EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026671 (Gene tree)
Gene ID: 101948973
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 12211 bases
Position: chrKK082967.1:4095436-4107646
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038592	TRM13	PF05206.14	6.1e-89	1	1
ENSCPBP00000038591	TRM13	PF05206.14	7.7e-89	1	1
ENSCPBP00000038592	zf-U11-48K	PF05253.12	6.5e-11	1	1
ENSCPBP00000038591	zf-U11-48K	PF05253.12	6.7e-11	1	1
ENSCPBP00000038592	zf-TRM13_CCCH	PF11722.8	3.4e-12	1	1
ENSCPBP00000038591	zf-TRM13_CCCH	PF11722.8	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045244	TRMT13-201	2270	XM_008170607	ENSCPBP00000038591	476 (aa)	XP_008168829	UPI0003889D2D
ENSCPBT00000045245	TRMT13-202	2159	XM_008170608	ENSCPBP00000038592	439 (aa)	XP_008168830	UPI00046C3741

Gene Model

Click here to download ENSCPBG00000026671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026671	TRMT13	99	68.958	ENSG00000122435	TRMT13	99	68.958	Homo_sapiens
ENSCPBG00000026671	TRMT13	96	49.605	ENSAPOG00000015131	trmt13	99	50.707	Acanthochromis_polyacanthus
ENSCPBG00000026671	TRMT13	100	69.647	ENSAMEG00000008917	TRMT13	100	69.647	Ailuropoda_melanoleuca
ENSCPBG00000026671	TRMT13	97	52.201	ENSACIG00000005804	trmt13	97	51.351	Amphilophus_citrinellus
ENSCPBG00000026671	TRMT13	96	50.100	ENSAOCG00000023585	trmt13	99	50.100	Amphiprion_ocellaris
ENSCPBG00000026671	TRMT13	96	50.301	ENSAPEG00000004025	trmt13	99	50.301	Amphiprion_percula
ENSCPBG00000026671	TRMT13	95	54.095	ENSATEG00000006597	trmt13	96	54.095	Anabas_testudineus
ENSCPBG00000026671	TRMT13	89	75.991	ENSAPLG00000014924	TRMT13	99	75.991	Anas_platyrhynchos
ENSCPBG00000026671	TRMT13	97	72.863	ENSACAG00000003498	TRMT13	99	72.863	Anolis_carolinensis
ENSCPBG00000026671	TRMT13	99	69.167	ENSANAG00000019525	TRMT13	99	69.167	Aotus_nancymaae
ENSCPBG00000026671	TRMT13	96	54.255	ENSACLG00000020018	trmt13	99	54.255	Astatotilapia_calliptera
ENSCPBG00000026671	TRMT13	97	55.180	ENSAMXG00000017963	trmt13	99	55.391	Astyanax_mexicanus
ENSCPBG00000026671	TRMT13	100	69.647	ENSBTAG00000015781	TRMT13	100	69.647	Bos_taurus
ENSCPBG00000026671	TRMT13	99	68.125	ENSCJAG00000000200	TRMT13	90	78.195	Callithrix_jacchus
ENSCPBG00000026671	TRMT13	71	70.064	ENSCAFG00000020021	TRMT13	99	70.064	Canis_familiaris
ENSCPBG00000026671	TRMT13	57	74.539	ENSCAFG00020011572	TRMT13	95	73.993	Canis_lupus_dingo
ENSCPBG00000026671	TRMT13	100	70.062	ENSCHIG00000015395	TRMT13	100	70.062	Capra_hircus
ENSCPBG00000026671	TRMT13	97	64.026	ENSTSYG00000010811	TRMT13	90	76.923	Carlito_syrichta
ENSCPBG00000026671	TRMT13	73	56.196	ENSCAPG00000009085	TRMT13	95	60.000	Cavia_aperea
ENSCPBG00000026671	TRMT13	100	68.750	ENSCPOG00000000694	TRMT13	100	68.750	Cavia_porcellus
ENSCPBG00000026671	TRMT13	99	69.375	ENSCCAG00000023772	TRMT13	99	69.375	Cebus_capucinus
ENSCPBG00000026671	TRMT13	99	68.750	ENSCATG00000033556	TRMT13	99	68.750	Cercocebus_atys
ENSCPBG00000026671	TRMT13	89	68.000	ENSCLAG00000008220	TRMT13	100	67.606	Chinchilla_lanigera
ENSCPBG00000026671	TRMT13	99	69.375	ENSCSAG00000001506	TRMT13	99	69.375	Chlorocebus_sabaeus
ENSCPBG00000026671	TRMT13	99	69.167	ENSCANG00000034659	TRMT13	99	69.167	Colobus_angolensis_palliatus
ENSCPBG00000026671	TRMT13	99	66.807	ENSCGRG00001021601	Trmt13	99	66.807	Cricetulus_griseus_chok1gshd
ENSCPBG00000026671	TRMT13	58	63.813	ENSCGRG00000000093	-	99	63.813	Cricetulus_griseus_crigri
ENSCPBG00000026671	TRMT13	97	49.892	ENSCSEG00000000591	trmt13	99	49.892	Cynoglossus_semilaevis
ENSCPBG00000026671	TRMT13	98	50.928	ENSCVAG00000017342	trmt13	96	51.753	Cyprinodon_variegatus
ENSCPBG00000026671	TRMT13	95	59.170	ENSDARG00000102846	trmt13	96	59.170	Danio_rerio
ENSCPBG00000026671	TRMT13	54	73.384	ENSDNOG00000001710	TRMT13	80	73.384	Dasypus_novemcinctus
ENSCPBG00000026671	TRMT13	100	67.775	ENSDORG00000015808	Trmt13	99	67.775	Dipodomys_ordii
ENSCPBG00000026671	TRMT13	97	34.511	FBgn0037435	CG18048	96	34.511	Drosophila_melanogaster
ENSCPBG00000026671	TRMT13	99	59.205	ENSETEG00000005819	TRMT13	98	59.205	Echinops_telfairi
ENSCPBG00000026671	TRMT13	94	47.277	ENSEBUG00000014444	trmt13	96	47.391	Eptatretus_burgeri
ENSCPBG00000026671	TRMT13	100	70.062	ENSEASG00005015918	TRMT13	100	70.062	Equus_asinus_asinus
ENSCPBG00000026671	TRMT13	100	70.062	ENSECAG00000022626	TRMT13	100	70.062	Equus_caballus
ENSCPBG00000026671	TRMT13	78	64.062	ENSEEUG00000000294	TRMT13	78	64.062	Erinaceus_europaeus
ENSCPBG00000026671	TRMT13	97	54.661	ENSELUG00000003803	trmt13	99	54.661	Esox_lucius
ENSCPBG00000026671	TRMT13	100	70.478	ENSFCAG00000030618	TRMT13	100	70.478	Felis_catus
ENSCPBG00000026671	TRMT13	99	75.527	ENSFALG00000002424	TRMT13	99	75.527	Ficedula_albicollis
ENSCPBG00000026671	TRMT13	99	68.842	ENSFDAG00000006342	TRMT13	98	68.842	Fukomys_damarensis
ENSCPBG00000026671	TRMT13	78	55.181	ENSFHEG00000022954	trmt13	98	54.478	Fundulus_heteroclitus
ENSCPBG00000026671	TRMT13	95	50.221	ENSGMOG00000013223	trmt13	100	50.794	Gadus_morhua
ENSCPBG00000026671	TRMT13	96	77.293	ENSGALG00000005290	TRMT13	99	76.160	Gallus_gallus
ENSCPBG00000026671	TRMT13	76	53.050	ENSGAFG00000001577	trmt13	82	53.358	Gambusia_affinis
ENSCPBG00000026671	TRMT13	98	52.431	ENSGACG00000013428	trmt13	98	53.419	Gasterosteus_aculeatus
ENSCPBG00000026671	TRMT13	100	96.868	ENSGAGG00000023303	TRMT13	100	96.868	Gopherus_agassizii
ENSCPBG00000026671	TRMT13	99	68.958	ENSGGOG00000005616	TRMT13	99	68.958	Gorilla_gorilla
ENSCPBG00000026671	TRMT13	96	54.468	ENSHBUG00000007754	trmt13	99	54.468	Haplochromis_burtoni
ENSCPBG00000026671	TRMT13	99	69.263	ENSHGLG00000002164	TRMT13	98	69.263	Heterocephalus_glaber_female
ENSCPBG00000026671	TRMT13	99	69.263	ENSHGLG00100001618	TRMT13	98	69.263	Heterocephalus_glaber_male
ENSCPBG00000026671	TRMT13	95	49.130	ENSHCOG00000020553	trmt13	97	49.130	Hippocampus_comes
ENSCPBG00000026671	TRMT13	98	55.864	ENSIPUG00000024787	trmt13	100	55.864	Ictalurus_punctatus
ENSCPBG00000026671	TRMT13	99	70.000	ENSSTOG00000013483	TRMT13	99	70.000	Ictidomys_tridecemlineatus
ENSCPBG00000026671	TRMT13	99	67.227	ENSJJAG00000018012	Trmt13	99	67.227	Jaculus_jaculus
ENSCPBG00000026671	TRMT13	73	49.394	ENSKMAG00000007639	trmt13	97	50.313	Kryptolebias_marmoratus
ENSCPBG00000026671	TRMT13	97	51.992	ENSLBEG00000020238	trmt13	100	52.421	Labrus_bergylta
ENSCPBG00000026671	TRMT13	97	64.894	ENSLACG00000013153	TRMT13	100	64.339	Latimeria_chalumnae
ENSCPBG00000026671	TRMT13	97	59.091	ENSLOCG00000000418	trmt13	98	59.091	Lepisosteus_oculatus
ENSCPBG00000026671	TRMT13	85	65.172	ENSLAFG00000002383	TRMT13	100	69.730	Loxodonta_africana
ENSCPBG00000026671	TRMT13	99	68.958	ENSMFAG00000034681	TRMT13	99	68.958	Macaca_fascicularis
ENSCPBG00000026671	TRMT13	99	68.958	ENSMMUG00000004243	TRMT13	99	68.958	Macaca_mulatta
ENSCPBG00000026671	TRMT13	99	68.958	ENSMNEG00000036102	TRMT13	99	68.958	Macaca_nemestrina
ENSCPBG00000026671	TRMT13	99	68.750	ENSMLEG00000034258	TRMT13	99	68.750	Mandrillus_leucophaeus
ENSCPBG00000026671	TRMT13	98	53.459	ENSMAMG00000016597	trmt13	99	53.459	Mastacembelus_armatus
ENSCPBG00000026671	TRMT13	96	54.043	ENSMZEG00005020959	trmt13	99	54.043	Maylandia_zebra
ENSCPBG00000026671	TRMT13	89	77.647	ENSMGAG00000006970	TRMT13	100	77.647	Meleagris_gallopavo
ENSCPBG00000026671	TRMT13	99	67.782	ENSMAUG00000010448	Trmt13	99	67.782	Mesocricetus_auratus
ENSCPBG00000026671	TRMT13	100	69.439	ENSMICG00000005283	TRMT13	100	69.439	Microcebus_murinus
ENSCPBG00000026671	TRMT13	99	67.015	ENSMOCG00000019914	Trmt13	99	67.015	Microtus_ochrogaster
ENSCPBG00000026671	TRMT13	55	50.936	ENSMMOG00000007762	trmt13	90	52.590	Mola_mola
ENSCPBG00000026671	TRMT13	100	69.215	ENSMODG00000003646	TRMT13	100	69.215	Monodelphis_domestica
ENSCPBG00000026671	TRMT13	97	51.398	ENSMALG00000020965	trmt13	98	51.398	Monopterus_albus
ENSCPBG00000026671	TRMT13	99	67.017	MGP_CAROLIEiJ_G0025568	Trmt13	94	73.214	Mus_caroli
ENSCPBG00000026671	TRMT13	99	68.000	ENSMUSG00000033439	Trmt13	94	74.405	Mus_musculus
ENSCPBG00000026671	TRMT13	99	66.667	MGP_PahariEiJ_G0027014	Trmt13	93	74.096	Mus_pahari
ENSCPBG00000026671	TRMT13	99	68.211	MGP_SPRETEiJ_G0026518	Trmt13	94	74.405	Mus_spretus
ENSCPBG00000026671	TRMT13	87	63.824	ENSMPUG00000002078	-	99	68.865	Mustela_putorius_furo
ENSCPBG00000026671	TRMT13	100	65.417	ENSMLUG00000002124	TRMT13	100	65.417	Myotis_lucifugus
ENSCPBG00000026671	TRMT13	95	50.641	ENSNBRG00000006783	trmt13	97	50.641	Neolamprologus_brichardi
ENSCPBG00000026671	TRMT13	99	68.750	ENSNLEG00000035917	TRMT13	99	68.750	Nomascus_leucogenys
ENSCPBG00000026671	TRMT13	52	65.726	ENSMEUG00000013346	-	100	65.726	Notamacropus_eugenii
ENSCPBG00000026671	TRMT13	66	73.063	ENSOPRG00000012048	TRMT13	65	73.063	Ochotona_princeps
ENSCPBG00000026671	TRMT13	96	53.830	ENSONIG00000004574	trmt13	99	53.830	Oreochromis_niloticus
ENSCPBG00000026671	TRMT13	90	70.439	ENSOANG00000012057	TRMT13	99	70.439	Ornithorhynchus_anatinus
ENSCPBG00000026671	TRMT13	100	69.375	ENSOCUG00000023095	TRMT13	100	69.375	Oryctolagus_cuniculus
ENSCPBG00000026671	TRMT13	97	50.107	ENSORLG00000003320	trmt13	99	50.107	Oryzias_latipes
ENSCPBG00000026671	TRMT13	97	49.578	ENSORLG00020005972	trmt13	98	49.578	Oryzias_latipes_hni
ENSCPBG00000026671	TRMT13	97	53.518	ENSORLG00015002270	trmt13	99	53.518	Oryzias_latipes_hsok
ENSCPBG00000026671	TRMT13	97	51.891	ENSOMEG00000006724	trmt13	95	53.390	Oryzias_melastigma
ENSCPBG00000026671	TRMT13	98	68.710	ENSOGAG00000005618	TRMT13	96	68.619	Otolemur_garnettii
ENSCPBG00000026671	TRMT13	100	70.062	ENSOARG00000017983	TRMT13	100	70.062	Ovis_aries
ENSCPBG00000026671	TRMT13	99	68.750	ENSPPAG00000043736	TRMT13	99	68.750	Pan_paniscus
ENSCPBG00000026671	TRMT13	100	70.478	ENSPPRG00000003424	TRMT13	100	70.478	Panthera_pardus
ENSCPBG00000026671	TRMT13	100	70.478	ENSPTIG00000018598	TRMT13	100	70.478	Panthera_tigris_altaica
ENSCPBG00000026671	TRMT13	99	68.750	ENSPTRG00000001001	TRMT13	99	68.750	Pan_troglodytes
ENSCPBG00000026671	TRMT13	99	69.167	ENSPANG00000007598	TRMT13	99	69.167	Papio_anubis
ENSCPBG00000026671	TRMT13	97	55.724	ENSPKIG00000001514	trmt13	99	55.724	Paramormyrops_kingsleyae
ENSCPBG00000026671	TRMT13	87	91.304	ENSPSIG00000012703	TRMT13	99	91.304	Pelodiscus_sinensis
ENSCPBG00000026671	TRMT13	98	52.854	ENSPMGG00000013298	trmt13	96	52.854	Periophthalmus_magnuspinnatus
ENSCPBG00000026671	TRMT13	96	68.615	ENSPEMG00000000275	Trmt13	96	68.615	Peromyscus_maniculatus_bairdii
ENSCPBG00000026671	TRMT13	95	47.280	ENSPMAG00000000823	trmt13	100	46.926	Petromyzon_marinus
ENSCPBG00000026671	TRMT13	100	70.722	ENSPCIG00000007699	TRMT13	100	71.340	Phascolarctos_cinereus
ENSCPBG00000026671	TRMT13	97	51.502	ENSPFOG00000008675	trmt13	97	51.502	Poecilia_formosa
ENSCPBG00000026671	TRMT13	96	51.163	ENSPLAG00000009709	trmt13	99	51.163	Poecilia_latipinna
ENSCPBG00000026671	TRMT13	96	50.213	ENSPMEG00000022954	trmt13	99	50.213	Poecilia_mexicana
ENSCPBG00000026671	TRMT13	76	54.642	ENSPREG00000005645	trmt13	92	55.357	Poecilia_reticulata
ENSCPBG00000026671	TRMT13	99	68.750	ENSPPYG00000001120	TRMT13	99	68.750	Pongo_abelii
ENSCPBG00000026671	TRMT13	99	68.344	ENSPCAG00000002340	TRMT13	99	68.344	Procavia_capensis
ENSCPBG00000026671	TRMT13	100	69.231	ENSPCOG00000017984	TRMT13	100	69.231	Propithecus_coquereli
ENSCPBG00000026671	TRMT13	99	69.167	ENSPVAG00000017430	TRMT13	99	69.167	Pteropus_vampyrus
ENSCPBG00000026671	TRMT13	96	52.043	ENSPNYG00000013690	trmt13	99	52.043	Pundamilia_nyererei
ENSCPBG00000026671	TRMT13	97	56.596	ENSPNAG00000022130	trmt13	99	56.596	Pygocentrus_nattereri
ENSCPBG00000026671	TRMT13	99	68.211	ENSRNOG00000015140	Trmt13	96	68.211	Rattus_norvegicus
ENSCPBG00000026671	TRMT13	99	69.167	ENSRBIG00000037686	TRMT13	99	69.167	Rhinopithecus_bieti
ENSCPBG00000026671	TRMT13	99	69.167	ENSRROG00000044057	TRMT13	99	69.167	Rhinopithecus_roxellana
ENSCPBG00000026671	TRMT13	99	68.958	ENSSBOG00000026541	TRMT13	99	68.958	Saimiri_boliviensis_boliviensis
ENSCPBG00000026671	TRMT13	90	72.517	ENSSHAG00000005213	TRMT13	96	72.517	Sarcophilus_harrisii
ENSCPBG00000026671	TRMT13	98	55.745	ENSSFOG00015017560	trmt13	99	55.745	Scleropages_formosus
ENSCPBG00000026671	TRMT13	98	51.875	ENSSMAG00000014592	trmt13	98	51.875	Scophthalmus_maximus
ENSCPBG00000026671	TRMT13	97	50.207	ENSSDUG00000015508	trmt13	98	50.000	Seriola_dumerili
ENSCPBG00000026671	TRMT13	99	49.388	ENSSLDG00000019060	trmt13	98	49.388	Seriola_lalandi_dorsalis
ENSCPBG00000026671	TRMT13	99	63.235	ENSSARG00000010344	TRMT13	99	63.235	Sorex_araneus
ENSCPBG00000026671	TRMT13	96	80.435	ENSSPUG00000016339	TRMT13	100	80.435	Sphenodon_punctatus
ENSCPBG00000026671	TRMT13	96	52.553	ENSSPAG00000011922	trmt13	99	52.954	Stegastes_partitus
ENSCPBG00000026671	TRMT13	100	69.647	ENSSSCG00000006869	TRMT13	100	69.647	Sus_scrofa
ENSCPBG00000026671	TRMT13	97	75.269	ENSTGUG00000005253	TRMT13	100	75.269	Taeniopygia_guttata
ENSCPBG00000026671	TRMT13	95	50.429	ENSTRUG00000008400	trmt13	98	50.426	Takifugu_rubripes
ENSCPBG00000026671	TRMT13	87	56.971	ENSTBEG00000008911	TRMT13	100	56.971	Tupaia_belangeri
ENSCPBG00000026671	TRMT13	55	79.730	ENSTTRG00000015302	-	60	79.730	Tursiops_truncatus
ENSCPBG00000026671	TRMT13	100	67.888	ENSUAMG00000017251	TRMT13	100	67.888	Ursus_americanus
ENSCPBG00000026671	TRMT13	100	70.270	ENSUMAG00000007901	TRMT13	99	71.991	Ursus_maritimus
ENSCPBG00000026671	TRMT13	84	87.273	ENSVPAG00000001034	TRMT13	86	87.273	Vicugna_pacos
ENSCPBG00000026671	TRMT13	99	69.937	ENSVVUG00000021996	TRMT13	99	69.937	Vulpes_vulpes
ENSCPBG00000026671	TRMT13	98	58.351	ENSXETG00000013204	trmt13	99	58.351	Xenopus_tropicalis
ENSCPBG00000026671	TRMT13	96	50.529	ENSXMAG00000010765	trmt13	99	50.529	Xiphophorus_maculatus