EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026346 (Gene tree)
Gene ID: 101934851
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 23992 bases
Position: chr5:242246-266237
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038032	Isy1	PF06246.12	1e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044603	-	2106	-	ENSCPBP00000038032	281 (aa)	XP_005309145	UPI000388E250

Gene Model

Click here to download ENSCPBG00000026346's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026346	-	100	88.772	ENSG00000261796	ISY1-RAB43	86	89.123	Homo_sapiens
ENSCPBG00000026346	-	99	89.085	ENSG00000240682	ISY1	99	89.437	Homo_sapiens
ENSCPBG00000026346	-	99	89.085	ENSAMEG00000015341	-	86	89.437	Ailuropoda_melanoleuca
ENSCPBG00000026346	-	65	90.761	ENSACIG00000014723	isy1	73	91.257	Amphilophus_citrinellus
ENSCPBG00000026346	-	100	80.212	ENSAOCG00000007147	isy1	100	80.212	Amphiprion_ocellaris
ENSCPBG00000026346	-	100	71.203	ENSAPEG00000021883	isy1	100	71.203	Amphiprion_percula
ENSCPBG00000026346	-	70	76.617	ENSATEG00000009521	isy1	83	77.114	Anabas_testudineus
ENSCPBG00000026346	-	99	79.577	ENSAPLG00000014136	-	99	79.577	Anas_platyrhynchos
ENSCPBG00000026346	-	91	96.094	ENSACAG00000013166	-	99	96.094	Anolis_carolinensis
ENSCPBG00000026346	-	99	88.732	ENSANAG00000027120	-	99	89.085	Aotus_nancymaae
ENSCPBG00000026346	-	100	73.310	ENSACLG00000014430	isy1	100	73.310	Astatotilapia_calliptera
ENSCPBG00000026346	-	100	88.070	ENSAMXG00000005423	isy1	100	88.070	Astyanax_mexicanus
ENSCPBG00000026346	-	100	87.324	ENSBTAG00000030915	ISY1	100	88.028	Bos_taurus
ENSCPBG00000026346	-	94	49.442	WBGene00009966	isy-1	99	48.327	Caenorhabditis_elegans
ENSCPBG00000026346	-	99	88.732	ENSCJAG00000017419	-	99	89.085	Callithrix_jacchus
ENSCPBG00000026346	-	99	89.789	ENSCAFG00000004333	ISY1	99	90.141	Canis_familiaris
ENSCPBG00000026346	-	99	89.789	ENSCAFG00020004867	-	99	90.141	Canis_lupus_dingo
ENSCPBG00000026346	-	100	87.676	ENSCHIG00000008237	-	100	88.028	Capra_hircus
ENSCPBG00000026346	-	99	88.732	ENSTSYG00000013897	-	99	89.085	Carlito_syrichta
ENSCPBG00000026346	-	98	71.168	ENSCAPG00000016359	-	99	71.168	Cavia_aperea
ENSCPBG00000026346	-	99	89.789	ENSCPOG00000014735	-	99	90.141	Cavia_porcellus
ENSCPBG00000026346	-	99	89.085	ENSCCAG00000028517	-	99	89.437	Cebus_capucinus
ENSCPBG00000026346	-	99	89.437	ENSCATG00000030672	-	99	89.789	Cercocebus_atys
ENSCPBG00000026346	-	99	89.474	ENSCLAG00000007518	-	99	89.825	Chinchilla_lanigera
ENSCPBG00000026346	-	99	89.437	ENSCSAG00000008798	-	99	89.789	Chlorocebus_sabaeus
ENSCPBG00000026346	-	99	63.571	ENSCING00000000716	-	99	63.929	Ciona_intestinalis
ENSCPBG00000026346	-	100	63.763	ENSCSAVG00000008992	-	100	63.345	Ciona_savignyi
ENSCPBG00000026346	-	99	89.437	ENSCANG00000037761	-	99	89.789	Colobus_angolensis_palliatus
ENSCPBG00000026346	-	99	89.085	ENSCGRG00001003415	Isy1	99	89.437	Cricetulus_griseus_chok1gshd
ENSCPBG00000026346	-	99	89.085	ENSCGRG00000011641	Isy1	99	89.437	Cricetulus_griseus_crigri
ENSCPBG00000026346	-	92	70.115	ENSCSEG00000020382	isy1	95	73.092	Cynoglossus_semilaevis
ENSCPBG00000026346	-	100	79.505	ENSCVAG00000000650	isy1	100	79.152	Cyprinodon_variegatus
ENSCPBG00000026346	-	100	85.614	ENSDARG00000063466	isy1	100	85.614	Danio_rerio
ENSCPBG00000026346	-	99	89.123	ENSDNOG00000002763	-	99	89.474	Dasypus_novemcinctus
ENSCPBG00000026346	-	96	89.130	ENSDORG00000006886	Isy1	99	89.493	Dipodomys_ordii
ENSCPBG00000026346	-	95	63.469	FBgn0037550	CG9667	99	62.731	Drosophila_melanogaster
ENSCPBG00000026346	-	96	89.051	ENSETEG00000017009	-	100	89.416	Echinops_telfairi
ENSCPBG00000026346	-	53	74.242	ENSEBUG00000002888	isy1	61	85.106	Eptatretus_burgeri
ENSCPBG00000026346	-	96	85.870	ENSEASG00005015810	-	97	86.232	Equus_asinus_asinus
ENSCPBG00000026346	-	94	90.299	ENSECAG00000013768	-	88	90.672	Equus_caballus
ENSCPBG00000026346	-	100	87.063	ENSELUG00000000489	isy1	100	84.965	Esox_lucius
ENSCPBG00000026346	-	99	89.789	ENSFCAG00000008664	-	99	90.141	Felis_catus
ENSCPBG00000026346	-	100	92.553	ENSFALG00000000023	-	100	92.553	Ficedula_albicollis
ENSCPBG00000026346	-	100	85.461	ENSFALG00000014998	-	100	85.461	Ficedula_albicollis
ENSCPBG00000026346	-	96	88.809	ENSFDAG00000012661	-	94	89.170	Fukomys_damarensis
ENSCPBG00000026346	-	100	77.385	ENSFHEG00000006776	isy1	100	80.071	Fundulus_heteroclitus
ENSCPBG00000026346	-	76	85.714	ENSGMOG00000005635	isy1	74	85.714	Gadus_morhua
ENSCPBG00000026346	-	100	95.374	ENSGALG00000005012	-	100	95.374	Gallus_gallus
ENSCPBG00000026346	-	98	77.061	ENSGAFG00000019550	isy1	99	76.344	Gambusia_affinis
ENSCPBG00000026346	-	100	79.715	ENSGACG00000003342	isy1	100	79.715	Gasterosteus_aculeatus
ENSCPBG00000026346	-	97	98.529	ENSGAGG00000021274	-	97	98.431	Gopherus_agassizii
ENSCPBG00000026346	-	99	89.085	ENSGGOG00000038733	ISY1	99	89.437	Gorilla_gorilla
ENSCPBG00000026346	-	99	89.753	ENSHGLG00000002576	-	99	90.106	Heterocephalus_glaber_female
ENSCPBG00000026346	-	98	71.530	ENSHGLG00000017889	-	79	71.886	Heterocephalus_glaber_female
ENSCPBG00000026346	-	99	87.676	ENSHGLG00100004254	-	99	88.028	Heterocephalus_glaber_male
ENSCPBG00000026346	-	98	71.530	ENSHGLG00100005531	-	79	71.886	Heterocephalus_glaber_male
ENSCPBG00000026346	-	99	74.823	ENSHCOG00000014775	isy1	99	73.759	Hippocampus_comes
ENSCPBG00000026346	-	100	86.620	ENSIPUG00000011379	Isy1	100	87.676	Ictalurus_punctatus
ENSCPBG00000026346	-	99	88.380	ENSSTOG00000024769	-	99	88.732	Ictidomys_tridecemlineatus
ENSCPBG00000026346	-	78	87.783	ENSJJAG00000009635	Isy1	95	88.235	Jaculus_jaculus
ENSCPBG00000026346	-	100	91.844	ENSLACG00000004490	isy1	100	93.617	Latimeria_chalumnae
ENSCPBG00000026346	-	100	87.368	ENSLOCG00000013988	isy1	100	87.719	Lepisosteus_oculatus
ENSCPBG00000026346	-	99	80.212	ENSLAFG00000004015	-	99	80.565	Loxodonta_africana
ENSCPBG00000026346	-	99	89.437	ENSMFAG00000037074	-	99	89.789	Macaca_fascicularis
ENSCPBG00000026346	-	100	89.123	ENSMMUG00000011580	ISY1-RAB43	99	89.789	Macaca_mulatta
ENSCPBG00000026346	-	99	81.979	ENSMNEG00000043206	ISY1	99	82.332	Macaca_nemestrina
ENSCPBG00000026346	-	99	89.437	ENSMLEG00000033836	-	99	89.789	Mandrillus_leucophaeus
ENSCPBG00000026346	-	100	81.690	ENSMAMG00000009501	isy1	100	81.272	Mastacembelus_armatus
ENSCPBG00000026346	-	100	79.505	ENSMZEG00005012021	isy1	100	81.272	Maylandia_zebra
ENSCPBG00000026346	-	99	95.390	ENSMGAG00000005181	-	99	95.390	Meleagris_gallopavo
ENSCPBG00000026346	-	99	89.085	ENSMAUG00000008793	Isy1	99	89.437	Mesocricetus_auratus
ENSCPBG00000026346	-	96	85.818	ENSMICG00000037547	-	99	86.182	Microcebus_murinus
ENSCPBG00000026346	-	99	89.789	ENSMOCG00000000472	Isy1	99	90.141	Microtus_ochrogaster
ENSCPBG00000026346	-	99	72.069	ENSMMOG00000017810	isy1	99	72.069	Mola_mola
ENSCPBG00000026346	-	100	96.454	ENSMODG00000008387	-	100	96.454	Monodelphis_domestica
ENSCPBG00000026346	-	100	81.404	ENSMALG00000020650	isy1	100	81.690	Monopterus_albus
ENSCPBG00000026346	-	99	90.141	MGP_CAROLIEiJ_G0028619	Isy1	98	95.918	Mus_caroli
ENSCPBG00000026346	-	99	90.141	ENSMUSG00000030056	Isy1	98	95.918	Mus_musculus
ENSCPBG00000026346	-	99	78.596	MGP_PahariEiJ_G0022357	Isy1	99	78.947	Mus_pahari
ENSCPBG00000026346	-	99	90.141	MGP_SPRETEiJ_G0029631	Isy1	98	95.918	Mus_spretus
ENSCPBG00000026346	-	99	80.282	ENSMPUG00000017307	-	95	80.634	Mustela_putorius_furo
ENSCPBG00000026346	-	99	84.452	ENSMLUG00000011804	-	99	84.806	Myotis_lucifugus
ENSCPBG00000026346	-	99	90.141	ENSNGAG00000015207	Isy1	99	90.493	Nannospalax_galili
ENSCPBG00000026346	-	64	87.778	ENSNBRG00000006974	isy1	75	87.778	Neolamprologus_brichardi
ENSCPBG00000026346	-	99	89.437	ENSNLEG00000028747	ISY1	99	89.789	Nomascus_leucogenys
ENSCPBG00000026346	-	81	93.000	ENSMEUG00000008434	-	78	93.000	Notamacropus_eugenii
ENSCPBG00000026346	-	99	88.732	ENSOPRG00000005468	-	86	89.085	Ochotona_princeps
ENSCPBG00000026346	-	96	77.256	ENSODEG00000002067	-	95	77.617	Octodon_degus
ENSCPBG00000026346	-	88	75.000	ENSONIG00000000267	isy1	100	75.000	Oreochromis_niloticus
ENSCPBG00000026346	-	99	85.305	ENSOANG00000013141	-	99	85.305	Ornithorhynchus_anatinus
ENSCPBG00000026346	-	99	89.437	ENSOCUG00000003923	-	99	89.789	Oryctolagus_cuniculus
ENSCPBG00000026346	-	100	78.799	ENSORLG00000013250	isy1	100	78.799	Oryzias_latipes
ENSCPBG00000026346	-	100	78.445	ENSORLG00020020966	isy1	100	78.445	Oryzias_latipes_hni
ENSCPBG00000026346	-	100	78.445	ENSORLG00015017316	isy1	100	78.445	Oryzias_latipes_hsok
ENSCPBG00000026346	-	99	78.169	ENSOMEG00000023905	isy1	100	78.169	Oryzias_melastigma
ENSCPBG00000026346	-	99	89.753	ENSOGAG00000005142	-	99	90.106	Otolemur_garnettii
ENSCPBG00000026346	-	99	85.512	ENSOARG00000003231	-	94	85.866	Ovis_aries
ENSCPBG00000026346	-	99	88.732	ENSPPAG00000042141	-	99	89.085	Pan_paniscus
ENSCPBG00000026346	-	99	89.789	ENSPPRG00000003480	-	99	90.141	Panthera_pardus
ENSCPBG00000026346	-	99	89.789	ENSPTIG00000017919	-	99	90.141	Panthera_tigris_altaica
ENSCPBG00000026346	-	99	82.026	ENSPTRG00000015367	ISY1	99	82.353	Pan_troglodytes
ENSCPBG00000026346	-	99	89.789	ENSPANG00000004750	-	99	90.141	Papio_anubis
ENSCPBG00000026346	-	100	87.676	ENSPKIG00000024592	isy1	100	87.676	Paramormyrops_kingsleyae
ENSCPBG00000026346	-	100	98.227	ENSPSIG00000009384	-	100	98.227	Pelodiscus_sinensis
ENSCPBG00000026346	-	97	68.382	ENSPMGG00000016328	isy1	88	68.015	Periophthalmus_magnuspinnatus
ENSCPBG00000026346	-	99	89.437	ENSPEMG00000005390	Isy1	99	89.789	Peromyscus_maniculatus_bairdii
ENSCPBG00000026346	-	63	86.592	ENSPMAG00000005010	-	99	86.592	Petromyzon_marinus
ENSCPBG00000026346	-	100	96.099	ENSPCIG00000000466	-	74	96.099	Phascolarctos_cinereus
ENSCPBG00000026346	-	63	68.362	ENSPFOG00000010228	isy1	100	68.362	Poecilia_formosa
ENSCPBG00000026346	-	98	70.652	ENSPREG00000015121	isy1	99	71.014	Poecilia_reticulata
ENSCPBG00000026346	-	99	89.437	ENSPPYG00000013424	-	99	89.789	Pongo_abelii
ENSCPBG00000026346	-	99	80.656	ENSPCAG00000009535	-	99	80.984	Procavia_capensis
ENSCPBG00000026346	-	72	98.413	ENSPCOG00000025242	-	99	98.413	Propithecus_coquereli
ENSCPBG00000026346	-	100	86.667	ENSPNAG00000000703	isy1	100	87.719	Pygocentrus_nattereri
ENSCPBG00000026346	-	99	90.106	ENSRNOG00000010021	Isy1	99	90.459	Rattus_norvegicus
ENSCPBG00000026346	-	99	75.704	ENSRBIG00000028747	ISY1	99	76.056	Rhinopithecus_bieti
ENSCPBG00000026346	-	99	89.437	ENSRROG00000032314	ISY1	99	89.789	Rhinopithecus_roxellana
ENSCPBG00000026346	-	99	89.085	ENSSBOG00000029301	-	99	89.437	Saimiri_boliviensis_boliviensis
ENSCPBG00000026346	-	100	96.454	ENSSHAG00000017192	-	100	96.454	Sarcophilus_harrisii
ENSCPBG00000026346	-	100	87.108	ENSSFOG00015001127	isy1	100	87.108	Scleropages_formosus
ENSCPBG00000026346	-	100	82.042	ENSSMAG00000006601	isy1	100	82.042	Scophthalmus_maximus
ENSCPBG00000026346	-	100	81.979	ENSSDUG00000018291	isy1	100	81.979	Seriola_dumerili
ENSCPBG00000026346	-	100	81.625	ENSSLDG00000022252	isy1	100	81.625	Seriola_lalandi_dorsalis
ENSCPBG00000026346	-	64	68.852	ENSSARG00000007648	-	67	68.852	Sorex_araneus
ENSCPBG00000026346	-	100	97.518	ENSSPUG00000018050	-	100	97.518	Sphenodon_punctatus
ENSCPBG00000026346	-	68	82.990	ENSSPAG00000021900	isy1	69	86.486	Stegastes_partitus
ENSCPBG00000026346	-	99	90.106	ENSSSCG00000038900	-	99	90.459	Sus_scrofa
ENSCPBG00000026346	-	78	89.041	ENSTGUG00000003998	-	99	89.041	Taeniopygia_guttata
ENSCPBG00000026346	-	83	90.129	ENSTGUG00000007076	-	93	92.166	Taeniopygia_guttata
ENSCPBG00000026346	-	66	86.559	ENSTRUG00000002546	isy1	99	86.559	Takifugu_rubripes
ENSCPBG00000026346	-	100	76.655	ENSTNIG00000005224	isy1	100	76.655	Tetraodon_nigroviridis
ENSCPBG00000026346	-	77	72.727	ENSTBEG00000006938	-	100	72.727	Tupaia_belangeri
ENSCPBG00000026346	-	99	86.833	ENSTTRG00000015267	-	99	86.833	Tursiops_truncatus
ENSCPBG00000026346	-	99	89.789	ENSVVUG00000018261	-	99	90.141	Vulpes_vulpes
ENSCPBG00000026346	-	100	78.369	ENSXMAG00000012452	isy1	100	77.660	Xiphophorus_maculatus