EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026551 (Gene tree)
Gene ID: 101933895
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 84166 bases
Position: chrKK082967.1:364050-448215
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038433	rRNA_proc-arch	PF13234.6	4.9e-87	1	1
ENSCPBP00000038433	DEAD	PF00270.29	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045034	MTREX-201	3312	XM_005300847	ENSCPBP00000038433	1103 (aa)	XP_005300904	-

Gene Model

Click here to download ENSCPBG00000026551's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026551	MTREX	65	44.253	ENSCPBG00000000343	SKIV2L	68	42.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026551	MTREX	94	92.138	ENSG00000039123	MTREX	100	92.138	Homo_sapiens
ENSCPBG00000026551	MTREX	94	83.973	ENSAPOG00000007814	mtrex	100	83.766	Acanthochromis_polyacanthus
ENSCPBG00000026551	MTREX	94	92.625	ENSAMEG00000013856	MTREX	100	92.241	Ailuropoda_melanoleuca
ENSCPBG00000026551	MTREX	94	82.948	ENSACIG00000015117	mtrex	100	83.044	Amphilophus_citrinellus
ENSCPBG00000026551	MTREX	94	84.453	ENSAOCG00000011884	mtrex	100	83.668	Amphiprion_ocellaris
ENSCPBG00000026551	MTREX	94	83.958	ENSAPEG00000019384	mtrex	100	83.958	Amphiprion_percula
ENSCPBG00000026551	MTREX	94	84.423	ENSATEG00000015117	mtrex	100	84.423	Anabas_testudineus
ENSCPBG00000026551	MTREX	90	94.949	ENSAPLG00000009694	MTREX	99	94.949	Anas_platyrhynchos
ENSCPBG00000026551	MTREX	94	93.846	ENSACAG00000015200	MTREX	98	92.053	Anolis_carolinensis
ENSCPBG00000026551	MTREX	94	92.330	ENSANAG00000023095	MTREX	98	94.483	Aotus_nancymaae
ENSCPBG00000026551	MTREX	94	83.670	ENSACLG00000001921	mtrex	100	83.766	Astatotilapia_calliptera
ENSCPBG00000026551	MTREX	89	85.137	ENSAMXG00000018751	mtrex	99	85.339	Astyanax_mexicanus
ENSCPBG00000026551	MTREX	94	92.603	ENSBTAG00000010518	MTREX	100	91.835	Bos_taurus
ENSCPBG00000026551	MTREX	86	54.259	WBGene00012342	mtr-4	96	53.030	Caenorhabditis_elegans
ENSCPBG00000026551	MTREX	94	91.516	ENSCJAG00000001773	MTREX	100	91.516	Callithrix_jacchus
ENSCPBG00000026551	MTREX	94	93.097	ENSCAFG00000006818	MTREX	100	92.617	Canis_familiaris
ENSCPBG00000026551	MTREX	94	93.097	ENSCAFG00020024352	MTREX	100	92.617	Canis_lupus_dingo
ENSCPBG00000026551	MTREX	94	92.330	ENSCHIG00000024413	MTREX	100	91.659	Capra_hircus
ENSCPBG00000026551	MTREX	87	94.255	ENSTSYG00000007389	MTREX	100	94.255	Carlito_syrichta
ENSCPBG00000026551	MTREX	90	69.570	ENSCAPG00000008696	MTREX	99	69.539	Cavia_aperea
ENSCPBG00000026551	MTREX	94	92.330	ENSCPOG00000009797	MTREX	100	91.946	Cavia_porcellus
ENSCPBG00000026551	MTREX	94	92.330	ENSCCAG00000014177	MTREX	100	92.330	Cebus_capucinus
ENSCPBG00000026551	MTREX	94	92.042	ENSCATG00000042153	MTREX	100	92.042	Cercocebus_atys
ENSCPBG00000026551	MTREX	94	91.874	ENSCLAG00000006622	MTREX	100	92.042	Chinchilla_lanigera
ENSCPBG00000026551	MTREX	94	87.954	ENSCSAG00000016445	MTREX	100	87.954	Chlorocebus_sabaeus
ENSCPBG00000026551	MTREX	65	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCPBG00000026551	MTREX	93	66.730	ENSCING00000003239	-	99	66.857	Ciona_intestinalis
ENSCPBG00000026551	MTREX	93	66.412	ENSCSAVG00000009304	-	100	70.538	Ciona_savignyi
ENSCPBG00000026551	MTREX	94	92.426	ENSCANG00000035770	MTREX	100	92.042	Colobus_angolensis_palliatus
ENSCPBG00000026551	MTREX	94	92.514	ENSCGRG00001024680	Mtrex	100	92.418	Cricetulus_griseus_chok1gshd
ENSCPBG00000026551	MTREX	94	92.514	ENSCGRG00000000307	Mtrex	100	92.418	Cricetulus_griseus_crigri
ENSCPBG00000026551	MTREX	94	82.917	ENSCSEG00000018621	mtrex	98	82.917	Cynoglossus_semilaevis
ENSCPBG00000026551	MTREX	94	84.135	ENSCVAG00000004556	mtrex	100	84.038	Cyprinodon_variegatus
ENSCPBG00000026551	MTREX	94	86.180	ENSDARG00000013457	mtrex	100	85.632	Danio_rerio
ENSCPBG00000026551	MTREX	94	91.882	ENSDNOG00000015375	MTREX	100	91.691	Dasypus_novemcinctus
ENSCPBG00000026551	MTREX	94	92.138	ENSDORG00000006782	Mtrex	100	92.138	Dipodomys_ordii
ENSCPBG00000026551	MTREX	93	63.645	FBgn0001986	Mtr4	91	66.424	Drosophila_melanogaster
ENSCPBG00000026551	MTREX	85	76.033	ENSETEG00000000727	MTREX	90	76.033	Echinops_telfairi
ENSCPBG00000026551	MTREX	93	75.483	ENSEBUG00000012869	mtrex	99	75.193	Eptatretus_burgeri
ENSCPBG00000026551	MTREX	94	92.426	ENSEASG00005013270	MTREX	100	92.426	Equus_asinus_asinus
ENSCPBG00000026551	MTREX	94	92.522	ENSECAG00000023723	MTREX	100	96.296	Equus_caballus
ENSCPBG00000026551	MTREX	92	84.308	ENSEEUG00000000527	MTREX	100	83.431	Erinaceus_europaeus
ENSCPBG00000026551	MTREX	92	86.634	ENSELUG00000004898	mtrex	100	90.231	Esox_lucius
ENSCPBG00000026551	MTREX	94	92.809	ENSFCAG00000010575	MTREX	100	92.330	Felis_catus
ENSCPBG00000026551	MTREX	94	92.204	ENSFALG00000010850	MTREX	100	92.093	Ficedula_albicollis
ENSCPBG00000026551	MTREX	94	91.931	ENSFDAG00000011199	MTREX	100	91.739	Fukomys_damarensis
ENSCPBG00000026551	MTREX	94	84.231	ENSFHEG00000023014	mtrex	100	82.042	Fundulus_heteroclitus
ENSCPBG00000026551	MTREX	94	81.635	ENSGMOG00000014702	mtrex	100	81.635	Gadus_morhua
ENSCPBG00000026551	MTREX	97	91.970	ENSGALG00000014709	MTREX	89	91.450	Gallus_gallus
ENSCPBG00000026551	MTREX	94	84.726	ENSGAFG00000012425	mtrex	100	84.645	Gambusia_affinis
ENSCPBG00000026551	MTREX	94	79.885	ENSGACG00000016260	mtrex	96	85.652	Gasterosteus_aculeatus
ENSCPBG00000026551	MTREX	94	98.549	ENSGAGG00000020036	MTREX	100	98.549	Gopherus_agassizii
ENSCPBG00000026551	MTREX	94	92.138	ENSGGOG00000001867	MTREX	100	92.138	Gorilla_gorilla
ENSCPBG00000026551	MTREX	94	83.670	ENSHBUG00000006229	mtrex	100	83.766	Haplochromis_burtoni
ENSCPBG00000026551	MTREX	94	92.315	ENSHGLG00000019445	SKIV2L2	100	92.315	Heterocephalus_glaber_female
ENSCPBG00000026551	MTREX	94	92.315	ENSHGLG00100011833	SKIV2L2	100	92.315	Heterocephalus_glaber_male
ENSCPBG00000026551	MTREX	86	84.623	ENSHCOG00000019995	mtrex	100	84.623	Hippocampus_comes
ENSCPBG00000026551	MTREX	94	86.359	ENSIPUG00000024348	skiv2l2	100	86.359	Ictalurus_punctatus
ENSCPBG00000026551	MTREX	94	92.138	ENSSTOG00000010802	MTREX	100	92.138	Ictidomys_tridecemlineatus
ENSCPBG00000026551	MTREX	94	87.091	ENSJJAG00000020975	Mtrex	100	85.605	Jaculus_jaculus
ENSCPBG00000026551	MTREX	94	83.446	ENSKMAG00000012642	mtrex	100	83.446	Kryptolebias_marmoratus
ENSCPBG00000026551	MTREX	94	83.958	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSCPBG00000026551	MTREX	94	90.637	ENSLACG00000009075	MTREX	100	89.672	Latimeria_chalumnae
ENSCPBG00000026551	MTREX	94	88.139	ENSLOCG00000010186	mtrex	100	87.704	Lepisosteus_oculatus
ENSCPBG00000026551	MTREX	94	89.933	ENSLAFG00000010497	MTREX	100	89.037	Loxodonta_africana
ENSCPBG00000026551	MTREX	94	92.042	ENSMFAG00000031610	MTREX	100	92.042	Macaca_fascicularis
ENSCPBG00000026551	MTREX	94	90.918	ENSMMUG00000010379	MTREX	100	90.304	Macaca_mulatta
ENSCPBG00000026551	MTREX	94	92.042	ENSMNEG00000032746	MTREX	100	92.042	Macaca_nemestrina
ENSCPBG00000026551	MTREX	94	92.042	ENSMLEG00000041051	MTREX	100	92.042	Mandrillus_leucophaeus
ENSCPBG00000026551	MTREX	94	83.446	ENSMAMG00000016753	mtrex	97	86.829	Mastacembelus_armatus
ENSCPBG00000026551	MTREX	94	83.670	ENSMZEG00005000414	mtrex	100	83.766	Maylandia_zebra
ENSCPBG00000026551	MTREX	89	69.402	ENSMGAG00000003980	MTREX	99	69.402	Meleagris_gallopavo
ENSCPBG00000026551	MTREX	94	92.706	ENSMAUG00000010727	Mtrex	100	92.610	Mesocricetus_auratus
ENSCPBG00000026551	MTREX	94	92.522	ENSMICG00000012779	MTREX	100	92.522	Microcebus_murinus
ENSCPBG00000026551	MTREX	94	92.426	ENSMOCG00000019886	Mtrex	100	90.857	Microtus_ochrogaster
ENSCPBG00000026551	MTREX	94	82.500	ENSMMOG00000002476	mtrex	100	82.500	Mola_mola
ENSCPBG00000026551	MTREX	94	93.043	ENSMODG00000019494	MTREX	100	92.754	Monodelphis_domestica
ENSCPBG00000026551	MTREX	86	82.702	ENSMALG00000002917	mtrex	99	82.702	Monopterus_albus
ENSCPBG00000026551	MTREX	94	92.411	MGP_CAROLIEiJ_G0018896	Mtrex	100	91.931	Mus_caroli
ENSCPBG00000026551	MTREX	94	92.699	ENSMUSG00000016018	Mtrex	100	92.219	Mus_musculus
ENSCPBG00000026551	MTREX	94	92.123	MGP_PahariEiJ_G0015967	Mtrex	100	91.643	Mus_pahari
ENSCPBG00000026551	MTREX	94	92.699	MGP_SPRETEiJ_G0019775	Mtrex	100	92.219	Mus_spretus
ENSCPBG00000026551	MTREX	94	92.426	ENSMPUG00000007619	MTREX	100	92.426	Mustela_putorius_furo
ENSCPBG00000026551	MTREX	94	91.954	ENSMLUG00000001152	MTREX	100	91.954	Myotis_lucifugus
ENSCPBG00000026551	MTREX	94	92.433	ENSNGAG00000011938	Mtrex	100	91.048	Nannospalax_galili
ENSCPBG00000026551	MTREX	94	83.766	ENSNBRG00000011293	mtrex	100	83.862	Neolamprologus_brichardi
ENSCPBG00000026551	MTREX	94	87.943	ENSNLEG00000001494	MTREX	100	87.656	Nomascus_leucogenys
ENSCPBG00000026551	MTREX	78	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCPBG00000026551	MTREX	94	78.269	ENSOPRG00000008009	MTREX	100	78.173	Ochotona_princeps
ENSCPBG00000026551	MTREX	94	91.467	ENSODEG00000017234	MTREX	100	91.083	Octodon_degus
ENSCPBG00000026551	MTREX	94	83.670	ENSONIG00000007587	mtrex	100	83.766	Oreochromis_niloticus
ENSCPBG00000026551	MTREX	94	92.699	ENSOCUG00000004463	MTREX	100	92.219	Oryctolagus_cuniculus
ENSCPBG00000026551	MTREX	94	83.750	ENSORLG00000005443	mtrex	100	83.750	Oryzias_latipes
ENSCPBG00000026551	MTREX	94	83.654	ENSORLG00020006329	mtrex	100	83.654	Oryzias_latipes_hni
ENSCPBG00000026551	MTREX	94	83.654	ENSORLG00015012924	mtrex	100	83.654	Oryzias_latipes_hsok
ENSCPBG00000026551	MTREX	94	83.126	ENSOMEG00000008825	mtrex	100	83.126	Oryzias_melastigma
ENSCPBG00000026551	MTREX	94	92.042	ENSOGAG00000002886	MTREX	100	92.042	Otolemur_garnettii
ENSCPBG00000026551	MTREX	94	92.065	ENSOARG00000007764	MTREX	100	91.396	Ovis_aries
ENSCPBG00000026551	MTREX	94	92.042	ENSPPAG00000039291	MTREX	100	91.755	Pan_paniscus
ENSCPBG00000026551	MTREX	94	92.809	ENSPPRG00000019701	MTREX	100	92.330	Panthera_pardus
ENSCPBG00000026551	MTREX	94	91.275	ENSPTIG00000009313	MTREX	100	90.796	Panthera_tigris_altaica
ENSCPBG00000026551	MTREX	94	92.042	ENSPTRG00000016878	MTREX	100	91.755	Pan_troglodytes
ENSCPBG00000026551	MTREX	94	91.946	ENSPANG00000009697	MTREX	100	91.946	Papio_anubis
ENSCPBG00000026551	MTREX	94	87.524	ENSPKIG00000020833	mtrex	100	87.332	Paramormyrops_kingsleyae
ENSCPBG00000026551	MTREX	94	98.743	ENSPSIG00000012150	MTREX	100	98.743	Pelodiscus_sinensis
ENSCPBG00000026551	MTREX	94	81.940	ENSPMGG00000002582	mtrex	100	82.037	Periophthalmus_magnuspinnatus
ENSCPBG00000026551	MTREX	89	66.194	ENSPMAG00000009668	mtrex	100	65.891	Petromyzon_marinus
ENSCPBG00000026551	MTREX	86	96.093	ENSPCIG00000024730	MTREX	100	96.093	Phascolarctos_cinereus
ENSCPBG00000026551	MTREX	71	87.959	ENSPFOG00000003141	mtrex	100	88.198	Poecilia_formosa
ENSCPBG00000026551	MTREX	94	84.423	ENSPLAG00000021311	mtrex	100	84.630	Poecilia_latipinna
ENSCPBG00000026551	MTREX	87	87.474	ENSPMEG00000010597	mtrex	99	87.787	Poecilia_mexicana
ENSCPBG00000026551	MTREX	94	84.135	ENSPREG00000003089	mtrex	100	84.342	Poecilia_reticulata
ENSCPBG00000026551	MTREX	92	92.008	ENSPPYG00000015469	MTREX	98	92.008	Pongo_abelii
ENSCPBG00000026551	MTREX	88	79.535	ENSPCAG00000013120	MTREX	94	79.535	Procavia_capensis
ENSCPBG00000026551	MTREX	92	86.737	ENSPCOG00000018092	MTREX	100	86.737	Propithecus_coquereli
ENSCPBG00000026551	MTREX	94	92.234	ENSPVAG00000002445	MTREX	100	92.234	Pteropus_vampyrus
ENSCPBG00000026551	MTREX	94	83.573	ENSPNYG00000006164	mtrex	100	83.670	Pundamilia_nyererei
ENSCPBG00000026551	MTREX	94	86.538	ENSPNAG00000008794	mtrex	100	86.538	Pygocentrus_nattereri
ENSCPBG00000026551	MTREX	93	91.384	ENSRNOG00000010125	Mtrex	97	91.384	Rattus_norvegicus
ENSCPBG00000026551	MTREX	94	90.316	ENSRBIG00000034930	MTREX	100	90.316	Rhinopithecus_bieti
ENSCPBG00000026551	MTREX	94	92.042	ENSRROG00000039895	MTREX	100	92.042	Rhinopithecus_roxellana
ENSCPBG00000026551	MTREX	84	56.184	YJL050W	MTR4	95	53.869	Saccharomyces_cerevisiae
ENSCPBG00000026551	MTREX	94	92.234	ENSSBOG00000026693	MTREX	98	94.483	Saimiri_boliviensis_boliviensis
ENSCPBG00000026551	MTREX	90	94.188	ENSSHAG00000004600	MTREX	99	94.183	Sarcophilus_harrisii
ENSCPBG00000026551	MTREX	94	87.969	ENSSFOG00015014355	skiv2l2	100	87.440	Scleropages_formosus
ENSCPBG00000026551	MTREX	94	83.750	ENSSMAG00000007572	mtrex	100	83.750	Scophthalmus_maximus
ENSCPBG00000026551	MTREX	94	84.357	ENSSDUG00000023789	mtrex	100	84.054	Seriola_dumerili
ENSCPBG00000026551	MTREX	94	84.261	ENSSLDG00000006301	mtrex	100	83.958	Seriola_lalandi_dorsalis
ENSCPBG00000026551	MTREX	94	90.403	ENSSARG00000008387	MTREX	100	90.403	Sorex_araneus
ENSCPBG00000026551	MTREX	94	82.802	ENSSPUG00000007071	MTREX	100	82.802	Sphenodon_punctatus
ENSCPBG00000026551	MTREX	94	82.495	ENSSPAG00000011319	mtrex	100	82.579	Stegastes_partitus
ENSCPBG00000026551	MTREX	94	92.426	ENSSSCG00000016911	MTREX	100	92.426	Sus_scrofa
ENSCPBG00000026551	MTREX	94	92.189	ENSTGUG00000002480	MTREX	100	91.522	Taeniopygia_guttata
ENSCPBG00000026551	MTREX	94	83.766	ENSTRUG00000014571	mtrex	100	83.750	Takifugu_rubripes
ENSCPBG00000026551	MTREX	94	76.510	ENSTBEG00000007769	MTREX	100	76.510	Tupaia_belangeri
ENSCPBG00000026551	MTREX	94	92.507	ENSTTRG00000008678	MTREX	100	92.027	Tursiops_truncatus
ENSCPBG00000026551	MTREX	94	92.138	ENSUAMG00000023061	MTREX	100	91.946	Ursus_americanus
ENSCPBG00000026551	MTREX	94	91.579	ENSUMAG00000009373	MTREX	99	97.241	Ursus_maritimus
ENSCPBG00000026551	MTREX	94	82.838	ENSVPAG00000011174	MTREX	100	82.167	Vicugna_pacos
ENSCPBG00000026551	MTREX	94	93.001	ENSVVUG00000021337	MTREX	100	92.522	Vulpes_vulpes
ENSCPBG00000026551	MTREX	94	89.961	ENSXETG00000032798	MTREX	100	89.382	Xenopus_tropicalis
ENSCPBG00000026551	MTREX	94	84.327	ENSXMAG00000004799	mtrex	100	84.327	Xiphophorus_maculatus