EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026222 (Gene tree)
Gene ID: -
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 77210 bases
Position: chrKK083132.1:105775-182984
Accession: 7877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039021	Not1	PF04054.15	1.1e-152	1	1
ENSCPBP00000039015	Not1	PF04054.15	1.2e-152	1	1
ENSCPBP00000039012	Not1	PF04054.15	1.2e-152	1	1
ENSCPBP00000038989	Not1	PF04054.15	1.2e-152	1	1
ENSCPBP00000039020	Not1	PF04054.15	1.2e-152	1	1
ENSCPBP00000039019	Not1	PF04054.15	1.7e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045724	CNOT1-202	6921	-	ENSCPBP00000039012	2306 (aa)	-	-
ENSCPBT00000045727	CNOT1-203	6870	-	ENSCPBP00000039015	2289 (aa)	-	-
ENSCPBT00000045735	CNOT1-204	6867	-	ENSCPBP00000039019	2288 (aa)	-	-
ENSCPBT00000045699	CNOT1-201	7044	-	ENSCPBP00000038989	2347 (aa)	-	-
ENSCPBT00000045738	CNOT1-205	6831	-	ENSCPBP00000039020	2276 (aa)	-	-
ENSCPBT00000045739	CNOT1-206	6615	-	ENSCPBP00000039021	2204 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000026222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026222	CNOT1	99	98.611	ENSG00000125107	CNOT1	99	98.858	Homo_sapiens
ENSCPBG00000026222	CNOT1	96	96.774	ENSAPOG00000005042	cnot1	98	96.774	Acanthochromis_polyacanthus
ENSCPBG00000026222	CNOT1	99	98.611	ENSAMEG00000017298	CNOT1	95	98.611	Ailuropoda_melanoleuca
ENSCPBG00000026222	CNOT1	90	97.727	ENSACIG00000016003	cnot1	94	97.727	Amphilophus_citrinellus
ENSCPBG00000026222	CNOT1	98	95.842	ENSAPEG00000022342	cnot1	93	95.842	Amphiprion_percula
ENSCPBG00000026222	CNOT1	98	95.842	ENSATEG00000012892	cnot1	98	95.972	Anabas_testudineus
ENSCPBG00000026222	CNOT1	99	98.613	ENSAPLG00000007162	CNOT1	98	95.959	Anas_platyrhynchos
ENSCPBG00000026222	CNOT1	91	95.170	ENSACAG00000001602	CNOT1	96	95.170	Anolis_carolinensis
ENSCPBG00000026222	CNOT1	99	94.455	ENSANAG00000038198	CNOT1	98	94.259	Aotus_nancymaae
ENSCPBG00000026222	CNOT1	98	95.842	ENSACLG00000014234	cnot1	98	96.914	Astatotilapia_calliptera
ENSCPBG00000026222	CNOT1	98	95.644	ENSAMXG00000013170	cnot1	93	95.644	Astyanax_mexicanus
ENSCPBG00000026222	CNOT1	99	98.611	ENSBTAG00000020782	CNOT1	98	98.606	Bos_taurus
ENSCPBG00000026222	CNOT1	82	53.770	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSCPBG00000026222	CNOT1	99	98.611	ENSCJAG00000011318	CNOT1	100	94.364	Callithrix_jacchus
ENSCPBG00000026222	CNOT1	99	97.655	ENSCAFG00000008426	CNOT1	95	97.655	Canis_familiaris
ENSCPBG00000026222	CNOT1	99	97.091	ENSCAFG00020010156	CNOT1	98	97.091	Canis_lupus_dingo
ENSCPBG00000026222	CNOT1	99	98.611	ENSCHIG00000010452	CNOT1	95	98.611	Capra_hircus
ENSCPBG00000026222	CNOT1	99	98.611	ENSTSYG00000006888	CNOT1	98	96.056	Carlito_syrichta
ENSCPBG00000026222	CNOT1	99	98.472	ENSCPOG00000013026	CNOT1	95	98.472	Cavia_porcellus
ENSCPBG00000026222	CNOT1	99	98.611	ENSCCAG00000026333	CNOT1	98	95.696	Cebus_capucinus
ENSCPBG00000026222	CNOT1	99	98.611	ENSCATG00000032625	CNOT1	98	95.968	Cercocebus_atys
ENSCPBG00000026222	CNOT1	99	98.472	ENSCLAG00000006289	CNOT1	95	98.472	Chinchilla_lanigera
ENSCPBG00000026222	CNOT1	99	98.611	ENSCSAG00000004731	CNOT1	95	98.611	Chlorocebus_sabaeus
ENSCPBG00000026222	CNOT1	79	100.000	ENSCHOG00000009712	CNOT1	80	100.000	Choloepus_hoffmanni
ENSCPBG00000026222	CNOT1	98	82.258	ENSCING00000009149	-	93	81.275	Ciona_intestinalis
ENSCPBG00000026222	CNOT1	89	81.363	ENSCSAVG00000002414	-	94	81.984	Ciona_savignyi
ENSCPBG00000026222	CNOT1	99	99.583	ENSCANG00000040534	CNOT1	95	99.583	Colobus_angolensis_palliatus
ENSCPBG00000026222	CNOT1	99	98.472	ENSCGRG00001016365	Cnot1	98	95.486	Cricetulus_griseus_chok1gshd
ENSCPBG00000026222	CNOT1	99	98.472	ENSCGRG00000001714	Cnot1	98	95.486	Cricetulus_griseus_crigri
ENSCPBG00000026222	CNOT1	98	95.446	ENSCVAG00000018930	cnot1	93	95.446	Cyprinodon_variegatus
ENSCPBG00000026222	CNOT1	98	95.248	ENSDARG00000004174	cnot1	93	95.248	Danio_rerio
ENSCPBG00000026222	CNOT1	99	95.839	ENSDNOG00000013250	CNOT1	98	93.612	Dasypus_novemcinctus
ENSCPBG00000026222	CNOT1	90	68.815	FBgn0085436	Not1	94	67.061	Drosophila_melanogaster
ENSCPBG00000026222	CNOT1	83	96.296	ENSETEG00000012806	CNOT1	80	97.139	Echinops_telfairi
ENSCPBG00000026222	CNOT1	79	82.212	ENSEBUG00000011534	cnot1	93	82.212	Eptatretus_burgeri
ENSCPBG00000026222	CNOT1	99	99.583	ENSEASG00005005819	CNOT1	98	99.583	Equus_asinus_asinus
ENSCPBG00000026222	CNOT1	99	98.611	ENSECAG00000009889	CNOT1	98	99.579	Equus_caballus
ENSCPBG00000026222	CNOT1	87	97.426	ENSEEUG00000006015	CNOT1	83	98.667	Erinaceus_europaeus
ENSCPBG00000026222	CNOT1	98	92.015	ENSELUG00000014085	cnot1	98	88.743	Esox_lucius
ENSCPBG00000026222	CNOT1	99	99.583	ENSFCAG00000025155	CNOT1	97	98.611	Felis_catus
ENSCPBG00000026222	CNOT1	99	98.611	ENSFALG00000007285	CNOT1	98	95.910	Ficedula_albicollis
ENSCPBG00000026222	CNOT1	99	98.472	ENSFDAG00000013399	CNOT1	98	95.837	Fukomys_damarensis
ENSCPBG00000026222	CNOT1	98	95.050	ENSFHEG00000020574	cnot1	93	95.050	Fundulus_heteroclitus
ENSCPBG00000026222	CNOT1	88	93.929	ENSGMOG00000012864	cnot1	92	93.929	Gadus_morhua
ENSCPBG00000026222	CNOT1	99	98.472	ENSGALG00000002301	CNOT1	98	95.995	Gallus_gallus
ENSCPBG00000026222	CNOT1	99	95.139	ENSGAFG00000015005	cnot1	95	95.139	Gambusia_affinis
ENSCPBG00000026222	CNOT1	88	93.950	ENSGACG00000002606	cnot1	100	95.388	Gasterosteus_aculeatus
ENSCPBG00000026222	CNOT1	99	99.028	ENSGAGG00000022646	CNOT1	98	99.712	Gopherus_agassizii
ENSCPBG00000026222	CNOT1	99	98.611	ENSGGOG00000009547	CNOT1	95	98.611	Gorilla_gorilla
ENSCPBG00000026222	CNOT1	98	95.842	ENSHBUG00000001729	cnot1	98	96.914	Haplochromis_burtoni
ENSCPBG00000026222	CNOT1	99	98.472	ENSHGLG00000014322	CNOT1	98	95.749	Heterocephalus_glaber_female
ENSCPBG00000026222	CNOT1	98	94.466	ENSHCOG00000006501	cnot1	93	94.466	Hippocampus_comes
ENSCPBG00000026222	CNOT1	98	93.359	ENSIPUG00000011915	cnot1	98	89.117	Ictalurus_punctatus
ENSCPBG00000026222	CNOT1	99	98.472	ENSSTOG00000005490	CNOT1	98	95.749	Ictidomys_tridecemlineatus
ENSCPBG00000026222	CNOT1	99	97.917	ENSJJAG00000000633	Cnot1	98	95.048	Jaculus_jaculus
ENSCPBG00000026222	CNOT1	98	95.644	ENSKMAG00000006149	cnot1	93	95.644	Kryptolebias_marmoratus
ENSCPBG00000026222	CNOT1	93	96.614	ENSLBEG00000004740	cnot1	98	96.614	Labrus_bergylta
ENSCPBG00000026222	CNOT1	99	97.917	ENSLACG00000010869	CNOT1	96	97.917	Latimeria_chalumnae
ENSCPBG00000026222	CNOT1	98	96.040	ENSLOCG00000006324	cnot1	93	96.040	Lepisosteus_oculatus
ENSCPBG00000026222	CNOT1	99	98.472	ENSLAFG00000000098	CNOT1	95	98.472	Loxodonta_africana
ENSCPBG00000026222	CNOT1	99	99.583	ENSMFAG00000035888	CNOT1	95	99.583	Macaca_fascicularis
ENSCPBG00000026222	CNOT1	99	98.611	ENSMMUG00000014625	CNOT1	98	95.925	Macaca_mulatta
ENSCPBG00000026222	CNOT1	99	99.583	ENSMNEG00000031820	CNOT1	97	98.611	Macaca_nemestrina
ENSCPBG00000026222	CNOT1	99	95.694	ENSMLEG00000040933	CNOT1	98	94.479	Mandrillus_leucophaeus
ENSCPBG00000026222	CNOT1	98	93.465	ENSMAMG00000016524	cnot1	98	89.161	Mastacembelus_armatus
ENSCPBG00000026222	CNOT1	96	96.914	ENSMZEG00005016210	cnot1	98	96.914	Maylandia_zebra
ENSCPBG00000026222	CNOT1	99	98.472	ENSMGAG00000001908	CNOT1	98	96.243	Meleagris_gallopavo
ENSCPBG00000026222	CNOT1	98	98.606	ENSMICG00000007071	CNOT1	98	95.749	Microcebus_murinus
ENSCPBG00000026222	CNOT1	99	98.472	ENSMOCG00000017969	Cnot1	98	95.530	Microtus_ochrogaster
ENSCPBG00000026222	CNOT1	96	93.548	ENSMMOG00000019134	cnot1	98	93.548	Mola_mola
ENSCPBG00000026222	CNOT1	98	96.047	ENSMODG00000014199	CNOT1	98	94.634	Monodelphis_domestica
ENSCPBG00000026222	CNOT1	98	95.644	ENSMALG00000008645	cnot1	93	95.644	Monopterus_albus
ENSCPBG00000026222	CNOT1	97	98.333	MGP_CAROLIEiJ_G0031430	Cnot1	90	98.551	Mus_caroli
ENSCPBG00000026222	CNOT1	99	98.472	ENSMUSG00000036550	Cnot1	98	95.574	Mus_musculus
ENSCPBG00000026222	CNOT1	99	98.472	MGP_PahariEiJ_G0023028	Cnot1	98	95.530	Mus_pahari
ENSCPBG00000026222	CNOT1	99	98.472	MGP_SPRETEiJ_G0032549	Cnot1	98	95.574	Mus_spretus
ENSCPBG00000026222	CNOT1	99	98.611	ENSMPUG00000004830	CNOT1	95	98.611	Mustela_putorius_furo
ENSCPBG00000026222	CNOT1	98	97.822	ENSMLUG00000003728	CNOT1	98	94.248	Myotis_lucifugus
ENSCPBG00000026222	CNOT1	99	98.611	ENSNGAG00000018628	Cnot1	98	95.837	Nannospalax_galili
ENSCPBG00000026222	CNOT1	94	95.972	ENSNBRG00000019358	cnot1	98	96.914	Neolamprologus_brichardi
ENSCPBG00000026222	CNOT1	99	98.611	ENSNLEG00000003566	CNOT1	98	95.968	Nomascus_leucogenys
ENSCPBG00000026222	CNOT1	86	97.980	ENSMEUG00000006145	CNOT1	86	97.980	Notamacropus_eugenii
ENSCPBG00000026222	CNOT1	85	100.000	ENSOPRG00000005604	CNOT1	83	100.000	Ochotona_princeps
ENSCPBG00000026222	CNOT1	99	98.472	ENSODEG00000016337	CNOT1	98	95.793	Octodon_degus
ENSCPBG00000026222	CNOT1	98	95.842	ENSONIG00000007358	cnot1	93	95.842	Oreochromis_niloticus
ENSCPBG00000026222	CNOT1	91	95.909	ENSOANG00000012109	CNOT1	100	94.820	Ornithorhynchus_anatinus
ENSCPBG00000026222	CNOT1	99	98.611	ENSOCUG00000006911	CNOT1	95	98.611	Oryctolagus_cuniculus
ENSCPBG00000026222	CNOT1	98	95.644	ENSORLG00000013734	cnot1	93	95.644	Oryzias_latipes
ENSCPBG00000026222	CNOT1	99	88.583	ENSORLG00020017012	cnot1	98	88.670	Oryzias_latipes_hni
ENSCPBG00000026222	CNOT1	99	88.495	ENSORLG00015007091	cnot1	98	88.451	Oryzias_latipes_hsok
ENSCPBG00000026222	CNOT1	99	88.024	ENSOMEG00000015124	cnot1	98	88.330	Oryzias_melastigma
ENSCPBG00000026222	CNOT1	98	97.822	ENSOGAG00000000543	CNOT1	98	94.674	Otolemur_garnettii
ENSCPBG00000026222	CNOT1	99	98.611	ENSOARG00000001567	CNOT1	95	98.611	Ovis_aries
ENSCPBG00000026222	CNOT1	99	99.583	ENSPPAG00000022013	CNOT1	95	99.583	Pan_paniscus
ENSCPBG00000026222	CNOT1	99	98.611	ENSPPRG00000004867	CNOT1	95	98.611	Panthera_pardus
ENSCPBG00000026222	CNOT1	99	98.611	ENSPTIG00000012589	CNOT1	95	98.611	Panthera_tigris_altaica
ENSCPBG00000026222	CNOT1	99	99.583	ENSPTRG00000008183	CNOT1	95	99.583	Pan_troglodytes
ENSCPBG00000026222	CNOT1	98	98.606	ENSPANG00000020901	CNOT1	93	98.606	Papio_anubis
ENSCPBG00000026222	CNOT1	98	96.040	ENSPKIG00000023538	CNOT1	94	96.040	Paramormyrops_kingsleyae
ENSCPBG00000026222	CNOT1	96	92.978	ENSPKIG00000002914	CNOT1	98	92.978	Paramormyrops_kingsleyae
ENSCPBG00000026222	CNOT1	99	98.611	ENSPSIG00000005499	CNOT1	98	96.762	Pelodiscus_sinensis
ENSCPBG00000026222	CNOT1	98	89.505	ENSPMAG00000009381	cnot1	93	89.505	Petromyzon_marinus
ENSCPBG00000026222	CNOT1	99	99.444	ENSPCIG00000007343	CNOT1	98	99.444	Phascolarctos_cinereus
ENSCPBG00000026222	CNOT1	97	95.208	ENSPFOG00000003497	cnot1	93	95.208	Poecilia_formosa
ENSCPBG00000026222	CNOT1	93	97.172	ENSPLAG00000014018	cnot1	98	97.172	Poecilia_latipinna
ENSCPBG00000026222	CNOT1	93	97.172	ENSPMEG00000005868	cnot1	98	97.172	Poecilia_mexicana
ENSCPBG00000026222	CNOT1	93	97.172	ENSPREG00000018793	cnot1	98	97.172	Poecilia_reticulata
ENSCPBG00000026222	CNOT1	98	97.822	ENSPPYG00000007410	CNOT1	98	94.759	Pongo_abelii
ENSCPBG00000026222	CNOT1	86	97.887	ENSPCAG00000003241	CNOT1	84	97.887	Procavia_capensis
ENSCPBG00000026222	CNOT1	99	99.583	ENSPCOG00000027139	CNOT1	95	99.583	Propithecus_coquereli
ENSCPBG00000026222	CNOT1	99	93.123	ENSPVAG00000004243	CNOT1	98	92.075	Pteropus_vampyrus
ENSCPBG00000026222	CNOT1	96	96.914	ENSPNYG00000012919	cnot1	98	96.914	Pundamilia_nyererei
ENSCPBG00000026222	CNOT1	98	95.644	ENSPNAG00000000246	cnot1	93	95.644	Pygocentrus_nattereri
ENSCPBG00000026222	CNOT1	99	98.333	ENSRNOG00000012271	Cnot1	95	98.333	Rattus_norvegicus
ENSCPBG00000026222	CNOT1	99	99.583	ENSRBIG00000044598	CNOT1	95	99.583	Rhinopithecus_bieti
ENSCPBG00000026222	CNOT1	99	98.611	ENSRROG00000000906	CNOT1	98	95.968	Rhinopithecus_roxellana
ENSCPBG00000026222	CNOT1	59	30.882	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSCPBG00000026222	CNOT1	99	95.592	ENSSBOG00000029155	CNOT1	95	95.592	Saimiri_boliviensis_boliviensis
ENSCPBG00000026222	CNOT1	99	98.472	ENSSHAG00000012187	CNOT1	95	98.472	Sarcophilus_harrisii
ENSCPBG00000026222	CNOT1	99	90.048	ENSSFOG00015017614	cnot1	98	90.004	Scleropages_formosus
ENSCPBG00000026222	CNOT1	98	95.842	ENSSMAG00000013844	cnot1	98	96.914	Scophthalmus_maximus
ENSCPBG00000026222	CNOT1	96	96.774	ENSSDUG00000021491	cnot1	98	96.774	Seriola_dumerili
ENSCPBG00000026222	CNOT1	98	95.644	ENSSLDG00000014816	cnot1	98	96.774	Seriola_lalandi_dorsalis
ENSCPBG00000026222	CNOT1	86	100.000	ENSSARG00000000762	CNOT1	87	100.000	Sorex_araneus
ENSCPBG00000026222	CNOT1	98	95.842	ENSSPAG00000018802	cnot1	93	95.842	Stegastes_partitus
ENSCPBG00000026222	CNOT1	99	99.444	ENSSSCG00000002799	CNOT1	98	99.444	Sus_scrofa
ENSCPBG00000026222	CNOT1	99	98.611	ENSTGUG00000005919	CNOT1	98	95.957	Taeniopygia_guttata
ENSCPBG00000026222	CNOT1	98	96.008	ENSTNIG00000018706	cnot1	93	95.626	Tetraodon_nigroviridis
ENSCPBG00000026222	CNOT1	79	97.887	ENSTBEG00000000720	CNOT1	77	97.887	Tupaia_belangeri
ENSCPBG00000026222	CNOT1	94	98.611	ENSTTRG00000008460	CNOT1	90	98.611	Tursiops_truncatus
ENSCPBG00000026222	CNOT1	99	98.611	ENSUAMG00000009251	CNOT1	95	98.611	Ursus_americanus
ENSCPBG00000026222	CNOT1	99	98.611	ENSUMAG00000021291	CNOT1	95	98.611	Ursus_maritimus
ENSCPBG00000026222	CNOT1	95	97.822	ENSVPAG00000008846	CNOT1	95	95.228	Vicugna_pacos
ENSCPBG00000026222	CNOT1	99	97.091	ENSVVUG00000024037	CNOT1	98	97.091	Vulpes_vulpes
ENSCPBG00000026222	CNOT1	98	99.596	ENSXETG00000015900	cnot1	93	99.596	Xenopus_tropicalis
ENSCPBG00000026222	CNOT1	98	95.446	ENSXCOG00000013552	cnot1	93	95.446	Xiphophorus_couchianus
ENSCPBG00000026222	CNOT1	98	95.446	ENSXMAG00000006031	cnot1	93	95.446	Xiphophorus_maculatus