EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026327 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4455 bases
Position: chr4:48643968-48648422
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038011	RRM_1	PF00076.22	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044578	SLIRP-201	300	-	ENSCPBP00000038011	99 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000026327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026327	SLIRP	75	61.842	ENSG00000119705	SLIRP	88	65.672	Homo_sapiens
ENSCPBG00000026327	SLIRP	82	60.494	ENSAPOG00000001298	slirp	81	60.494	Acanthochromis_polyacanthus
ENSCPBG00000026327	SLIRP	90	53.933	ENSAMEG00000003975	SLIRP	98	53.933	Ailuropoda_melanoleuca
ENSCPBG00000026327	SLIRP	79	65.385	ENSACIG00000023083	slirp	77	65.385	Amphilophus_citrinellus
ENSCPBG00000026327	SLIRP	79	62.821	ENSAOCG00000006342	slirp	79	62.821	Amphiprion_ocellaris
ENSCPBG00000026327	SLIRP	79	62.821	ENSAPEG00000015917	slirp	79	62.821	Amphiprion_percula
ENSCPBG00000026327	SLIRP	79	62.821	ENSAPEG00000015719	-	80	62.821	Amphiprion_percula
ENSCPBG00000026327	SLIRP	82	64.198	ENSATEG00000013525	slirp	81	64.198	Anabas_testudineus
ENSCPBG00000026327	SLIRP	82	56.790	ENSAMXG00000018693	slirp	81	56.790	Astyanax_mexicanus
ENSCPBG00000026327	SLIRP	87	50.000	ENSCJAG00000016946	SLIRP	85	51.852	Callithrix_jacchus
ENSCPBG00000026327	SLIRP	71	60.000	ENSCAFG00020015876	-	63	60.000	Canis_lupus_dingo
ENSCPBG00000026327	SLIRP	85	52.381	ENSCCAG00000030130	SLIRP	75	52.381	Cebus_capucinus
ENSCPBG00000026327	SLIRP	71	58.571	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSCPBG00000026327	SLIRP	71	58.571	ENSCSAG00000011736	SLIRP	64	58.571	Chlorocebus_sabaeus
ENSCPBG00000026327	SLIRP	68	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSCPBG00000026327	SLIRP	71	55.714	ENSCGRG00001024068	Slirp	63	55.714	Cricetulus_griseus_chok1gshd
ENSCPBG00000026327	SLIRP	71	55.714	ENSCGRG00000017440	Slirp	63	55.714	Cricetulus_griseus_crigri
ENSCPBG00000026327	SLIRP	84	50.602	ENSCSEG00000015766	slirp	85	50.602	Cynoglossus_semilaevis
ENSCPBG00000026327	SLIRP	81	65.000	ENSCVAG00000012504	slirp	79	65.000	Cyprinodon_variegatus
ENSCPBG00000026327	SLIRP	78	59.740	ENSDARG00000097753	slirp	81	56.627	Danio_rerio
ENSCPBG00000026327	SLIRP	71	54.286	ENSDNOG00000007721	SLIRP	64	54.286	Dasypus_novemcinctus
ENSCPBG00000026327	SLIRP	69	54.412	ENSDORG00000012379	Slirp	61	54.412	Dipodomys_ordii
ENSCPBG00000026327	SLIRP	71	52.857	ENSETEG00000010345	SLIRP	81	47.191	Echinops_telfairi
ENSCPBG00000026327	SLIRP	71	54.286	ENSEASG00005020193	SLIRP	63	54.286	Equus_asinus_asinus
ENSCPBG00000026327	SLIRP	81	48.750	ENSEEUG00000007257	SLIRP	78	48.750	Erinaceus_europaeus
ENSCPBG00000026327	SLIRP	82	62.963	ENSELUG00000016800	slirp	80	62.963	Esox_lucius
ENSCPBG00000026327	SLIRP	88	51.136	ENSFCAG00000036326	SLIRP	88	51.136	Felis_catus
ENSCPBG00000026327	SLIRP	78	58.442	ENSFALG00000012583	SLIRP	75	58.228	Ficedula_albicollis
ENSCPBG00000026327	SLIRP	90	46.809	ENSFDAG00000008347	SLIRP	83	46.809	Fukomys_damarensis
ENSCPBG00000026327	SLIRP	62	60.656	ENSFHEG00000004709	slirp	66	60.656	Fundulus_heteroclitus
ENSCPBG00000026327	SLIRP	77	59.211	ENSGMOG00000016948	slirp	73	59.211	Gadus_morhua
ENSCPBG00000026327	SLIRP	86	60.465	ENSGALG00000031238	SLIRP	88	58.333	Gallus_gallus
ENSCPBG00000026327	SLIRP	80	58.228	ENSGAFG00000010998	slirp	79	58.228	Gambusia_affinis
ENSCPBG00000026327	SLIRP	78	62.338	ENSGACG00000020137	slirp	90	62.338	Gasterosteus_aculeatus
ENSCPBG00000026327	SLIRP	94	75.269	ENSGAGG00000009953	SLIRP	64	75.269	Gopherus_agassizii
ENSCPBG00000026327	SLIRP	73	62.500	ENSGGOG00000011059	-	72	65.672	Gorilla_gorilla
ENSCPBG00000026327	SLIRP	85	47.619	ENSHGLG00000018491	SLIRP	74	47.619	Heterocephalus_glaber_female
ENSCPBG00000026327	SLIRP	85	47.619	ENSHGLG00100014153	SLIRP	74	47.619	Heterocephalus_glaber_male
ENSCPBG00000026327	SLIRP	87	63.636	ENSHCOG00000006795	slirp	89	63.636	Hippocampus_comes
ENSCPBG00000026327	SLIRP	88	61.798	ENSIPUG00000010214	SLIRP	89	61.798	Ictalurus_punctatus
ENSCPBG00000026327	SLIRP	71	54.286	ENSSTOG00000034316	SLIRP	63	54.286	Ictidomys_tridecemlineatus
ENSCPBG00000026327	SLIRP	82	59.259	ENSKMAG00000002038	slirp	78	59.259	Kryptolebias_marmoratus
ENSCPBG00000026327	SLIRP	82	49.383	ENSLBEG00000007564	slirp	81	49.383	Labrus_bergylta
ENSCPBG00000026327	SLIRP	88	64.045	ENSLACG00000013434	SLIRP	86	64.045	Latimeria_chalumnae
ENSCPBG00000026327	SLIRP	71	58.571	ENSMFAG00000042960	SLIRP	85	54.321	Macaca_fascicularis
ENSCPBG00000026327	SLIRP	72	57.746	ENSMMUG00000029256	SLIRP	72	59.701	Macaca_mulatta
ENSCPBG00000026327	SLIRP	71	58.571	ENSMNEG00000028921	SLIRP	85	54.321	Macaca_nemestrina
ENSCPBG00000026327	SLIRP	68	59.701	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSCPBG00000026327	SLIRP	80	64.557	ENSMZEG00005004617	slirp	80	64.557	Maylandia_zebra
ENSCPBG00000026327	SLIRP	69	57.353	ENSMAUG00000003857	Slirp	61	57.353	Mesocricetus_auratus
ENSCPBG00000026327	SLIRP	74	57.534	ENSMICG00000012080	SLIRP	68	57.534	Microcebus_murinus
ENSCPBG00000026327	SLIRP	78	50.000	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSCPBG00000026327	SLIRP	82	61.728	ENSMMOG00000018268	slirp	81	61.728	Mola_mola
ENSCPBG00000026327	SLIRP	70	62.319	ENSMODG00000005207	-	97	62.319	Monodelphis_domestica
ENSCPBG00000026327	SLIRP	82	61.728	ENSMALG00000012581	slirp	83	61.728	Monopterus_albus
ENSCPBG00000026327	SLIRP	85	48.810	MGP_CAROLIEiJ_G0017995	Slirp	77	48.810	Mus_caroli
ENSCPBG00000026327	SLIRP	88	49.425	ENSMUSG00000021040	Slirp	87	49.425	Mus_musculus
ENSCPBG00000026327	SLIRP	85	51.190	MGP_SPRETEiJ_G0018840	Slirp	74	51.190	Mus_spretus
ENSCPBG00000026327	SLIRP	70	52.174	ENSMLUG00000024998	-	74	48.810	Myotis_lucifugus
ENSCPBG00000026327	SLIRP	71	52.857	ENSMLUG00000029544	-	74	48.810	Myotis_lucifugus
ENSCPBG00000026327	SLIRP	90	51.111	ENSNGAG00000016363	Slirp	87	51.111	Nannospalax_galili
ENSCPBG00000026327	SLIRP	74	58.904	ENSNLEG00000032459	-	73	61.765	Nomascus_leucogenys
ENSCPBG00000026327	SLIRP	72	59.155	ENSNLEG00000027238	-	79	60.870	Nomascus_leucogenys
ENSCPBG00000026327	SLIRP	71	60.000	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSCPBG00000026327	SLIRP	80	64.557	ENSONIG00000011692	slirp	80	64.557	Oreochromis_niloticus
ENSCPBG00000026327	SLIRP	70	66.667	ENSOANG00000022366	SLIRP	62	66.667	Ornithorhynchus_anatinus
ENSCPBG00000026327	SLIRP	86	61.176	ENSORLG00000010761	slirp	66	61.176	Oryzias_latipes
ENSCPBG00000026327	SLIRP	82	64.198	ENSORLG00020022188	slirp	81	64.198	Oryzias_latipes_hni
ENSCPBG00000026327	SLIRP	79	64.103	ENSORLG00015020171	slirp	77	64.103	Oryzias_latipes_hsok
ENSCPBG00000026327	SLIRP	82	65.432	ENSOMEG00000019321	slirp	81	65.432	Oryzias_melastigma
ENSCPBG00000026327	SLIRP	73	62.500	ENSPPAG00000040710	-	72	65.672	Pan_paniscus
ENSCPBG00000026327	SLIRP	82	53.086	ENSPPRG00000014350	SLIRP	81	53.086	Panthera_pardus
ENSCPBG00000026327	SLIRP	82	53.086	ENSPTIG00000014196	SLIRP	81	53.086	Panthera_tigris_altaica
ENSCPBG00000026327	SLIRP	73	62.500	ENSPTRG00000030691	SLIRP	72	65.672	Pan_troglodytes
ENSCPBG00000026327	SLIRP	71	60.000	ENSPANG00000026323	SLIRP	72	61.194	Papio_anubis
ENSCPBG00000026327	SLIRP	61	56.667	ENSPKIG00000008831	slirp	59	56.667	Paramormyrops_kingsleyae
ENSCPBG00000026327	SLIRP	83	69.512	ENSPMGG00000010541	slirp	94	69.512	Periophthalmus_magnuspinnatus
ENSCPBG00000026327	SLIRP	71	51.429	ENSPEMG00000013234	Slirp	69	51.429	Peromyscus_maniculatus_bairdii
ENSCPBG00000026327	SLIRP	76	50.667	ENSPMAG00000009355	slirp	83	50.667	Petromyzon_marinus
ENSCPBG00000026327	SLIRP	84	53.012	ENSPCIG00000026842	-	89	53.012	Phascolarctos_cinereus
ENSCPBG00000026327	SLIRP	80	58.228	ENSPFOG00000006758	slirp	79	58.228	Poecilia_formosa
ENSCPBG00000026327	SLIRP	80	58.228	ENSPLAG00000011140	slirp	79	58.228	Poecilia_latipinna
ENSCPBG00000026327	SLIRP	80	58.228	ENSPMEG00000019535	slirp	79	58.228	Poecilia_mexicana
ENSCPBG00000026327	SLIRP	80	58.228	ENSPREG00000011673	slirp	79	58.228	Poecilia_reticulata
ENSCPBG00000026327	SLIRP	71	61.429	ENSPPYG00000006030	SLIRP	64	61.429	Pongo_abelii
ENSCPBG00000026327	SLIRP	86	52.941	ENSPCOG00000015159	SLIRP	79	52.941	Propithecus_coquereli
ENSCPBG00000026327	SLIRP	82	60.494	ENSPNAG00000008633	slirp	82	60.494	Pygocentrus_nattereri
ENSCPBG00000026327	SLIRP	71	57.143	ENSRBIG00000031396	-	70	57.143	Rhinopithecus_bieti
ENSCPBG00000026327	SLIRP	71	60.000	ENSRBIG00000032222	-	72	61.194	Rhinopithecus_bieti
ENSCPBG00000026327	SLIRP	68	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSCPBG00000026327	SLIRP	71	55.714	ENSRBIG00000035817	-	64	55.714	Rhinopithecus_bieti
ENSCPBG00000026327	SLIRP	71	60.000	ENSRROG00000036656	-	72	61.194	Rhinopithecus_roxellana
ENSCPBG00000026327	SLIRP	71	58.571	ENSRROG00000035604	-	70	58.571	Rhinopithecus_roxellana
ENSCPBG00000026327	SLIRP	68	61.194	ENSRROG00000017133	-	70	61.194	Rhinopithecus_roxellana
ENSCPBG00000026327	SLIRP	71	60.000	ENSRROG00000041312	-	69	60.000	Rhinopithecus_roxellana
ENSCPBG00000026327	SLIRP	87	52.326	ENSSBOG00000020014	SLIRP	85	54.321	Saimiri_boliviensis_boliviensis
ENSCPBG00000026327	SLIRP	80	59.494	ENSSFOG00015011165	slirp	82	56.790	Scleropages_formosus
ENSCPBG00000026327	SLIRP	82	49.383	ENSSMAG00000012930	slirp	79	49.383	Scophthalmus_maximus
ENSCPBG00000026327	SLIRP	82	60.494	ENSSDUG00000021883	slirp	53	60.494	Seriola_dumerili
ENSCPBG00000026327	SLIRP	82	60.494	ENSSLDG00000023136	slirp	74	60.494	Seriola_lalandi_dorsalis
ENSCPBG00000026327	SLIRP	84	61.446	ENSSPUG00000009346	SLIRP	85	61.446	Sphenodon_punctatus
ENSCPBG00000026327	SLIRP	82	60.494	ENSSPAG00000013477	slirp	81	60.494	Stegastes_partitus
ENSCPBG00000026327	SLIRP	71	55.714	ENSSSCG00000028167	SLIRP	63	55.714	Sus_scrofa
ENSCPBG00000026327	SLIRP	78	57.143	ENSTGUG00000012337	SLIRP	75	56.962	Taeniopygia_guttata
ENSCPBG00000026327	SLIRP	80	60.000	ENSTRUG00000020127	slirp	81	57.317	Takifugu_rubripes
ENSCPBG00000026327	SLIRP	88	55.172	ENSUAMG00000022445	SLIRP	78	55.172	Ursus_americanus
ENSCPBG00000026327	SLIRP	88	55.172	ENSUMAG00000007166	SLIRP	78	55.172	Ursus_maritimus
ENSCPBG00000026327	SLIRP	71	51.429	ENSVPAG00000001781	SLIRP	65	51.429	Vicugna_pacos
ENSCPBG00000026327	SLIRP	71	60.000	ENSVVUG00000004436	SLIRP	63	58.571	Vulpes_vulpes
ENSCPBG00000026327	SLIRP	83	60.976	ENSXETG00000030343	SLIRP	92	60.976	Xenopus_tropicalis
ENSCPBG00000026327	SLIRP	80	56.962	ENSXCOG00000009422	slirp	79	56.962	Xiphophorus_couchianus
ENSCPBG00000026327	SLIRP	80	58.228	ENSXMAG00000015655	slirp	79	58.228	Xiphophorus_maculatus