EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026463 (Gene tree)
Gene ID: 112059889
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chrKK082966.1:1803453-1803713
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038262	LSM	PF01423.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044849	-	261	-	ENSCPBP00000038262	86 (aa)	XP_023963024	UPI000CE63946

Gene Model

Click here to download ENSCPBG00000026463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026463	-	77	69.697	ENSCPBG00000021923	-	82	69.697
ENSCPBG00000026463	-	100	79.070	ENSCPBG00000001985	-	100	79.070
ENSCPBG00000026463	-	87	84.000	ENSCPBG00000006227	-	100	82.558
ENSCPBG00000026463	-	78	46.269	ENSCPBG00000027472	LSM6	71	46.269
ENSCPBG00000026463	-	50	93.023	ENSCPBG00000001948	-	83	93.023
ENSCPBG00000026463	-	99	84.706	ENSCPBG00000024287	-	67	84.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026463	-	87	90.667	ENSG00000139343	SNRPF	100	89.535	Homo_sapiens
ENSCPBG00000026463	-	86	87.838	ENSAPOG00000003377	snrpf	66	87.059	Acanthochromis_polyacanthus
ENSCPBG00000026463	-	86	90.541	ENSAMEG00000002166	-	100	89.412	Ailuropoda_melanoleuca
ENSCPBG00000026463	-	88	77.632	ENSAMEG00000018718	-	100	77.907	Ailuropoda_melanoleuca
ENSCPBG00000026463	-	85	87.671	ENSACIG00000013216	snrpf	99	86.905	Amphilophus_citrinellus
ENSCPBG00000026463	-	85	87.671	ENSAOCG00000015108	snrpf	99	86.905	Amphiprion_ocellaris
ENSCPBG00000026463	-	85	87.671	ENSAPEG00000022022	snrpf	99	86.905	Amphiprion_percula
ENSCPBG00000026463	-	85	87.671	ENSATEG00000022625	snrpf	90	86.905	Anabas_testudineus
ENSCPBG00000026463	-	86	89.189	ENSACAG00000014073	SNRPF	98	88.235	Anolis_carolinensis
ENSCPBG00000026463	-	87	66.667	ENSANAG00000025860	-	100	67.442	Aotus_nancymaae
ENSCPBG00000026463	-	83	83.099	ENSANAG00000020297	-	75	82.927	Aotus_nancymaae
ENSCPBG00000026463	-	87	90.667	ENSANAG00000032845	SNRPF	100	89.535	Aotus_nancymaae
ENSCPBG00000026463	-	85	87.671	ENSACLG00000016066	snrpf	99	86.905	Astatotilapia_calliptera
ENSCPBG00000026463	-	87	86.667	ENSAMXG00000007421	snrpf	100	86.047	Astyanax_mexicanus
ENSCPBG00000026463	-	87	90.667	ENSBTAG00000016271	SNRPF	100	89.535	Bos_taurus
ENSCPBG00000026463	-	91	85.897	ENSBTAG00000050012	-	96	85.897	Bos_taurus
ENSCPBG00000026463	-	87	68.000	WBGene00004918	snr-5	88	68.000	Caenorhabditis_elegans
ENSCPBG00000026463	-	87	90.667	ENSCJAG00000002705	-	100	89.535	Callithrix_jacchus
ENSCPBG00000026463	-	85	82.192	ENSCAFG00000031151	-	100	81.395	Canis_familiaris
ENSCPBG00000026463	-	87	90.667	ENSCAFG00000006395	-	77	89.535	Canis_familiaris
ENSCPBG00000026463	-	85	82.192	ENSCAFG00020010823	-	100	81.395	Canis_lupus_dingo
ENSCPBG00000026463	-	91	82.051	ENSCAFG00020013161	-	83	82.051	Canis_lupus_dingo
ENSCPBG00000026463	-	94	83.951	ENSTSYG00000031636	-	68	83.951	Carlito_syrichta
ENSCPBG00000026463	-	87	84.211	ENSTSYG00000036502	-	100	83.908	Carlito_syrichta
ENSCPBG00000026463	-	87	81.333	ENSTSYG00000030635	-	100	81.395	Carlito_syrichta
ENSCPBG00000026463	-	86	90.541	ENSCAPG00000007242	SNRPF	100	89.412	Cavia_aperea
ENSCPBG00000026463	-	87	90.667	ENSCPOG00000013898	SNRPF	100	89.535	Cavia_porcellus
ENSCPBG00000026463	-	100	81.395	ENSCCAG00000033627	-	68	81.395	Cebus_capucinus
ENSCPBG00000026463	-	100	88.372	ENSCCAG00000017356	-	100	88.372	Cebus_capucinus
ENSCPBG00000026463	-	87	90.667	ENSCCAG00000037378	-	100	89.535	Cebus_capucinus
ENSCPBG00000026463	-	87	90.667	ENSCLAG00000007200	SNRPF	100	89.535	Chinchilla_lanigera
ENSCPBG00000026463	-	87	90.667	ENSCSAG00000003602	-	70	89.535	Chlorocebus_sabaeus
ENSCPBG00000026463	-	74	90.625	ENSCHOG00000009392	SNRPF	100	90.625	Choloepus_hoffmanni
ENSCPBG00000026463	-	99	76.471	ENSCSAVG00000007498	-	97	76.471	Ciona_savignyi
ENSCPBG00000026463	-	87	85.333	ENSCGRG00001008965	-	67	84.884	Cricetulus_griseus_chok1gshd
ENSCPBG00000026463	-	87	90.667	ENSCGRG00001017100	-	100	89.535	Cricetulus_griseus_chok1gshd
ENSCPBG00000026463	-	87	90.667	ENSCGRG00000000336	-	100	89.535	Cricetulus_griseus_crigri
ENSCPBG00000026463	-	93	83.750	ENSCGRG00000018878	-	100	83.750	Cricetulus_griseus_crigri
ENSCPBG00000026463	-	87	88.000	ENSCSEG00000004748	snrpf	100	87.209	Cynoglossus_semilaevis
ENSCPBG00000026463	-	86	87.838	ENSCVAG00000000397	snrpf	67	87.059	Cyprinodon_variegatus
ENSCPBG00000026463	-	87	85.714	ENSDARG00000105037	snrpf	100	85.227	Danio_rerio
ENSCPBG00000026463	-	87	89.333	ENSDNOG00000048989	-	77	88.372	Dasypus_novemcinctus
ENSCPBG00000026463	-	87	74.667	ENSDNOG00000049373	-	75	73.256	Dasypus_novemcinctus
ENSCPBG00000026463	-	87	90.667	ENSDNOG00000043775	-	55	89.535	Dasypus_novemcinctus
ENSCPBG00000026463	-	85	76.712	ENSDORG00000029740	-	100	77.381	Dipodomys_ordii
ENSCPBG00000026463	-	84	80.556	ENSDORG00000025351	-	100	80.556	Dipodomys_ordii
ENSCPBG00000026463	-	98	70.238	FBgn0000426	SmF	95	70.238	Drosophila_melanogaster
ENSCPBG00000026463	-	87	90.667	ENSETEG00000001558	-	100	89.535	Echinops_telfairi
ENSCPBG00000026463	-	94	69.136	ENSEBUG00000001793	-	85	69.136	Eptatretus_burgeri
ENSCPBG00000026463	-	87	90.667	ENSECAG00000019817	SNRPF	70	89.535	Equus_caballus
ENSCPBG00000026463	-	86	90.541	ENSEEUG00000013509	SNRPF	100	89.412	Erinaceus_europaeus
ENSCPBG00000026463	-	100	84.884	ENSELUG00000007737	RUXF	99	84.884	Esox_lucius
ENSCPBG00000026463	-	87	89.333	ENSELUG00000003121	RUXF	100	88.372	Esox_lucius
ENSCPBG00000026463	-	98	69.048	ENSFCAG00000031148	-	77	69.048	Felis_catus
ENSCPBG00000026463	-	87	90.667	ENSFCAG00000029966	-	100	89.535	Felis_catus
ENSCPBG00000026463	-	87	72.000	ENSFCAG00000021942	-	100	73.256	Felis_catus
ENSCPBG00000026463	-	86	90.541	ENSFALG00000010799	SNRPF	99	89.412	Ficedula_albicollis
ENSCPBG00000026463	-	87	90.667	ENSFDAG00000002831	-	100	89.535	Fukomys_damarensis
ENSCPBG00000026463	-	86	87.838	ENSFHEG00000003240	snrpf	75	87.059	Fundulus_heteroclitus
ENSCPBG00000026463	-	86	87.838	ENSGMOG00000007741	snrpf	100	87.059	Gadus_morhua
ENSCPBG00000026463	-	87	90.667	ENSGALG00000011409	SNRPF	100	89.535	Gallus_gallus
ENSCPBG00000026463	-	85	87.671	ENSGAFG00000016187	snrpf	97	86.905	Gambusia_affinis
ENSCPBG00000026463	-	86	87.838	ENSGACG00000020055	snrpf	100	87.059	Gasterosteus_aculeatus
ENSCPBG00000026463	-	78	86.567	ENSGAGG00000014132	-	96	78.750	Gopherus_agassizii
ENSCPBG00000026463	-	72	88.710	ENSGAGG00000020974	-	52	88.710	Gopherus_agassizii
ENSCPBG00000026463	-	86	83.784	ENSGAGG00000012945	-	77	82.558	Gopherus_agassizii
ENSCPBG00000026463	-	70	80.000	ENSGAGG00000011163	-	100	80.000	Gopherus_agassizii
ENSCPBG00000026463	-	91	85.897	ENSGAGG00000022991	-	88	85.897	Gopherus_agassizii
ENSCPBG00000026463	-	87	90.667	ENSGGOG00000001127	-	100	89.535	Gorilla_gorilla
ENSCPBG00000026463	-	92	65.823	ENSGGOG00000039564	-	96	65.823	Gorilla_gorilla
ENSCPBG00000026463	-	98	70.238	ENSGGOG00000039936	-	95	70.238	Gorilla_gorilla
ENSCPBG00000026463	-	87	90.667	ENSHGLG00000009108	SNRPF	100	89.535	Heterocephalus_glaber_female
ENSCPBG00000026463	-	87	89.333	ENSHGLG00000021172	-	100	88.372	Heterocephalus_glaber_female
ENSCPBG00000026463	-	86	90.541	ENSHGLG00100008103	-	100	89.412	Heterocephalus_glaber_male
ENSCPBG00000026463	-	87	89.333	ENSHGLG00100019596	-	100	88.372	Heterocephalus_glaber_male
ENSCPBG00000026463	-	73	77.143	ENSHCOG00000018663	snrpf	55	77.143	Hippocampus_comes
ENSCPBG00000026463	-	87	88.000	ENSIPUG00000018994	snrpf	100	87.209	Ictalurus_punctatus
ENSCPBG00000026463	-	87	90.667	ENSSTOG00000010434	-	100	89.535	Ictidomys_tridecemlineatus
ENSCPBG00000026463	-	100	79.070	ENSJJAG00000010502	-	100	79.070	Jaculus_jaculus
ENSCPBG00000026463	-	87	90.667	ENSJJAG00000011272	-	100	89.535	Jaculus_jaculus
ENSCPBG00000026463	-	78	85.075	ENSJJAG00000004828	-	100	85.075	Jaculus_jaculus
ENSCPBG00000026463	-	100	73.256	ENSJJAG00000004558	-	100	73.256	Jaculus_jaculus
ENSCPBG00000026463	-	87	86.667	ENSKMAG00000013566	snrpf	100	86.047	Kryptolebias_marmoratus
ENSCPBG00000026463	-	87	86.667	ENSLBEG00000008800	snrpf	100	86.047	Labrus_bergylta
ENSCPBG00000026463	-	87	89.333	ENSLACG00000002456	-	74	88.372	Latimeria_chalumnae
ENSCPBG00000026463	-	87	86.667	ENSLOCG00000015744	snrpf	100	86.047	Lepisosteus_oculatus
ENSCPBG00000026463	-	86	90.541	ENSLAFG00000017426	SNRPF	99	89.412	Loxodonta_africana
ENSCPBG00000026463	-	85	86.301	ENSMAMG00000016593	snrpf	99	85.714	Mastacembelus_armatus
ENSCPBG00000026463	-	85	87.671	ENSMZEG00005014701	snrpf	99	86.905	Maylandia_zebra
ENSCPBG00000026463	-	85	90.411	ENSMGAG00000011453	-	76	89.286	Meleagris_gallopavo
ENSCPBG00000026463	-	87	85.333	ENSMAUG00000008799	-	100	84.884	Mesocricetus_auratus
ENSCPBG00000026463	-	73	90.476	ENSMAUG00000016909	-	100	89.189	Mesocricetus_auratus
ENSCPBG00000026463	-	71	85.246	ENSMAUG00000010289	-	76	85.246	Mesocricetus_auratus
ENSCPBG00000026463	-	73	90.476	ENSMAUG00000019737	-	100	89.189	Mesocricetus_auratus
ENSCPBG00000026463	-	87	84.000	ENSMICG00000030494	-	69	83.721	Microcebus_murinus
ENSCPBG00000026463	-	87	90.667	ENSMICG00000012153	-	100	89.535	Microcebus_murinus
ENSCPBG00000026463	-	87	76.000	ENSMOCG00000022166	-	90	75.904	Microtus_ochrogaster
ENSCPBG00000026463	-	87	90.667	ENSMOCG00000020437	Snrpf	100	89.535	Microtus_ochrogaster
ENSCPBG00000026463	-	78	79.104	ENSMOCG00000020220	-	99	79.487	Microtus_ochrogaster
ENSCPBG00000026463	-	86	86.486	ENSMMOG00000007127	snrpf	100	85.882	Mola_mola
ENSCPBG00000026463	-	87	90.667	ENSMODG00000008091	SNRPF	75	89.535	Monodelphis_domestica
ENSCPBG00000026463	-	85	87.671	ENSMALG00000012328	snrpf	99	86.905	Monopterus_albus
ENSCPBG00000026463	-	87	90.667	MGP_CAROLIEiJ_G0015735	-	100	89.535	Mus_caroli
ENSCPBG00000026463	-	87	90.667	ENSMUSG00000020018	Snrpf	100	89.535	Mus_musculus
ENSCPBG00000026463	-	87	90.667	MGP_PahariEiJ_G0031350	Snrpf	100	89.535	Mus_pahari
ENSCPBG00000026463	-	87	90.667	MGP_SPRETEiJ_G0016553	Snrpf	100	89.535	Mus_spretus
ENSCPBG00000026463	-	87	90.667	ENSMPUG00000007176	-	77	89.535	Mustela_putorius_furo
ENSCPBG00000026463	-	87	90.667	ENSMLUG00000027932	-	81	89.535	Myotis_lucifugus
ENSCPBG00000026463	-	100	70.930	ENSMLUG00000026269	-	81	70.930	Myotis_lucifugus
ENSCPBG00000026463	-	87	90.667	ENSMLUG00000026149	-	81	89.535	Myotis_lucifugus
ENSCPBG00000026463	-	87	90.667	ENSMLUG00000029201	-	81	89.535	Myotis_lucifugus
ENSCPBG00000026463	-	86	90.541	ENSMLUG00000013577	-	100	89.412	Myotis_lucifugus
ENSCPBG00000026463	-	87	90.667	ENSNGAG00000024292	-	100	89.535	Nannospalax_galili
ENSCPBG00000026463	-	73	79.365	ENSNGAG00000005851	-	74	79.365	Nannospalax_galili
ENSCPBG00000026463	-	86	87.838	ENSNBRG00000011682	snrpf	87	87.059	Neolamprologus_brichardi
ENSCPBG00000026463	-	86	64.865	ENSMEUG00000000671	SNRPF	100	67.059	Notamacropus_eugenii
ENSCPBG00000026463	-	87	90.667	ENSODEG00000010328	-	100	89.535	Octodon_degus
ENSCPBG00000026463	-	87	89.333	ENSOCUG00000010925	SNRPF	76	88.372	Oryctolagus_cuniculus
ENSCPBG00000026463	-	86	86.486	ENSORLG00020008216	snrpf	100	85.882	Oryzias_latipes_hni
ENSCPBG00000026463	-	86	86.486	ENSORLG00015007418	snrpf	100	85.882	Oryzias_latipes_hsok
ENSCPBG00000026463	-	85	87.671	ENSOMEG00000003018	snrpf	99	86.905	Oryzias_melastigma
ENSCPBG00000026463	-	87	89.333	ENSOGAG00000030323	-	100	87.209	Otolemur_garnettii
ENSCPBG00000026463	-	87	90.667	ENSOARG00000011853	-	75	89.535	Ovis_aries
ENSCPBG00000026463	-	92	65.823	ENSPPAG00000037479	-	96	65.823	Pan_paniscus
ENSCPBG00000026463	-	98	71.429	ENSPPAG00000037544	-	95	71.429	Pan_paniscus
ENSCPBG00000026463	-	87	90.667	ENSPPRG00000005875	-	100	89.535	Panthera_pardus
ENSCPBG00000026463	-	98	67.857	ENSPPRG00000007449	-	86	67.857	Panthera_pardus
ENSCPBG00000026463	-	98	70.238	ENSPTIG00000005117	-	100	70.238	Panthera_tigris_altaica
ENSCPBG00000026463	-	87	90.667	ENSPTIG00000007520	SNRPF	100	89.535	Panthera_tigris_altaica
ENSCPBG00000026463	-	98	71.429	ENSPTRG00000043814	-	95	71.429	Pan_troglodytes
ENSCPBG00000026463	-	92	65.823	ENSPTRG00000047717	-	96	65.823	Pan_troglodytes
ENSCPBG00000026463	-	86	87.838	ENSPKIG00000014784	snrpf	93	87.059	Paramormyrops_kingsleyae
ENSCPBG00000026463	-	86	90.541	ENSPSIG00000016462	SNRPF	99	89.412	Pelodiscus_sinensis
ENSCPBG00000026463	-	86	86.486	ENSPMGG00000023548	snrpf	100	85.882	Periophthalmus_magnuspinnatus
ENSCPBG00000026463	-	87	90.667	ENSPEMG00000023326	Snrpf	100	89.535	Peromyscus_maniculatus_bairdii
ENSCPBG00000026463	-	85	87.671	ENSPLAG00000023932	snrpf	99	86.905	Poecilia_latipinna
ENSCPBG00000026463	-	85	87.671	ENSPMEG00000003377	snrpf	99	86.905	Poecilia_mexicana
ENSCPBG00000026463	-	85	87.671	ENSPREG00000022635	snrpf	97	86.905	Poecilia_reticulata
ENSCPBG00000026463	-	87	90.667	ENSPPYG00000004847	-	100	89.535	Pongo_abelii
ENSCPBG00000026463	-	87	90.667	ENSPCOG00000023833	-	100	89.535	Propithecus_coquereli
ENSCPBG00000026463	-	87	90.667	ENSPVAG00000009036	SNRPF	100	89.535	Pteropus_vampyrus
ENSCPBG00000026463	-	85	87.671	ENSPNYG00000021712	snrpf	99	86.905	Pundamilia_nyererei
ENSCPBG00000026463	-	85	87.671	ENSPNAG00000019117	snrpf	99	86.905	Pygocentrus_nattereri
ENSCPBG00000026463	-	87	90.667	ENSRNOG00000005556	Snrpf	100	89.535	Rattus_norvegicus
ENSCPBG00000026463	-	87	88.000	ENSRBIG00000030414	-	100	86.047	Rhinopithecus_bieti
ENSCPBG00000026463	-	87	88.000	ENSRROG00000021975	-	100	86.047	Rhinopithecus_roxellana
ENSCPBG00000026463	-	81	54.930	YPR182W	SMX3	83	54.930	Saccharomyces_cerevisiae
ENSCPBG00000026463	-	87	70.513	ENSSBOG00000027638	-	100	71.910	Saimiri_boliviensis_boliviensis
ENSCPBG00000026463	-	87	90.667	ENSSBOG00000012868	-	100	88.372	Saimiri_boliviensis_boliviensis
ENSCPBG00000026463	-	87	90.667	ENSSBOG00000036179	-	100	89.535	Saimiri_boliviensis_boliviensis
ENSCPBG00000026463	-	87	78.667	ENSSBOG00000032297	-	100	77.907	Saimiri_boliviensis_boliviensis
ENSCPBG00000026463	-	86	90.541	ENSSHAG00000012294	SNRPF	77	89.412	Sarcophilus_harrisii
ENSCPBG00000026463	-	74	87.500	ENSSFOG00015021523	snrpf	96	87.500	Scleropages_formosus
ENSCPBG00000026463	-	87	86.667	ENSSMAG00000005533	snrpf	99	86.047	Scophthalmus_maximus
ENSCPBG00000026463	-	76	87.692	ENSSDUG00000016283	snrpf	77	87.692	Seriola_dumerili
ENSCPBG00000026463	-	93	67.500	ENSSLDG00000003885	-	98	67.500	Seriola_lalandi_dorsalis
ENSCPBG00000026463	-	87	86.667	ENSSLDG00000005119	snrpf	100	86.047	Seriola_lalandi_dorsalis
ENSCPBG00000026463	-	85	90.411	ENSSPUG00000014590	-	99	89.286	Sphenodon_punctatus
ENSCPBG00000026463	-	86	87.838	ENSSPAG00000003283	snrpf	97	87.059	Stegastes_partitus
ENSCPBG00000026463	-	87	90.667	ENSSSCG00000000895	SNRPF	100	89.535	Sus_scrofa
ENSCPBG00000026463	-	67	84.483	ENSTRUG00000014956	snrpf	100	84.058	Takifugu_rubripes
ENSCPBG00000026463	-	87	86.667	ENSTNIG00000012672	snrpf	100	86.047	Tetraodon_nigroviridis
ENSCPBG00000026463	-	87	65.333	ENSTTRG00000006070	SNRPF	100	67.442	Tursiops_truncatus
ENSCPBG00000026463	-	87	90.667	ENSUAMG00000008176	-	100	89.535	Ursus_americanus
ENSCPBG00000026463	-	100	77.907	ENSUAMG00000001101	-	100	77.907	Ursus_americanus
ENSCPBG00000026463	-	87	90.667	ENSUMAG00000003528	-	100	89.535	Ursus_maritimus
ENSCPBG00000026463	-	87	80.000	ENSUMAG00000006177	-	100	76.744	Ursus_maritimus
ENSCPBG00000026463	-	87	90.667	ENSVPAG00000008712	-	100	89.535	Vicugna_pacos
ENSCPBG00000026463	-	91	84.615	ENSVVUG00000023821	-	100	84.615	Vulpes_vulpes
ENSCPBG00000026463	-	86	67.105	ENSXETG00000021630	snrpf	100	68.966	Xenopus_tropicalis
ENSCPBG00000026463	-	85	87.671	ENSXCOG00000013860	snrpf	97	86.905	Xiphophorus_couchianus
ENSCPBG00000026463	-	85	87.671	ENSXMAG00000015448	snrpf	99	86.905	Xiphophorus_maculatus