00000026195	SRP54	100	95.437	ENSFHEG00000004263	srp54	100	95.437	Fundulus_heteroclitus
ENSCPBG00000026195	SRP54	95	90.167	ENSGMOG00000011391	srp54	100	90.167	Gadus_morhua
ENSCPBG00000026195	SRP54	100	99.603	ENSGALG00000023135	SRP54	100	99.603	Gallus_gallus
ENSCPBG00000026195	SRP54	100	96.032	ENSGAFG00000011586	srp54	100	96.032	Gambusia_affinis
ENSCPBG00000026195	SRP54	100	95.437	ENSGACG00000004181	srp54	100	95.437	Gasterosteus_aculeatus
ENSCPBG00000026195	SRP54	100	100.000	ENSGAGG00000014766	SRP54	100	100.000	Gopherus_agassizii
ENSCPBG00000026195	SRP54	100	99.206	ENSGGOG00000002926	SRP54	100	99.206	Gorilla_gorilla
ENSCPBG00000026195	SRP54	100	96.032	ENSHBUG00000005678	srp54	100	96.032	Haplochromis_burtoni
ENSCPBG00000026195	SRP54	100	99.206	ENSHGLG00000002850	SRP54	100	99.206	Heterocephalus_glaber_female
ENSCPBG00000026195	SRP54	100	99.206	ENSHGLG00100005263	SRP54	100	99.206	Heterocephalus_glaber_male
ENSCPBG00000026195	SRP54	100	68.317	ENSHGLG00100007281	-	100	68.317	Heterocephalus_glaber_male
ENSCPBG00000026195	SRP54	100	94.048	ENSHCOG00000021127	srp54	100	94.048	Hippocampus_comes
ENSCPBG00000026195	SRP54	100	95.635	ENSIPUG00000001420	srp54	100	95.635	Ictalurus_punctatus
ENSCPBG00000026195	SRP54	100	99.206	ENSSTOG00000016023	SRP54	100	99.206	Ictidomys_tridecemlineatus
ENSCPBG00000026195	SRP54	100	94.048	ENSJJAG00000013417	-	100	94.048	Jaculus_jaculus
ENSCPBG00000026195	SRP54	87	76.136	ENSJJAG00000016404	-	100	76.136	Jaculus_jaculus
ENSCPBG00000026195	SRP54	100	95.437	ENSKMAG00000007707	srp54	100	95.437	Kryptolebias_marmoratus
ENSCPBG00000026195	SRP54	100	95.833	ENSLBEG00000021122	srp54	100	95.833	Labrus_bergylta
ENSCPBG00000026195	SRP54	100	95.833	ENSLBEG00000018690	srp54	100	95.833	Labrus_bergylta
ENSCPBG00000026195	SRP54	100	96.032	ENSLACG00000017890	SRP54	100	96.032	Latimeria_chalumnae
ENSCPBG00000026195	SRP54	100	96.825	ENSLOCG00000009440	srp54	100	96.825	Lepisosteus_oculatus
ENSCPBG00000026195	SRP54	100	99.206	ENSLAFG00000012007	SRP54	100	99.206	Loxodonta_africana
ENSCPBG00000026195	SRP54	100	99.206	ENSMFAG00000044371	SRP54	100	99.206	Macaca_fascicularis
ENSCPBG00000026195	SRP54	100	99.206	ENSMMUG00000015073	FAM177A1	100	99.206	Macaca_mulatta
ENSCPBG00000026195	SRP54	100	99.206	ENSMNEG00000006947	SRP54	100	99.206	Macaca_nemestrina
ENSCPBG00000026195	SRP54	100	99.206	ENSMLEG00000042251	SRP54	100	99.206	Mandrillus_leucophaeus
ENSCPBG00000026195	SRP54	100	96.032	ENSMAMG00000004803	srp54	100	96.032	Mastacembelus_armatus
ENSCPBG00000026195	SRP54	100	96.032	ENSMZEG00005027528	srp54	100	96.032	Maylandia_zebra
ENSCPBG00000026195	SRP54	100	94.862	ENSMGAG00000012481	SRP54	100	94.862	Meleagris_gallopavo
ENSCPBG00000026195	SRP54	100	99.008	ENSMAUG00000014447	-	100	99.008	Mesocricetus_auratus
ENSCPBG00000026195	SRP54	100	99.206	ENSMICG00000010270	SRP54	100	99.206	Microcebus_murinus
ENSCPBG00000026195	SRP54	87	98.864	ENSMOCG00000000948	-	100	98.864	Microtus_ochrogaster
ENSCPBG00000026195	SRP54	90	92.731	ENSMMOG00000020303	srp54	99	92.731	Mola_mola
ENSCPBG00000026195	SRP54	100	99.008	ENSMODG00000012925	-	100	99.008	Monodelphis_domestica
ENSCPBG00000026195	SRP54	100	99.008	ENSMODG00000023150	-	100	99.008	Monodelphis_domestica
ENSCPBG00000026195	SRP54	88	95.034	ENSMALG00000009163	srp54	98	95.034	Monopterus_albus
ENSCPBG00000026195	SRP54	100	99.008	MGP_CAROLIEiJ_G0017754	-	100	99.008	Mus_caroli
ENSCPBG00000026195	SRP54	100	99.008	ENSMUSG00000112449	Srp54b	100	99.008	Mus_musculus
ENSCPBG00000026195	SRP54	100	98.214	ENSMUSG00000079108	Srp54c	100	98.214	Mus_musculus
ENSCPBG00000026195	SRP54	100	99.008	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSCPBG00000026195	SRP54	100	99.008	MGP_PahariEiJ_G0029510	-	100	99.008	Mus_pahari
ENSCPBG00000026195	SRP54	100	99.206	ENSMPUG00000016302	SRP54	100	99.206	Mustela_putorius_furo
ENSCPBG00000026195	SRP54	100	98.611	ENSMLUG00000008958	SRP54	100	98.611	Myotis_lucifugus
ENSCPBG00000026195	SRP54	100	89.087	ENSNGAG00000019806	-	100	89.087	Nannospalax_galili
ENSCPBG00000026195	SRP54	87	95.682	ENSNBRG00000006000	srp54	100	95.682	Neolamprologus_brichardi
ENSCPBG00000026195	SRP54	100	99.206	ENSNLEG00000003496	SRP54	100	99.206	Nomascus_leucogenys
ENSCPBG00000026195	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSCPBG00000026195	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSCPBG00000026195	SRP54	100	99.206	ENSODEG00000004865	SRP54	100	99.206	Octodon_degus
ENSCPBG00000026195	SRP54	100	96.032	ENSONIG00000011768	srp54	100	96.032	Oreochromis_niloticus
ENSCPBG00000026195	SRP54	100	99.206	ENSOANG00000014051	SRP54	100	99.206	Ornithorhynchus_anatinus
ENSCPBG00000026195	SRP54	100	98.611	ENSOCUG00000007838	SRP54	100	98.611	Oryctolagus_cuniculus
ENSCPBG00000026195	SRP54	100	95.833	ENSORLG00000010027	srp54	100	95.833	Oryzias_latipes
ENSCPBG00000026195	SRP54	100	95.833	ENSORLG00020001878	srp54	100	95.833	Oryzias_latipes_hni
ENSCPBG00000026195	SRP54	100	95.833	ENSORLG00015021866	srp54	100	95.833	Oryzias_latipes_hsok
ENSCPBG00000026195	SRP54	100	95.635	ENSOMEG00000020952	srp54	100	95.635	Oryzias_melastigma
ENSCPBG00000026195	SRP54	100	99.206	ENSOGAG00000012188	SRP54	100	99.206	Otolemur_garnettii
ENSCPBG00000026195	SRP54	100	99.206	ENSOARG00000007160	SRP54	100	99.206	Ovis_aries
ENSCPBG00000026195	SRP54	100	99.206	ENSPPAG00000017434	SRP54	100	99.206	Pan_paniscus
ENSCPBG00000026195	SRP54	100	98.016	ENSPPRG00000014047	SRP54	100	98.016	Panthera_pardus
ENSCPBG00000026195	SRP54	100	99.008	ENSPTIG00000000744	SRP54	96	99.008	Panthera_tigris_altaica
ENSCPBG00000026195	SRP54	100	99.206	ENSPTRG00000006259	FAM177A1	100	99.206	Pan_troglodytes
ENSCPBG00000026195	SRP54	100	99.206	ENSPANG00000023853	SRP54	100	99.206	Papio_anubis
ENSCPBG00000026195	SRP54	100	95.635	ENSPKIG00000001953	srp54	100	95.635	Paramormyrops_kingsleyae
ENSCPBG00000026195	SRP54	100	99.802	ENSPSIG00000006476	SRP54	100	99.802	Pelodiscus_sinensis
ENSCPBG00000026195	SRP54	91	92.391	ENSPMGG00000004127	srp54	99	92.391	Periophthalmus_magnuspinnatus
ENSCPBG00000026195	SRP54	100	86.905	ENSPEMG00000019634	-	100	86.905	Peromyscus_maniculatus_bairdii
ENSCPBG00000026195	SRP54	100	88.889	ENSPMAG00000006078	-	100	88.889	Petromyzon_marinus
ENSCPBG00000026195	SRP54	100	99.008	ENSPCIG00000016175	SRP54	100	99.008	Phascolarctos_cinereus
ENSCPBG00000026195	SRP54	100	96.032	ENSPFOG00000008870	srp54	100	96.032	Poecilia_formosa
ENSCPBG00000026195	SRP54	100	96.032	ENSPLAG00000009889	srp54	100	96.032	Poecilia_latipinna
ENSCPBG00000026195	SRP54	100	96.032	ENSPMEG00000008601	srp54	100	96.032	Poecilia_mexicana
ENSCPBG00000026195	SRP54	100	96.032	ENSPREG00000004505	srp54	100	96.032	Poecilia_reticulata
ENSCPBG00000026195	SRP54	100	94.048	ENSPPYG00000005739	SRP54	100	94.048	Pongo_abelii
ENSCPBG00000026195	SRP54	100	95.040	ENSPCAG00000006268	SRP54	100	95.040	Procavia_capensis
ENSCPBG00000026195	SRP54	100	97.228	ENSPCOG00000022473	SRP54	100	97.228	Propithecus_coquereli
ENSCPBG00000026195	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSCPBG00000026195	SRP54	100	96.032	ENSPNYG00000009717	srp54	100	96.032	Pundamilia_nyererei
ENSCPBG00000026195	SRP54	100	96.230	ENSPNAG00000008544	srp54	100	96.230	Pygocentrus_nattereri
ENSCPBG00000026195	SRP54	100	98.810	ENSRNOG00000032776	Srp54a	100	98.810	Rattus_norvegicus
ENSCPBG00000026195	SRP54	100	99.206	ENSRROG00000041292	SRP54	100	99.206	Rhinopithecus_roxellana
ENSCPBG00000026195	SRP54	86	53.061	YPR088C	SRP54	95	48.467	Saccharomyces_cerevisiae
ENSCPBG00000026195	SRP54	94	99.156	ENSSBOG00000035145	SRP54	100	99.156	Saimiri_boliviensis_boliviensis
ENSCPBG00000026195	SRP54	68	99.417	ENSSHAG00000000671	SRP54	100	99.417	Sarcophilus_harrisii
ENSCPBG00000026195	SRP54	100	96.230	ENSSFOG00015013920	srp54	100	96.230	Scleropages_formosus
ENSCPBG00000026195	SRP54	100	89.888	ENSSMAG00000002441	srp54	100	89.888	Scophthalmus_maximus
ENSCPBG00000026195	SRP54	100	95.635	ENSSDUG00000018586	srp54	100	95.635	Seriola_dumerili
ENSCPBG00000026195	SRP54	100	95.437	ENSSLDG00000010476	srp54	100	95.437	Seriola_lalandi_dorsalis
ENSCPBG00000026195	SRP54	100	99.206	ENSSARG00000002744	SRP54	100	99.206	Sorex_araneus
ENSCPBG00000026195	SRP54	100	100.000	ENSSPUG00000013101	SRP54	100	100.000	Sphenodon_punctatus
ENSCPBG00000026195	SRP54	100	95.833	ENSSPAG00000002354	srp54	100	95.833	Stegastes_partitus
ENSCPBG00000026195	SRP54	100	99.206	ENSSSCG00000001955	SRP54	100	99.206	Sus_scrofa
ENSCPBG00000026195	SRP54	94	99.578	ENSTGUG00000011945	-	95	99.578	Taeniopygia_guttata
ENSCPBG00000026195	SRP54	100	95.040	ENSTRUG00000007057	srp54	100	95.040	Takifugu_rubripes
ENSCPBG00000026195	SRP54	100	94.643	ENSTNIG00000002589	srp54	100	94.643	Tetraodon_nigroviridis
ENSCPBG00000026195	SRP54	89	90.604	ENSTBEG00000011409	SRP54	100	90.604	Tupaia_belangeri
ENSCPBG00000026195	SRP54	100	89.087	ENSTTRG00000000928	SRP54	100	89.087	Tursiops_truncatus
ENSCPBG00000026195	SRP54	52	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSCPBG00000026195	SRP54	100	99.206	ENSUMAG00000011234	SRP54	100	99.206	Ursus_maritimus
ENSCPBG00000026195	SRP54	94	98.945	ENSVPAG00000005668	SRP54	100	98.945	Vicugna_pacos
ENSCPBG00000026195	SRP54	100	99.206	ENSVVUG00000019962	SRP54	100	99.206	Vulpes_vulpes
ENSCPBG00000026195	SRP54	100	82.249	ENSXETG00000012290	srp54	100	82.249	Xenopus_tropicalis
ENSCPBG00000026195	SRP54	88	95.485	ENSXCOG00000004658	srp54	96	95.485	Xiphophorus_couchianus
ENSCPBG00000026195	SRP54	100	96.032	ENSXMAG00000018315	srp54	100	96.032	Xiphophorus_maculatus