EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026658 (Gene tree)
Gene ID: 101948413
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 11438 bases
Position: chrKK082967.1:4039740-4051177
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038573	RTC	PF01137.21	9.8e-86	1	1
ENSCPBP00000038576	RTC	PF01137.21	2e-84	1	1
ENSCPBP00000038576	RTC_insert	PF05189.13	5e-24	1	1
ENSCPBP00000038573	RTC_insert	PF05189.13	5.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045224	RTCA-202	1632	-	ENSCPBP00000038576	343 (aa)	-	-
ENSCPBT00000045220	RTCA-201	1345	-	ENSCPBP00000038573	365 (aa)	XP_005300961	UPI000388DABE

Gene Model

Click here to download ENSCPBG00000026658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026658	RTCA	100	83.880	ENSG00000137996	RTCA	100	83.880	Homo_sapiens
ENSCPBG00000026658	RTCA	100	68.219	ENSAPOG00000001345	rtca	99	68.219	Acanthochromis_polyacanthus
ENSCPBG00000026658	RTCA	73	82.156	ENSAMEG00000008855	RTCA	100	82.156	Ailuropoda_melanoleuca
ENSCPBG00000026658	RTCA	100	67.671	ENSACIG00000019643	rtca	100	67.671	Amphilophus_citrinellus
ENSCPBG00000026658	RTCA	100	68.493	ENSAOCG00000014979	rtca	99	68.493	Amphiprion_ocellaris
ENSCPBG00000026658	RTCA	100	68.493	ENSAPEG00000006945	rtca	99	68.493	Amphiprion_percula
ENSCPBG00000026658	RTCA	100	66.027	ENSATEG00000006315	rtca	100	66.027	Anabas_testudineus
ENSCPBG00000026658	RTCA	96	86.402	ENSAPLG00000015430	RTCA	100	86.402	Anas_platyrhynchos
ENSCPBG00000026658	RTCA	100	82.240	ENSANAG00000025446	RTCA	100	82.240	Aotus_nancymaae
ENSCPBG00000026658	RTCA	100	66.849	ENSACLG00000020770	rtca	99	66.849	Astatotilapia_calliptera
ENSCPBG00000026658	RTCA	98	69.916	ENSAMXG00000043271	rtca	98	69.916	Astyanax_mexicanus
ENSCPBG00000026658	RTCA	100	84.699	ENSBTAG00000006321	RTCA	100	84.699	Bos_taurus
ENSCPBG00000026658	RTCA	100	82.514	ENSCJAG00000003398	RTCA	100	82.514	Callithrix_jacchus
ENSCPBG00000026658	RTCA	100	83.880	ENSCAFG00000020010	RTCA	68	83.880	Canis_familiaris
ENSCPBG00000026658	RTCA	100	83.880	ENSCAFG00020011528	RTCA	57	83.880	Canis_lupus_dingo
ENSCPBG00000026658	RTCA	100	84.426	ENSCHIG00000018937	RTCA	100	84.426	Capra_hircus
ENSCPBG00000026658	RTCA	100	82.787	ENSTSYG00000011305	RTCA	100	82.787	Carlito_syrichta
ENSCPBG00000026658	RTCA	100	82.514	ENSCCAG00000021844	RTCA	99	84.084	Cebus_capucinus
ENSCPBG00000026658	RTCA	100	80.211	ENSCATG00000019364	RTCA	100	82.524	Cercocebus_atys
ENSCPBG00000026658	RTCA	87	83.861	ENSCLAG00000006125	RTCA	100	83.861	Chinchilla_lanigera
ENSCPBG00000026658	RTCA	100	83.333	ENSCSAG00000001509	RTCA	100	83.333	Chlorocebus_sabaeus
ENSCPBG00000026658	RTCA	100	84.153	ENSCHOG00000005211	RTCA	100	84.153	Choloepus_hoffmanni
ENSCPBG00000026658	RTCA	99	54.023	ENSCING00000007875	-	99	53.846	Ciona_intestinalis
ENSCPBG00000026658	RTCA	99	53.463	ENSCSAVG00000007269	-	99	53.463	Ciona_savignyi
ENSCPBG00000026658	RTCA	100	83.060	ENSCANG00000040106	RTCA	100	83.060	Colobus_angolensis_palliatus
ENSCPBG00000026658	RTCA	73	82.156	ENSCGRG00001013163	Rtca	85	82.156	Cricetulus_griseus_chok1gshd
ENSCPBG00000026658	RTCA	98	66.852	ENSCSEG00000000530	rtca	96	66.852	Cynoglossus_semilaevis
ENSCPBG00000026658	RTCA	100	55.200	ENSCVAG00000021809	rtca	100	55.200	Cyprinodon_variegatus
ENSCPBG00000026658	RTCA	100	70.137	ENSDARG00000002215	rtca	100	70.137	Danio_rerio
ENSCPBG00000026658	RTCA	100	83.607	ENSDNOG00000000456	RTCA	100	83.607	Dasypus_novemcinctus
ENSCPBG00000026658	RTCA	50	30.508	ENSDNOG00000019911	RCL1	80	30.508	Dasypus_novemcinctus
ENSCPBG00000026658	RTCA	100	82.787	ENSDORG00000005448	Rtca	100	82.787	Dipodomys_ordii
ENSCPBG00000026658	RTCA	99	39.118	FBgn0025630	Rtca	99	39.118	Drosophila_melanogaster
ENSCPBG00000026658	RTCA	98	56.012	ENSEBUG00000008556	rtca	94	56.560	Eptatretus_burgeri
ENSCPBG00000026658	RTCA	100	84.153	ENSEASG00005015926	RTCA	100	84.153	Equus_asinus_asinus
ENSCPBG00000026658	RTCA	100	84.153	ENSECAG00000019831	RTCA	100	84.153	Equus_caballus
ENSCPBG00000026658	RTCA	97	75.145	ENSEEUG00000001165	RTCA	100	75.145	Erinaceus_europaeus
ENSCPBG00000026658	RTCA	98	67.787	ENSELUG00000003741	rtca	98	67.787	Esox_lucius
ENSCPBG00000026658	RTCA	100	84.153	ENSFCAG00000024460	RTCA	100	84.153	Felis_catus
ENSCPBG00000026658	RTCA	99	90.294	ENSFALG00000002443	RTCA	91	90.294	Ficedula_albicollis
ENSCPBG00000026658	RTCA	98	66.851	ENSFDAG00000016084	-	100	66.851	Fukomys_damarensis
ENSCPBG00000026658	RTCA	100	82.787	ENSFDAG00000012070	-	100	82.787	Fukomys_damarensis
ENSCPBG00000026658	RTCA	57	69.036	ENSFHEG00000002868	rtca	92	64.516	Fundulus_heteroclitus
ENSCPBG00000026658	RTCA	100	66.575	ENSGMOG00000013264	rtca	100	66.575	Gadus_morhua
ENSCPBG00000026658	RTCA	100	90.137	ENSGALG00000005277	RTCA	100	90.137	Gallus_gallus
ENSCPBG00000026658	RTCA	100	67.945	ENSGAFG00000011853	rtca	99	67.945	Gambusia_affinis
ENSCPBG00000026658	RTCA	100	66.575	ENSGACG00000013497	rtca	100	66.575	Gasterosteus_aculeatus
ENSCPBG00000026658	RTCA	85	98.635	ENSGAGG00000023306	RTCA	100	98.635	Gopherus_agassizii
ENSCPBG00000026658	RTCA	100	83.333	ENSGGOG00000009546	-	100	83.333	Gorilla_gorilla
ENSCPBG00000026658	RTCA	100	82.787	ENSGGOG00000044018	-	100	82.787	Gorilla_gorilla
ENSCPBG00000026658	RTCA	100	66.849	ENSHBUG00000002114	rtca	99	66.849	Haplochromis_burtoni
ENSCPBG00000026658	RTCA	100	82.514	ENSHGLG00000002617	RTCA	100	82.514	Heterocephalus_glaber_female
ENSCPBG00000026658	RTCA	100	82.514	ENSHGLG00100006056	RTCA	100	82.514	Heterocephalus_glaber_male
ENSCPBG00000026658	RTCA	100	61.918	ENSHCOG00000020628	rtca	89	61.918	Hippocampus_comes
ENSCPBG00000026658	RTCA	100	69.315	ENSIPUG00000024803	rtca	100	69.315	Ictalurus_punctatus
ENSCPBG00000026658	RTCA	100	77.049	ENSSTOG00000013528	-	100	77.049	Ictidomys_tridecemlineatus
ENSCPBG00000026658	RTCA	100	72.678	ENSSTOG00000033099	-	100	72.678	Ictidomys_tridecemlineatus
ENSCPBG00000026658	RTCA	100	60.656	ENSJJAG00000016178	Rtca	100	60.656	Jaculus_jaculus
ENSCPBG00000026658	RTCA	100	68.493	ENSKMAG00000006651	rtca	99	68.493	Kryptolebias_marmoratus
ENSCPBG00000026658	RTCA	99	66.389	ENSLBEG00000028971	rtca	99	66.389	Labrus_bergylta
ENSCPBG00000026658	RTCA	88	65.625	ENSLBEG00000002448	-	99	65.625	Labrus_bergylta
ENSCPBG00000026658	RTCA	100	74.247	ENSLACG00000013666	RTCA	100	74.247	Latimeria_chalumnae
ENSCPBG00000026658	RTCA	99	69.890	ENSLOCG00000000093	rtca	99	69.890	Lepisosteus_oculatus
ENSCPBG00000026658	RTCA	100	84.426	ENSLAFG00000001473	RTCA	100	84.426	Loxodonta_africana
ENSCPBG00000026658	RTCA	100	83.333	ENSMFAG00000034132	RTCA	100	83.333	Macaca_fascicularis
ENSCPBG00000026658	RTCA	100	82.787	ENSMMUG00000019105	RTCA	100	82.787	Macaca_mulatta
ENSCPBG00000026658	RTCA	84	82.848	ENSMNEG00000037163	RTCA	100	82.848	Macaca_nemestrina
ENSCPBG00000026658	RTCA	100	68.306	ENSMLEG00000042151	RTCA	100	68.306	Mandrillus_leucophaeus
ENSCPBG00000026658	RTCA	100	69.315	ENSMAMG00000016536	rtca	100	69.315	Mastacembelus_armatus
ENSCPBG00000026658	RTCA	100	66.849	ENSMZEG00005017945	rtca	99	66.849	Maylandia_zebra
ENSCPBG00000026658	RTCA	87	88.050	ENSMGAG00000006892	RTCA	99	88.050	Meleagris_gallopavo
ENSCPBG00000026658	RTCA	100	82.787	ENSMAUG00000008488	Rtca	100	82.787	Mesocricetus_auratus
ENSCPBG00000026658	RTCA	84	83.819	ENSMICG00000008643	RTCA	100	83.819	Microcebus_murinus
ENSCPBG00000026658	RTCA	100	82.787	ENSMOCG00000016660	Rtca	100	82.787	Microtus_ochrogaster
ENSCPBG00000026658	RTCA	84	67.857	ENSMMOG00000007750	rtca	100	67.857	Mola_mola
ENSCPBG00000026658	RTCA	99	85.399	ENSMODG00000003557	RTCA	99	85.399	Monodelphis_domestica
ENSCPBG00000026658	RTCA	100	69.315	ENSMALG00000020844	rtca	100	69.315	Monopterus_albus
ENSCPBG00000026658	RTCA	100	82.787	MGP_CAROLIEiJ_G0025565	Rtca	100	83.099	Mus_caroli
ENSCPBG00000026658	RTCA	100	82.514	ENSMUSG00000000339	Rtca	100	83.099	Mus_musculus
ENSCPBG00000026658	RTCA	100	82.514	MGP_PahariEiJ_G0027011	Rtca	100	82.514	Mus_pahari
ENSCPBG00000026658	RTCA	100	82.514	MGP_SPRETEiJ_G0026515	Rtca	100	82.514	Mus_spretus
ENSCPBG00000026658	RTCA	100	83.880	ENSMPUG00000012119	RTCA	100	83.880	Mustela_putorius_furo
ENSCPBG00000026658	RTCA	100	79.019	ENSMLUG00000009922	RTCA	100	79.019	Myotis_lucifugus
ENSCPBG00000026658	RTCA	100	82.514	ENSNGAG00000011540	Rtca	99	82.514	Nannospalax_galili
ENSCPBG00000026658	RTCA	100	66.849	ENSNBRG00000003062	rtca	99	66.849	Neolamprologus_brichardi
ENSCPBG00000026658	RTCA	100	83.607	ENSNLEG00000031426	RTCA	100	83.607	Nomascus_leucogenys
ENSCPBG00000026658	RTCA	52	85.366	ENSMEUG00000010030	-	52	85.227	Notamacropus_eugenii
ENSCPBG00000026658	RTCA	73	79.926	ENSOPRG00000012092	RTCA	71	79.926	Ochotona_princeps
ENSCPBG00000026658	RTCA	95	83.908	ENSODEG00000006990	RTCA	96	84.046	Octodon_degus
ENSCPBG00000026658	RTCA	100	66.849	ENSONIG00000007753	rtca	99	66.849	Oreochromis_niloticus
ENSCPBG00000026658	RTCA	87	82.019	ENSOANG00000012055	RTCA	98	82.019	Ornithorhynchus_anatinus
ENSCPBG00000026658	RTCA	100	84.426	ENSOCUG00000014247	RTCA	100	84.426	Oryctolagus_cuniculus
ENSCPBG00000026658	RTCA	100	67.671	ENSORLG00000013605	rtca	100	67.671	Oryzias_latipes
ENSCPBG00000026658	RTCA	100	67.671	ENSORLG00020001904	rtca	100	67.671	Oryzias_latipes_hni
ENSCPBG00000026658	RTCA	100	67.397	ENSORLG00015021064	rtca	100	67.397	Oryzias_latipes_hsok
ENSCPBG00000026658	RTCA	100	69.041	ENSOMEG00000000756	rtca	100	69.041	Oryzias_melastigma
ENSCPBG00000026658	RTCA	100	74.863	ENSOGAG00000005627	RTCA	100	74.863	Otolemur_garnettii
ENSCPBG00000026658	RTCA	87	83.648	ENSOARG00000018122	RTCA	100	83.648	Ovis_aries
ENSCPBG00000026658	RTCA	100	80.739	ENSPPAG00000035119	RTCA	100	83.172	Pan_paniscus
ENSCPBG00000026658	RTCA	100	83.880	ENSPPRG00000000350	RTCA	100	83.880	Panthera_pardus
ENSCPBG00000026658	RTCA	100	83.880	ENSPTIG00000012816	RTCA	100	83.880	Panthera_tigris_altaica
ENSCPBG00000026658	RTCA	100	80.211	ENSPTRG00000001004	RTCA	100	82.524	Pan_troglodytes
ENSCPBG00000026658	RTCA	100	83.607	ENSPANG00000000346	RTCA	100	83.607	Papio_anubis
ENSCPBG00000026658	RTCA	100	70.411	ENSPKIG00000001653	rtca	100	70.411	Paramormyrops_kingsleyae
ENSCPBG00000026658	RTCA	100	96.438	ENSPSIG00000011408	RTCA	100	96.438	Pelodiscus_sinensis
ENSCPBG00000026658	RTCA	100	82.514	ENSPEMG00000018582	Rtca	100	82.514	Peromyscus_maniculatus_bairdii
ENSCPBG00000026658	RTCA	99	55.679	ENSPMAG00000009110	rtca	99	55.220	Petromyzon_marinus
ENSCPBG00000026658	RTCA	100	85.246	ENSPCIG00000007684	RTCA	100	85.246	Phascolarctos_cinereus
ENSCPBG00000026658	RTCA	100	68.306	ENSPFOG00000004824	rtca	100	68.306	Poecilia_formosa
ENSCPBG00000026658	RTCA	100	68.493	ENSPLAG00000011753	rtca	99	68.493	Poecilia_latipinna
ENSCPBG00000026658	RTCA	100	68.493	ENSPMEG00000020469	rtca	99	68.493	Poecilia_mexicana
ENSCPBG00000026658	RTCA	100	69.315	ENSPREG00000001365	rtca	99	69.315	Poecilia_reticulata
ENSCPBG00000026658	RTCA	100	83.333	ENSPPYG00000001115	RTCA	100	83.333	Pongo_abelii
ENSCPBG00000026658	RTCA	99	81.163	ENSPCAG00000005076	RTCA	99	81.163	Procavia_capensis
ENSCPBG00000026658	RTCA	100	84.153	ENSPCOG00000005603	RTCA	100	84.153	Propithecus_coquereli
ENSCPBG00000026658	RTCA	100	80.211	ENSPVAG00000009478	RTCA	100	80.211	Pteropus_vampyrus
ENSCPBG00000026658	RTCA	100	66.849	ENSPNYG00000004722	rtca	99	66.849	Pundamilia_nyererei
ENSCPBG00000026658	RTCA	100	69.863	ENSPNAG00000022270	rtca	100	69.863	Pygocentrus_nattereri
ENSCPBG00000026658	RTCA	100	82.514	ENSRNOG00000014575	Rtca	100	82.514	Rattus_norvegicus
ENSCPBG00000026658	RTCA	100	79.947	ENSRBIG00000041180	RTCA	100	82.201	Rhinopithecus_bieti
ENSCPBG00000026658	RTCA	100	82.787	ENSRROG00000024929	RTCA	100	82.787	Rhinopithecus_roxellana
ENSCPBG00000026658	RTCA	100	82.514	ENSSBOG00000028626	RTCA	100	82.514	Saimiri_boliviensis_boliviensis
ENSCPBG00000026658	RTCA	100	85.792	ENSSHAG00000001758	RTCA	100	85.792	Sarcophilus_harrisii
ENSCPBG00000026658	RTCA	98	66.574	ENSSMAG00000014680	rtca	97	66.574	Scophthalmus_maximus
ENSCPBG00000026658	RTCA	98	68.245	ENSSDUG00000015585	rtca	97	68.245	Seriola_dumerili
ENSCPBG00000026658	RTCA	96	68.000	ENSSLDG00000018985	rtca	95	68.000	Seriola_lalandi_dorsalis
ENSCPBG00000026658	RTCA	87	79.495	ENSSARG00000013993	RTCA	100	79.495	Sorex_araneus
ENSCPBG00000026658	RTCA	100	67.671	ENSSPAG00000011938	rtca	99	67.671	Stegastes_partitus
ENSCPBG00000026658	RTCA	100	84.426	ENSSSCG00000006865	RTCA	100	84.426	Sus_scrofa
ENSCPBG00000026658	RTCA	100	90.137	ENSTGUG00000005154	RTCA	100	90.137	Taeniopygia_guttata
ENSCPBG00000026658	RTCA	100	67.397	ENSTRUG00000008799	rtca	100	67.397	Takifugu_rubripes
ENSCPBG00000026658	RTCA	100	66.849	ENSTNIG00000004725	rtca	100	66.849	Tetraodon_nigroviridis
ENSCPBG00000026658	RTCA	59	74.545	ENSTBEG00000000943	RTCA	64	84.314	Tupaia_belangeri
ENSCPBG00000026658	RTCA	100	79.420	ENSTTRG00000015327	RTCA	100	79.420	Tursiops_truncatus
ENSCPBG00000026658	RTCA	98	85.373	ENSUAMG00000017265	RTCA	94	85.373	Ursus_americanus
ENSCPBG00000026658	RTCA	100	83.333	ENSUMAG00000007881	RTCA	100	83.333	Ursus_maritimus
ENSCPBG00000026658	RTCA	87	74.448	ENSVPAG00000001039	RTCA	84	74.448	Vicugna_pacos
ENSCPBG00000026658	RTCA	100	83.607	ENSVVUG00000022041	RTCA	68	83.607	Vulpes_vulpes
ENSCPBG00000026658	RTCA	99	63.014	ENSXETG00000031661	RTCA	99	63.014	Xenopus_tropicalis
ENSCPBG00000026658	RTCA	100	60.000	ENSXCOG00000008002	rtca	100	60.000	Xiphophorus_couchianus
ENSCPBG00000026658	RTCA	100	68.219	ENSXMAG00000005482	rtca	99	68.219	Xiphophorus_maculatus