EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026464 (Gene tree)
Gene ID: 101931295
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 34591 bases
Position: chrKK082966.1:1830876-1865466
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038263	DND1_DSRM	PF14709.7	4.3e-25	1	1
ENSCPBP00000038263	RRM_1	PF00076.22	1.6e-40	1	3
ENSCPBP00000038263	RRM_1	PF00076.22	1.6e-40	2	3
ENSCPBP00000038263	RRM_1	PF00076.22	1.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000044850	A1CF-201	1773	-	ENSCPBP00000038263	590 (aa)	XP_005292540	UPI0003891603

Gene Model

Click here to download ENSCPBG00000026464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026464	A1CF	81	71.475	ENSCPBG00000009314	RBM46	81	71.475
ENSCPBG00000026464	A1CF	75	58.370	ENSCPBG00000013831	RBM47	72	58.370
ENSCPBG00000026464	A1CF	50	53.691	ENSCPBG00000019850	SYNCRIP	57	50.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026464	A1CF	100	88.403	ENSG00000148584	A1CF	100	94.527	Homo_sapiens
ENSCPBG00000026464	A1CF	100	73.378	ENSAPOG00000008259	a1cf	100	73.710	Acanthochromis_polyacanthus
ENSCPBG00000026464	A1CF	100	87.521	ENSAMEG00000000523	A1CF	100	88.027	Ailuropoda_melanoleuca
ENSCPBG00000026464	A1CF	100	74.878	ENSACIG00000008632	a1cf	100	76.183	Amphilophus_citrinellus
ENSCPBG00000026464	A1CF	100	74.056	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSCPBG00000026464	A1CF	100	75.041	ENSAPEG00000009537	a1cf	100	76.190	Amphiprion_percula
ENSCPBG00000026464	A1CF	100	76.384	ENSATEG00000013720	a1cf	100	77.850	Anabas_testudineus
ENSCPBG00000026464	A1CF	100	93.220	ENSAPLG00000002964	A1CF	100	93.220	Anas_platyrhynchos
ENSCPBG00000026464	A1CF	100	86.610	ENSACAG00000015269	A1CF	100	86.610	Anolis_carolinensis
ENSCPBG00000026464	A1CF	100	87.919	ENSANAG00000019974	A1CF	100	87.899	Aotus_nancymaae
ENSCPBG00000026464	A1CF	100	73.762	ENSACLG00000017428	a1cf	100	75.743	Astatotilapia_calliptera
ENSCPBG00000026464	A1CF	100	74.545	ENSAMXG00000018180	a1cf	100	74.545	Astyanax_mexicanus
ENSCPBG00000026464	A1CF	100	87.081	ENSBTAG00000021195	A1CF	100	88.665	Bos_taurus
ENSCPBG00000026464	A1CF	100	88.926	ENSCJAG00000005045	A1CF	100	88.908	Callithrix_jacchus
ENSCPBG00000026464	A1CF	100	88.176	ENSCAFG00000015581	A1CF	100	88.682	Canis_familiaris
ENSCPBG00000026464	A1CF	100	88.176	ENSCAFG00020026421	A1CF	100	88.682	Canis_lupus_dingo
ENSCPBG00000026464	A1CF	100	88.591	ENSCHIG00000020411	A1CF	100	88.591	Capra_hircus
ENSCPBG00000026464	A1CF	95	88.078	ENSTSYG00000001755	A1CF	100	87.143	Carlito_syrichta
ENSCPBG00000026464	A1CF	100	79.321	ENSCAPG00000017386	A1CF	100	79.012	Cavia_aperea
ENSCPBG00000026464	A1CF	100	87.899	ENSCPOG00000009807	A1CF	100	88.067	Cavia_porcellus
ENSCPBG00000026464	A1CF	100	89.226	ENSCCAG00000018168	A1CF	100	89.226	Cebus_capucinus
ENSCPBG00000026464	A1CF	100	87.352	ENSCATG00000043715	A1CF	100	87.858	Cercocebus_atys
ENSCPBG00000026464	A1CF	100	87.270	ENSCLAG00000010424	A1CF	100	87.270	Chinchilla_lanigera
ENSCPBG00000026464	A1CF	100	89.207	ENSCSAG00000007032	A1CF	100	89.713	Chlorocebus_sabaeus
ENSCPBG00000026464	A1CF	98	82.492	ENSCHOG00000009089	A1CF	99	82.997	Choloepus_hoffmanni
ENSCPBG00000026464	A1CF	100	88.870	ENSCANG00000038032	A1CF	100	89.376	Colobus_angolensis_palliatus
ENSCPBG00000026464	A1CF	100	86.745	ENSCGRG00001017413	A1cf	100	86.913	Cricetulus_griseus_chok1gshd
ENSCPBG00000026464	A1CF	100	86.577	ENSCGRG00000017332	A1cf	100	86.577	Cricetulus_griseus_crigri
ENSCPBG00000026464	A1CF	100	76.119	ENSCSEG00000002361	a1cf	100	77.944	Cynoglossus_semilaevis
ENSCPBG00000026464	A1CF	100	74.430	ENSCVAG00000010520	a1cf	100	76.221	Cyprinodon_variegatus
ENSCPBG00000026464	A1CF	100	78.428	ENSDARG00000002968	a1cf	100	79.766	Danio_rerio
ENSCPBG00000026464	A1CF	100	87.584	ENSDNOG00000002829	A1CF	100	87.752	Dasypus_novemcinctus
ENSCPBG00000026464	A1CF	81	90.580	ENSETEG00000012527	A1CF	81	90.580	Echinops_telfairi
ENSCPBG00000026464	A1CF	100	88.294	ENSEASG00005012924	A1CF	100	88.462	Equus_asinus_asinus
ENSCPBG00000026464	A1CF	100	87.960	ENSECAG00000010424	A1CF	100	88.127	Equus_caballus
ENSCPBG00000026464	A1CF	78	75.803	ENSEEUG00000000013	A1CF	100	75.803	Erinaceus_europaeus
ENSCPBG00000026464	A1CF	100	80.504	ENSELUG00000003159	a1cf	100	80.504	Esox_lucius
ENSCPBG00000026464	A1CF	100	85.835	ENSFCAG00000011179	A1CF	100	86.172	Felis_catus
ENSCPBG00000026464	A1CF	100	90.000	ENSFALG00000013183	A1CF	100	90.000	Ficedula_albicollis
ENSCPBG00000026464	A1CF	100	86.074	ENSFDAG00000019371	A1CF	100	86.242	Fukomys_damarensis
ENSCPBG00000026464	A1CF	100	68.893	ENSFHEG00000019652	a1cf	96	84.375	Fundulus_heteroclitus
ENSCPBG00000026464	A1CF	100	72.231	ENSGMOG00000018943	a1cf	100	72.231	Gadus_morhua
ENSCPBG00000026464	A1CF	95	92.844	ENSGALG00000003765	A1CF	97	92.844	Gallus_gallus
ENSCPBG00000026464	A1CF	100	70.724	ENSGAFG00000014868	a1cf	100	71.217	Gambusia_affinis
ENSCPBG00000026464	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	74.836	Gasterosteus_aculeatus
ENSCPBG00000026464	A1CF	94	99.102	ENSGAGG00000016508	A1CF	97	99.102	Gopherus_agassizii
ENSCPBG00000026464	A1CF	100	88.235	ENSGGOG00000009670	A1CF	100	88.403	Gorilla_gorilla
ENSCPBG00000026464	A1CF	100	74.878	ENSHBUG00000021959	a1cf	100	76.835	Haplochromis_burtoni
ENSCPBG00000026464	A1CF	100	87.752	ENSHGLG00000008955	A1CF	100	88.087	Heterocephalus_glaber_female
ENSCPBG00000026464	A1CF	100	87.248	ENSHGLG00100000518	A1CF	100	87.584	Heterocephalus_glaber_male
ENSCPBG00000026464	A1CF	95	72.414	ENSHCOG00000017669	a1cf	100	73.083	Hippocampus_comes
ENSCPBG00000026464	A1CF	90	82.309	ENSIPUG00000010367	a1cf	99	80.431	Ictalurus_punctatus
ENSCPBG00000026464	A1CF	100	76.911	ENSKMAG00000006568	a1cf	100	78.049	Kryptolebias_marmoratus
ENSCPBG00000026464	A1CF	99	75.777	ENSLBEG00000020994	a1cf	99	77.414	Labrus_bergylta
ENSCPBG00000026464	A1CF	100	83.474	ENSLACG00000008061	A1CF	100	83.474	Latimeria_chalumnae
ENSCPBG00000026464	A1CF	100	83.670	ENSLOCG00000006302	a1cf	100	83.838	Lepisosteus_oculatus
ENSCPBG00000026464	A1CF	100	88.591	ENSLAFG00000015462	A1CF	100	88.758	Loxodonta_africana
ENSCPBG00000026464	A1CF	100	87.521	ENSMFAG00000035948	A1CF	100	88.027	Macaca_fascicularis
ENSCPBG00000026464	A1CF	100	87.521	ENSMMUG00000007077	A1CF	100	88.027	Macaca_mulatta
ENSCPBG00000026464	A1CF	100	87.352	ENSMNEG00000031454	A1CF	99	89.127	Macaca_nemestrina
ENSCPBG00000026464	A1CF	100	88.702	ENSMLEG00000037223	A1CF	100	89.207	Mandrillus_leucophaeus
ENSCPBG00000026464	A1CF	100	72.995	ENSMAMG00000010402	a1cf	100	75.614	Mastacembelus_armatus
ENSCPBG00000026464	A1CF	100	78.020	ENSMZEG00005013245	a1cf	100	79.027	Maylandia_zebra
ENSCPBG00000026464	A1CF	100	92.724	ENSMGAG00000001507	A1CF	100	92.724	Meleagris_gallopavo
ENSCPBG00000026464	A1CF	100	85.738	ENSMAUG00000007422	A1cf	100	86.074	Mesocricetus_auratus
ENSCPBG00000026464	A1CF	100	86.311	ENSMICG00000003377	A1CF	100	86.477	Microcebus_murinus
ENSCPBG00000026464	A1CF	100	86.745	ENSMOCG00000021536	A1cf	100	86.913	Microtus_ochrogaster
ENSCPBG00000026464	A1CF	100	66.721	ENSMMOG00000009422	a1cf	100	68.525	Mola_mola
ENSCPBG00000026464	A1CF	92	88.440	ENSMODG00000016478	A1CF	99	88.440	Monodelphis_domestica
ENSCPBG00000026464	A1CF	100	73.445	ENSMALG00000012992	a1cf	100	73.445	Monopterus_albus
ENSCPBG00000026464	A1CF	100	86.409	MGP_CAROLIEiJ_G0022873	A1cf	100	86.577	Mus_caroli
ENSCPBG00000026464	A1CF	100	86.409	ENSMUSG00000052595	A1cf	99	90.789	Mus_musculus
ENSCPBG00000026464	A1CF	100	86.074	MGP_PahariEiJ_G0014366	A1cf	100	86.074	Mus_pahari
ENSCPBG00000026464	A1CF	100	86.409	MGP_SPRETEiJ_G0023792	A1cf	100	86.577	Mus_spretus
ENSCPBG00000026464	A1CF	100	81.956	ENSMPUG00000016971	A1CF	100	82.631	Mustela_putorius_furo
ENSCPBG00000026464	A1CF	100	87.081	ENSMLUG00000016071	A1CF	100	87.416	Myotis_lucifugus
ENSCPBG00000026464	A1CF	100	87.416	ENSNGAG00000015136	A1cf	100	87.752	Nannospalax_galili
ENSCPBG00000026464	A1CF	100	74.715	ENSNBRG00000001712	a1cf	100	76.672	Neolamprologus_brichardi
ENSCPBG00000026464	A1CF	100	88.591	ENSNLEG00000012028	A1CF	100	88.758	Nomascus_leucogenys
ENSCPBG00000026464	A1CF	94	89.247	ENSMEUG00000015909	A1CF	100	89.247	Notamacropus_eugenii
ENSCPBG00000026464	A1CF	89	79.468	ENSOPRG00000010667	A1CF	100	77.355	Ochotona_princeps
ENSCPBG00000026464	A1CF	100	75.530	ENSONIG00000019105	a1cf	100	76.672	Oreochromis_niloticus
ENSCPBG00000026464	A1CF	79	89.079	ENSOANG00000007360	A1CF	99	89.079	Ornithorhynchus_anatinus
ENSCPBG00000026464	A1CF	100	84.925	ENSOCUG00000011587	A1CF	100	85.092	Oryctolagus_cuniculus
ENSCPBG00000026464	A1CF	100	75.822	ENSORLG00000013342	a1cf	100	75.822	Oryzias_latipes
ENSCPBG00000026464	A1CF	100	76.268	ENSORLG00020000586	a1cf	100	77.087	Oryzias_latipes_hni
ENSCPBG00000026464	A1CF	100	76.268	ENSORLG00015018569	a1cf	100	77.087	Oryzias_latipes_hsok
ENSCPBG00000026464	A1CF	100	75.777	ENSOMEG00000013531	a1cf	100	75.777	Oryzias_melastigma
ENSCPBG00000026464	A1CF	100	88.702	ENSOGAG00000012884	A1CF	100	89.039	Otolemur_garnettii
ENSCPBG00000026464	A1CF	100	88.423	ENSOARG00000013695	A1CF	100	88.423	Ovis_aries
ENSCPBG00000026464	A1CF	97	86.828	ENSPPAG00000028115	A1CF	99	92.308	Pan_paniscus
ENSCPBG00000026464	A1CF	100	87.521	ENSPPRG00000012180	A1CF	100	87.858	Panthera_pardus
ENSCPBG00000026464	A1CF	100	87.521	ENSPTIG00000021223	A1CF	100	87.858	Panthera_tigris_altaica
ENSCPBG00000026464	A1CF	100	88.403	ENSPTRG00000002508	A1CF	100	88.571	Pan_troglodytes
ENSCPBG00000026464	A1CF	100	87.521	ENSPANG00000021988	A1CF	100	88.027	Papio_anubis
ENSCPBG00000026464	A1CF	100	80.402	ENSPKIG00000025176	a1cf	100	80.570	Paramormyrops_kingsleyae
ENSCPBG00000026464	A1CF	100	95.932	ENSPSIG00000010318	A1CF	100	95.932	Pelodiscus_sinensis
ENSCPBG00000026464	A1CF	98	66.781	ENSPMGG00000013359	a1cf	99	67.973	Periophthalmus_magnuspinnatus
ENSCPBG00000026464	A1CF	100	87.919	ENSPEMG00000015021	A1cf	100	87.919	Peromyscus_maniculatus_bairdii
ENSCPBG00000026464	A1CF	100	88.832	ENSPCIG00000002175	A1CF	100	88.832	Phascolarctos_cinereus
ENSCPBG00000026464	A1CF	100	76.059	ENSPFOG00000007437	-	100	77.850	Poecilia_formosa
ENSCPBG00000026464	A1CF	100	76.221	ENSPFOG00000006683	a1cf	100	78.013	Poecilia_formosa
ENSCPBG00000026464	A1CF	100	74.919	ENSPLAG00000000026	a1cf	100	76.710	Poecilia_latipinna
ENSCPBG00000026464	A1CF	100	74.919	ENSPLAG00000001210	-	100	76.710	Poecilia_latipinna
ENSCPBG00000026464	A1CF	100	68.137	ENSPMEG00000000921	a1cf	100	69.935	Poecilia_mexicana
ENSCPBG00000026464	A1CF	100	69.281	ENSPMEG00000015529	-	100	71.078	Poecilia_mexicana
ENSCPBG00000026464	A1CF	100	76.384	ENSPREG00000016298	a1cf	100	78.013	Poecilia_reticulata
ENSCPBG00000026464	A1CF	100	87.416	ENSPPYG00000002819	A1CF	100	87.584	Pongo_abelii
ENSCPBG00000026464	A1CF	79	67.230	ENSPCAG00000006463	A1CF	79	67.230	Procavia_capensis
ENSCPBG00000026464	A1CF	100	87.772	ENSPCOG00000024172	A1CF	100	87.940	Propithecus_coquereli
ENSCPBG00000026464	A1CF	100	76.020	ENSPNYG00000017944	a1cf	100	77.977	Pundamilia_nyererei
ENSCPBG00000026464	A1CF	100	78.974	ENSPNAG00000007704	a1cf	100	79.139	Pygocentrus_nattereri
ENSCPBG00000026464	A1CF	100	85.403	ENSRNOG00000033195	A1cf	100	85.570	Rattus_norvegicus
ENSCPBG00000026464	A1CF	100	82.857	ENSRBIG00000042892	A1CF	100	86.248	Rhinopithecus_bieti
ENSCPBG00000026464	A1CF	100	88.870	ENSRROG00000041398	A1CF	100	89.376	Rhinopithecus_roxellana
ENSCPBG00000026464	A1CF	100	88.777	ENSSBOG00000021930	A1CF	100	88.926	Saimiri_boliviensis_boliviensis
ENSCPBG00000026464	A1CF	100	89.376	ENSSHAG00000005096	A1CF	100	89.376	Sarcophilus_harrisii
ENSCPBG00000026464	A1CF	100	78.275	ENSSFOG00015011774	a1cf	100	78.607	Scleropages_formosus
ENSCPBG00000026464	A1CF	100	76.059	ENSSMAG00000013271	a1cf	100	76.710	Scophthalmus_maximus
ENSCPBG00000026464	A1CF	100	75.993	ENSSDUG00000013930	a1cf	100	77.152	Seriola_dumerili
ENSCPBG00000026464	A1CF	100	70.181	ENSSLDG00000004290	a1cf	100	70.511	Seriola_lalandi_dorsalis
ENSCPBG00000026464	A1CF	95	76.896	ENSSARG00000005940	A1CF	96	76.896	Sorex_araneus
ENSCPBG00000026464	A1CF	95	91.150	ENSSPUG00000006797	A1CF	95	91.150	Sphenodon_punctatus
ENSCPBG00000026464	A1CF	100	89.430	ENSSSCG00000010431	A1CF	100	89.430	Sus_scrofa
ENSCPBG00000026464	A1CF	100	90.301	ENSTGUG00000005090	A1CF	100	90.301	Taeniopygia_guttata
ENSCPBG00000026464	A1CF	100	75.367	ENSTRUG00000001982	a1cf	100	75.530	Takifugu_rubripes
ENSCPBG00000026464	A1CF	100	75.935	ENSTNIG00000003580	a1cf	100	76.585	Tetraodon_nigroviridis
ENSCPBG00000026464	A1CF	97	80.623	ENSTTRG00000013190	A1CF	95	80.623	Tursiops_truncatus
ENSCPBG00000026464	A1CF	100	86.341	ENSUAMG00000020065	A1CF	100	86.678	Ursus_americanus
ENSCPBG00000026464	A1CF	100	87.817	ENSUMAG00000011162	A1CF	100	88.156	Ursus_maritimus
ENSCPBG00000026464	A1CF	87	84.100	ENSVPAG00000006130	A1CF	86	84.100	Vicugna_pacos
ENSCPBG00000026464	A1CF	100	87.500	ENSVVUG00000002504	A1CF	99	88.645	Vulpes_vulpes
ENSCPBG00000026464	A1CF	100	80.672	ENSXETG00000006611	a1cf	100	80.672	Xenopus_tropicalis
ENSCPBG00000026464	A1CF	100	76.066	ENSXCOG00000003302	a1cf	100	77.377	Xiphophorus_couchianus
ENSCPBG00000026464	A1CF	100	77.213	ENSXMAG00000016703	a1cf	100	78.525	Xiphophorus_maculatus