EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026626 (Gene tree)
Gene ID: 101943568
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 401874 bases
Position: chrKK088206.1:5715578-6117451
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038527	Fox-1_C	PF12414.8	3.4e-43	1	1
ENSCPBP00000038523	Fox-1_C	PF12414.8	4.6e-43	1	1
ENSCPBP00000038530	Fox-1_C	PF12414.8	7.3e-41	1	1
ENSCPBP00000038524	Fox-1_C	PF12414.8	8.6e-41	1	1
ENSCPBP00000038532	Fox-1_C	PF12414.8	1.5e-40	1	1
ENSCPBP00000038535	Fox-1_C	PF12414.8	1.9e-20	1	1
ENSCPBP00000038532	RRM_1	PF00076.22	1.4e-18	1	1
ENSCPBP00000038527	RRM_1	PF00076.22	3.6e-18	1	1
ENSCPBP00000038524	RRM_1	PF00076.22	3.7e-18	1	1
ENSCPBP00000038523	RRM_1	PF00076.22	3.7e-18	1	1
ENSCPBP00000038535	RRM_1	PF00076.22	3.7e-18	1	1
ENSCPBP00000038530	RRM_1	PF00076.22	6.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045168	RBFOX1-205	2139	-	ENSCPBP00000038532	400 (aa)	-	-
ENSCPBT00000045166	RBFOX1-204	2189	-	ENSCPBP00000038530	376 (aa)	-	-
ENSCPBT00000045163	RBFOX1-203	2059	-	ENSCPBP00000038527	409 (aa)	-	-
ENSCPBT00000045160	RBFOX1-202	2193	-	ENSCPBP00000038524	413 (aa)	-	-
ENSCPBT00000045171	RBFOX1-206	2096	-	ENSCPBP00000038535	345 (aa)	-	-
ENSCPBT00000045159	RBFOX1-201	2276	-	ENSCPBP00000038523	411 (aa)	XP_008160807	UPI00046C3589

Gene Model

Click here to download ENSCPBG00000026626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026626	RBFOX1	100	60.046	ENSCPBG00000023144	RBFOX2	100	65.816
ENSCPBG00000026626	RBFOX1	98	63.728	ENSCPBG00000010904	RBFOX3	100	79.299
ENSCPBG00000026626	RBFOX1	98	47.677	ENSCPBG00000010944	-	97	53.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026626	RBFOX1	98	94.615	ENSG00000078328	RBFOX1	100	93.651	Homo_sapiens
ENSCPBG00000026626	RBFOX1	96	83.051	ENSAPOG00000003197	rbfox1	100	82.809	Acanthochromis_polyacanthus
ENSCPBG00000026626	RBFOX1	64	92.793	ENSAMEG00000008605	RBFOX1	93	89.700	Ailuropoda_melanoleuca
ENSCPBG00000026626	RBFOX1	61	75.000	ENSACIG00000005478	rbfox1	68	71.747	Amphilophus_citrinellus
ENSCPBG00000026626	RBFOX1	87	70.032	ENSAOCG00000008283	rbfox1	97	77.113	Amphiprion_ocellaris
ENSCPBG00000026626	RBFOX1	95	69.737	ENSAPEG00000010636	rbfox1	100	70.811	Amphiprion_percula
ENSCPBG00000026626	RBFOX1	87	69.279	ENSATEG00000007513	rbfox1	100	77.460	Anabas_testudineus
ENSCPBG00000026626	RBFOX1	98	96.939	ENSAPLG00000013263	RBFOX1	97	99.485	Anas_platyrhynchos
ENSCPBG00000026626	RBFOX1	99	86.717	ENSACAG00000004013	RBFOX1	99	88.665	Anolis_carolinensis
ENSCPBG00000026626	RBFOX1	100	94.250	ENSANAG00000029527	RBFOX1	100	94.250	Aotus_nancymaae
ENSCPBG00000026626	RBFOX1	65	88.889	ENSAMXG00000002431	rbfox1	73	89.558	Astyanax_mexicanus
ENSCPBG00000026626	RBFOX1	100	94.149	ENSBTAG00000007210	RBFOX1	100	94.149	Bos_taurus
ENSCPBG00000026626	RBFOX1	98	94.615	ENSCJAG00000017351	RBFOX1	93	94.845	Callithrix_jacchus
ENSCPBG00000026626	RBFOX1	98	94.872	ENSCAFG00000019082	RBFOX1	93	94.872	Canis_familiaris
ENSCPBG00000026626	RBFOX1	97	85.075	ENSCAFG00020024881	RBFOX1	92	84.776	Canis_lupus_dingo
ENSCPBG00000026626	RBFOX1	100	94.681	ENSCHIG00000023549	RBFOX1	100	94.681	Capra_hircus
ENSCPBG00000026626	RBFOX1	97	94.795	ENSTSYG00000005334	RBFOX1	100	95.291	Carlito_syrichta
ENSCPBG00000026626	RBFOX1	98	93.846	ENSCAPG00000017669	RBFOX1	100	94.072	Cavia_aperea
ENSCPBG00000026626	RBFOX1	98	93.846	ENSCPOG00000011314	RBFOX1	99	94.072	Cavia_porcellus
ENSCPBG00000026626	RBFOX1	98	94.615	ENSCCAG00000023031	RBFOX1	97	95.330	Cebus_capucinus
ENSCPBG00000026626	RBFOX1	98	94.615	ENSCATG00000033816	RBFOX1	97	95.330	Cercocebus_atys
ENSCPBG00000026626	RBFOX1	100	92.819	ENSCLAG00000012761	RBFOX1	100	92.819	Chinchilla_lanigera
ENSCPBG00000026626	RBFOX1	100	94.681	ENSCSAG00000008739	RBFOX1	100	94.681	Chlorocebus_sabaeus
ENSCPBG00000026626	RBFOX1	98	72.194	ENSCHOG00000012843	RBFOX1	94	72.194	Choloepus_hoffmanni
ENSCPBG00000026626	RBFOX1	98	94.615	ENSCANG00000033125	RBFOX1	97	95.330	Colobus_angolensis_palliatus
ENSCPBG00000026626	RBFOX1	98	93.112	ENSCGRG00001013729	Rbfox1	98	93.814	Cricetulus_griseus_chok1gshd
ENSCPBG00000026626	RBFOX1	98	93.112	ENSCGRG00000003272	Rbfox1	98	93.814	Cricetulus_griseus_crigri
ENSCPBG00000026626	RBFOX1	95	69.598	ENSCSEG00000008840	rbfox1	100	77.027	Cynoglossus_semilaevis
ENSCPBG00000026626	RBFOX1	100	80.549	ENSDARG00000014746	rbfox1	99	89.130	Danio_rerio
ENSCPBG00000026626	RBFOX1	98	93.077	ENSDNOG00000043612	RBFOX1	93	95.103	Dasypus_novemcinctus
ENSCPBG00000026626	RBFOX1	98	90.331	ENSDORG00000010024	Rbfox1	97	92.327	Dipodomys_ordii
ENSCPBG00000026626	RBFOX1	98	75.128	ENSETEG00000003771	RBFOX1	100	69.856	Echinops_telfairi
ENSCPBG00000026626	RBFOX1	100	94.500	ENSEASG00005011599	RBFOX1	100	94.500	Equus_asinus_asinus
ENSCPBG00000026626	RBFOX1	100	94.415	ENSECAG00000012667	RBFOX1	100	94.415	Equus_caballus
ENSCPBG00000026626	RBFOX1	82	68.605	ENSELUG00000013096	rbfox1	97	73.832	Esox_lucius
ENSCPBG00000026626	RBFOX1	100	94.681	ENSFCAG00000025322	RBFOX1	100	94.681	Felis_catus
ENSCPBG00000026626	RBFOX1	86	99.381	ENSFALG00000004027	RBFOX1	100	97.006	Ficedula_albicollis
ENSCPBG00000026626	RBFOX1	98	94.359	ENSFDAG00000007388	RBFOX1	98	94.588	Fukomys_damarensis
ENSCPBG00000026626	RBFOX1	100	99.516	ENSGALG00000034325	RBFOX1	100	99.516	Gallus_gallus
ENSCPBG00000026626	RBFOX1	98	99.487	ENSGAGG00000023681	RBFOX1	100	99.735	Gopherus_agassizii
ENSCPBG00000026626	RBFOX1	98	94.615	ENSGGOG00000016871	-	97	95.330	Gorilla_gorilla
ENSCPBG00000026626	RBFOX1	100	93.085	ENSHGLG00000016944	RBFOX1	100	93.085	Heterocephalus_glaber_female
ENSCPBG00000026626	RBFOX1	100	93.085	ENSHGLG00100003272	RBFOX1	100	93.085	Heterocephalus_glaber_male
ENSCPBG00000026626	RBFOX1	94	63.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSCPBG00000026626	RBFOX1	100	82.181	ENSIPUG00000015215	rbfox1	100	91.714	Ictalurus_punctatus
ENSCPBG00000026626	RBFOX1	100	92.819	ENSSTOG00000000322	RBFOX1	100	92.819	Ictidomys_tridecemlineatus
ENSCPBG00000026626	RBFOX1	98	91.026	ENSJJAG00000002575	Rbfox1	98	91.237	Jaculus_jaculus
ENSCPBG00000026626	RBFOX1	97	74.559	ENSLBEG00000014659	rbfox1	97	79.620	Labrus_bergylta
ENSCPBG00000026626	RBFOX1	98	88.041	ENSLOCG00000006675	rbfox1	98	90.026	Lepisosteus_oculatus
ENSCPBG00000026626	RBFOX1	77	96.104	ENSLAFG00000011480	RBFOX1	100	96.104	Loxodonta_africana
ENSCPBG00000026626	RBFOX1	98	94.872	ENSMFAG00000036447	RBFOX1	97	95.604	Macaca_fascicularis
ENSCPBG00000026626	RBFOX1	98	95.393	ENSMMUG00000003458	RBFOX1	99	95.393	Macaca_mulatta
ENSCPBG00000026626	RBFOX1	100	94.947	ENSMNEG00000032034	RBFOX1	93	94.872	Macaca_nemestrina
ENSCPBG00000026626	RBFOX1	98	94.615	ENSMLEG00000015382	RBFOX1	97	95.330	Mandrillus_leucophaeus
ENSCPBG00000026626	RBFOX1	95	72.774	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSCPBG00000026626	RBFOX1	84	91.753	ENSMGAG00000008606	RBFOX1	98	91.608	Meleagris_gallopavo
ENSCPBG00000026626	RBFOX1	96	54.047	ENSMAUG00000020570	Rbfox1	96	54.167	Mesocricetus_auratus
ENSCPBG00000026626	RBFOX1	100	92.042	ENSMICG00000034286	RBFOX1	100	92.042	Microcebus_murinus
ENSCPBG00000026626	RBFOX1	98	93.112	ENSMOCG00000020932	Rbfox1	100	93.750	Microtus_ochrogaster
ENSCPBG00000026626	RBFOX1	85	72.941	ENSMMOG00000009716	rbfox1	86	79.167	Mola_mola
ENSCPBG00000026626	RBFOX1	94	97.175	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSCPBG00000026626	RBFOX1	99	81.535	ENSMALG00000003337	rbfox1	100	80.779	Monopterus_albus
ENSCPBG00000026626	RBFOX1	100	92.553	MGP_CAROLIEiJ_G0020427	Rbfox1	98	94.072	Mus_caroli
ENSCPBG00000026626	RBFOX1	98	93.112	ENSMUSG00000008658	Rbfox1	99	95.455	Mus_musculus
ENSCPBG00000026626	RBFOX1	100	92.287	MGP_PahariEiJ_G0016135	Rbfox1	98	94.072	Mus_pahari
ENSCPBG00000026626	RBFOX1	100	92.021	MGP_SPRETEiJ_G0021321	Rbfox1	98	93.557	Mus_spretus
ENSCPBG00000026626	RBFOX1	97	94.809	ENSMPUG00000014822	RBFOX1	94	94.070	Mustela_putorius_furo
ENSCPBG00000026626	RBFOX1	75	96.091	ENSMLUG00000015896	RBFOX1	100	96.091	Myotis_lucifugus
ENSCPBG00000026626	RBFOX1	98	93.878	ENSNGAG00000023276	Rbfox1	100	94.588	Nannospalax_galili
ENSCPBG00000026626	RBFOX1	98	60.628	ENSNBRG00000011084	rbfox1	95	63.119	Neolamprologus_brichardi
ENSCPBG00000026626	RBFOX1	98	94.359	ENSNLEG00000010017	-	97	95.055	Nomascus_leucogenys
ENSCPBG00000026626	RBFOX1	97	79.692	ENSMEUG00000012525	RBFOX1	93	79.692	Notamacropus_eugenii
ENSCPBG00000026626	RBFOX1	98	75.641	ENSOPRG00000006199	-	79	91.667	Ochotona_princeps
ENSCPBG00000026626	RBFOX1	98	93.590	ENSODEG00000013166	RBFOX1	98	93.814	Octodon_degus
ENSCPBG00000026626	RBFOX1	100	96.543	ENSOANG00000002379	RBFOX1	100	96.543	Ornithorhynchus_anatinus
ENSCPBG00000026626	RBFOX1	63	94.009	ENSOCUG00000001205	-	96	94.444	Oryctolagus_cuniculus
ENSCPBG00000026626	RBFOX1	99	91.624	ENSOGAG00000025535	RBFOX1	98	94.588	Otolemur_garnettii
ENSCPBG00000026626	RBFOX1	70	83.128	ENSOARG00000005135	RBFOX1	99	81.855	Ovis_aries
ENSCPBG00000026626	RBFOX1	98	94.054	ENSPPAG00000036238	-	100	95.568	Pan_paniscus
ENSCPBG00000026626	RBFOX1	98	94.615	ENSPPRG00000006546	RBFOX1	99	93.566	Panthera_pardus
ENSCPBG00000026626	RBFOX1	98	80.916	ENSPTIG00000021154	RBFOX1	99	82.519	Panthera_tigris_altaica
ENSCPBG00000026626	RBFOX1	98	94.615	ENSPTRG00000007744	RBFOX1	97	95.330	Pan_troglodytes
ENSCPBG00000026626	RBFOX1	98	94.615	ENSPANG00000026500	RBFOX1	97	95.330	Papio_anubis
ENSCPBG00000026626	RBFOX1	90	84.466	ENSPKIG00000019353	rbfox1	89	94.257	Paramormyrops_kingsleyae
ENSCPBG00000026626	RBFOX1	97	89.000	ENSPKIG00000009667	-	95	92.375	Paramormyrops_kingsleyae
ENSCPBG00000026626	RBFOX1	100	97.750	ENSPSIG00000006523	RBFOX1	100	97.750	Pelodiscus_sinensis
ENSCPBG00000026626	RBFOX1	98	93.367	ENSPEMG00000017607	Rbfox1	98	94.072	Peromyscus_maniculatus_bairdii
ENSCPBG00000026626	RBFOX1	73	92.466	ENSPCIG00000026887	RBFOX1	100	93.448	Phascolarctos_cinereus
ENSCPBG00000026626	RBFOX1	97	95.082	ENSPPYG00000007079	-	93	95.082	Pongo_abelii
ENSCPBG00000026626	RBFOX1	88	86.286	ENSPCAG00000002630	RBFOX1	93	86.286	Procavia_capensis
ENSCPBG00000026626	RBFOX1	98	94.103	ENSPCOG00000025687	RBFOX1	99	93.029	Propithecus_coquereli
ENSCPBG00000026626	RBFOX1	98	90.000	ENSPVAG00000013467	RBFOX1	93	90.000	Pteropus_vampyrus
ENSCPBG00000026626	RBFOX1	95	80.353	ENSPNAG00000023109	rbfox1	100	88.618	Pygocentrus_nattereri
ENSCPBG00000026626	RBFOX1	100	90.186	ENSRNOG00000002827	Rbfox1	100	90.186	Rattus_norvegicus
ENSCPBG00000026626	RBFOX1	100	94.681	ENSRBIG00000044478	RBFOX1	100	95.568	Rhinopithecus_bieti
ENSCPBG00000026626	RBFOX1	98	94.615	ENSRROG00000044411	RBFOX1	97	95.330	Rhinopithecus_roxellana
ENSCPBG00000026626	RBFOX1	100	92.500	ENSSBOG00000033726	RBFOX1	100	92.500	Saimiri_boliviensis_boliviensis
ENSCPBG00000026626	RBFOX1	99	90.201	ENSSHAG00000009257	RBFOX1	98	92.839	Sarcophilus_harrisii
ENSCPBG00000026626	RBFOX1	100	67.574	ENSSFOG00015023675	rbfox1	99	88.889	Scleropages_formosus
ENSCPBG00000026626	RBFOX1	88	72.299	ENSSFOG00015009955	-	89	75.354	Scleropages_formosus
ENSCPBG00000026626	RBFOX1	96	82.767	ENSSMAG00000015505	rbfox1	100	82.524	Scophthalmus_maximus
ENSCPBG00000026626	RBFOX1	98	74.177	ENSSDUG00000016413	rbfox1	100	79.459	Seriola_dumerili
ENSCPBG00000026626	RBFOX1	85	72.141	ENSSLDG00000009353	rbfox1	98	79.341	Seriola_lalandi_dorsalis
ENSCPBG00000026626	RBFOX1	85	85.630	ENSSPUG00000009732	RBFOX1	87	93.291	Sphenodon_punctatus
ENSCPBG00000026626	RBFOX1	97	74.939	ENSSPAG00000009723	rbfox1	100	82.058	Stegastes_partitus
ENSCPBG00000026626	RBFOX1	97	92.371	ENSSSCG00000007917	RBFOX1	100	94.915	Sus_scrofa
ENSCPBG00000026626	RBFOX1	98	97.436	ENSTGUG00000004562	RBFOX1	99	99.485	Taeniopygia_guttata
ENSCPBG00000026626	RBFOX1	98	75.061	ENSTRUG00000020940	rbfox1	99	82.105	Takifugu_rubripes
ENSCPBG00000026626	RBFOX1	70	57.787	ENSTNIG00000002567	rbfox1	100	65.157	Tetraodon_nigroviridis
ENSCPBG00000026626	RBFOX1	57	97.778	ENSTBEG00000009169	-	56	97.778	Tupaia_belangeri
ENSCPBG00000026626	RBFOX1	98	94.103	ENSTTRG00000005700	RBFOX1	93	94.103	Tursiops_truncatus
ENSCPBG00000026626	RBFOX1	98	88.315	ENSUAMG00000024633	RBFOX1	100	88.101	Ursus_americanus
ENSCPBG00000026626	RBFOX1	98	80.000	ENSUMAG00000003579	RBFOX1	99	80.407	Ursus_maritimus
ENSCPBG00000026626	RBFOX1	77	95.455	ENSVPAG00000001284	RBFOX1	74	95.455	Vicugna_pacos
ENSCPBG00000026626	RBFOX1	100	94.681	ENSVVUG00000017311	RBFOX1	100	94.681	Vulpes_vulpes