EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026682 (Gene tree)
Gene ID: 101954071
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 31363 bases
Position: chrKK088207.1:2645-34007
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038609	ResIII	PF04851.15	2.3e-06	1	1
ENSCPBP00000038607	ResIII	PF04851.15	2.3e-06	1	1
ENSCPBP00000038609	DEAD	PF00270.29	1.9e-49	1	1
ENSCPBP00000038607	DEAD	PF00270.29	1.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045264	DDX42-201	4485	XM_005312976	ENSCPBP00000038607	955 (aa)	XP_005313033	UPI000388AE5E
ENSCPBT00000045266	DDX42-202	4815	-	ENSCPBP00000038609	947 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000026682's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026682	DDX42	52	42.460	ENSCPBG00000008261	DDX46	61	40.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026682	DDX42	100	83.213	ENSG00000198231	DDX42	100	91.346	Homo_sapiens
ENSCPBG00000026682	DDX42	90	76.023	ENSAPOG00000017675	ddx42	99	74.342	Acanthochromis_polyacanthus
ENSCPBG00000026682	DDX42	100	85.162	ENSAMEG00000003200	DDX42	100	84.848	Ailuropoda_melanoleuca
ENSCPBG00000026682	DDX42	85	70.012	ENSACIG00000007376	ddx42	99	72.930	Amphilophus_citrinellus
ENSCPBG00000026682	DDX42	99	72.385	ENSAOCG00000003520	ddx42	99	73.424	Amphiprion_ocellaris
ENSCPBG00000026682	DDX42	99	71.684	ENSAPEG00000000984	ddx42	99	72.450	Amphiprion_percula
ENSCPBG00000026682	DDX42	99	71.667	ENSATEG00000022920	ddx42	99	72.984	Anabas_testudineus
ENSCPBG00000026682	DDX42	100	87.684	ENSAPLG00000010544	DDX42	100	87.053	Anas_platyrhynchos
ENSCPBG00000026682	DDX42	100	85.356	ENSACAG00000003994	DDX42	99	85.174	Anolis_carolinensis
ENSCPBG00000026682	DDX42	100	84.222	ENSANAG00000035693	DDX42	99	88.122	Aotus_nancymaae
ENSCPBG00000026682	DDX42	90	76.842	ENSACLG00000025113	ddx42	99	74.241	Astatotilapia_calliptera
ENSCPBG00000026682	DDX42	76	81.233	ENSAMXG00000011435	ddx42	99	69.459	Astyanax_mexicanus
ENSCPBG00000026682	DDX42	100	83.178	ENSBTAG00000021058	DDX42	97	89.316	Bos_taurus
ENSCPBG00000026682	DDX42	63	52.830	WBGene00008119	C46F11.4	69	57.570	Caenorhabditis_elegans
ENSCPBG00000026682	DDX42	100	84.342	ENSCJAG00000019649	DDX42	99	92.358	Callithrix_jacchus
ENSCPBG00000026682	DDX42	100	83.247	ENSCAFG00000012818	DDX42	100	84.623	Canis_familiaris
ENSCPBG00000026682	DDX42	100	83.351	ENSCAFG00020026631	DDX42	100	84.728	Canis_lupus_dingo
ENSCPBG00000026682	DDX42	100	83.665	ENSCHIG00000014431	DDX42	100	84.688	Capra_hircus
ENSCPBG00000026682	DDX42	100	83.196	ENSTSYG00000001380	DDX42	100	84.672	Carlito_syrichta
ENSCPBG00000026682	DDX42	72	69.913	ENSCAPG00000013621	DDX42	94	69.913	Cavia_aperea
ENSCPBG00000026682	DDX42	100	84.062	ENSCPOG00000005633	DDX42	100	84.013	Cavia_porcellus
ENSCPBG00000026682	DDX42	100	79.979	ENSCCAG00000020612	DDX42	97	89.250	Cebus_capucinus
ENSCPBG00000026682	DDX42	100	84.559	ENSCATG00000030490	DDX42	100	84.503	Cercocebus_atys
ENSCPBG00000026682	DDX42	100	84.672	ENSCLAG00000003497	DDX42	100	84.150	Chinchilla_lanigera
ENSCPBG00000026682	DDX42	100	79.590	ENSCSAG00000003914	DDX42	100	80.829	Chlorocebus_sabaeus
ENSCPBG00000026682	DDX42	79	90.179	ENSCHOG00000006241	DDX42	75	95.192	Choloepus_hoffmanni
ENSCPBG00000026682	DDX42	100	84.559	ENSCANG00000034663	DDX42	97	91.324	Colobus_angolensis_palliatus
ENSCPBG00000026682	DDX42	100	84.200	ENSCGRG00001009775	Ddx42	100	84.222	Cricetulus_griseus_chok1gshd
ENSCPBG00000026682	DDX42	100	84.200	ENSCGRG00000011718	Ddx42	100	84.222	Cricetulus_griseus_crigri
ENSCPBG00000026682	DDX42	90	74.122	ENSCSEG00000021574	ddx42	99	71.113	Cynoglossus_semilaevis
ENSCPBG00000026682	DDX42	99	70.105	ENSCVAG00000011404	ddx42	99	72.211	Cyprinodon_variegatus
ENSCPBG00000026682	DDX42	99	70.934	ENSDARG00000037928	ddx42	99	70.558	Danio_rerio
ENSCPBG00000026682	DDX42	100	78.077	ENSDNOG00000007961	DDX42	100	79.581	Dasypus_novemcinctus
ENSCPBG00000026682	DDX42	100	77.523	ENSDORG00000004199	Ddx42	100	77.211	Dipodomys_ordii
ENSCPBG00000026682	DDX42	65	60.737	FBgn0036104	CG6418	84	58.771	Drosophila_melanogaster
ENSCPBG00000026682	DDX42	83	70.960	ENSEBUG00000001155	ddx42	94	70.833	Eptatretus_burgeri
ENSCPBG00000026682	DDX42	100	83.386	ENSEASG00005013089	DDX42	99	89.341	Equus_asinus_asinus
ENSCPBG00000026682	DDX42	100	83.368	ENSECAG00000022684	DDX42	100	84.953	Equus_caballus
ENSCPBG00000026682	DDX42	58	92.731	ENSEEUG00000009144	DDX42	73	100.000	Erinaceus_europaeus
ENSCPBG00000026682	DDX42	99	69.719	ENSELUG00000020593	ddx42	99	69.615	Esox_lucius
ENSCPBG00000026682	DDX42	100	83.351	ENSFCAG00000003499	DDX42	100	85.042	Felis_catus
ENSCPBG00000026682	DDX42	96	83.843	ENSFALG00000004675	DDX42	89	82.581	Ficedula_albicollis
ENSCPBG00000026682	DDX42	100	84.287	ENSFDAG00000020516	DDX42	100	84.183	Fukomys_damarensis
ENSCPBG00000026682	DDX42	99	69.215	ENSFHEG00000023290	ddx42	99	71.309	Fundulus_heteroclitus
ENSCPBG00000026682	DDX42	75	77.292	ENSGMOG00000004595	ddx42	88	77.292	Gadus_morhua
ENSCPBG00000026682	DDX42	100	86.411	ENSGALG00000000581	DDX42	100	86.743	Gallus_gallus
ENSCPBG00000026682	DDX42	90	74.941	ENSGAFG00000011846	ddx42	96	74.261	Gambusia_affinis
ENSCPBG00000026682	DDX42	99	66.736	ENSGACG00000009782	ddx42	99	67.650	Gasterosteus_aculeatus
ENSCPBG00000026682	DDX42	100	98.639	ENSGAGG00000024411	DDX42	100	98.639	Gopherus_agassizii
ENSCPBG00000026682	DDX42	100	84.680	ENSGGOG00000006779	DDX42	97	89.392	Gorilla_gorilla
ENSCPBG00000026682	DDX42	90	76.842	ENSHBUG00000008705	ddx42	99	74.241	Haplochromis_burtoni
ENSCPBG00000026682	DDX42	100	80.167	ENSHGLG00000010024	DDX42	100	79.645	Heterocephalus_glaber_female
ENSCPBG00000026682	DDX42	100	82.937	ENSHGLG00100004479	-	100	84.205	Heterocephalus_glaber_male
ENSCPBG00000026682	DDX42	94	64.437	ENSHGLG00100007138	-	95	63.991	Heterocephalus_glaber_male
ENSCPBG00000026682	DDX42	82	79.385	ENSHCOG00000003357	ddx42	91	79.284	Hippocampus_comes
ENSCPBG00000026682	DDX42	79	79.156	ENSIPUG00000013327	ddx42	100	68.744	Ictalurus_punctatus
ENSCPBG00000026682	DDX42	100	84.864	ENSSTOG00000008922	DDX42	100	84.342	Ictidomys_tridecemlineatus
ENSCPBG00000026682	DDX42	100	84.029	ENSJJAG00000011727	Ddx42	100	83.612	Jaculus_jaculus
ENSCPBG00000026682	DDX42	82	79.949	ENSKMAG00000009914	ddx42	99	72.461	Kryptolebias_marmoratus
ENSCPBG00000026682	DDX42	80	75.844	ENSLBEG00000004687	ddx42	99	67.996	Labrus_bergylta
ENSCPBG00000026682	DDX42	99	75.422	ENSLACG00000013476	DDX42	97	76.632	Latimeria_chalumnae
ENSCPBG00000026682	DDX42	100	73.750	ENSLOCG00000011764	ddx42	100	75.316	Lepisosteus_oculatus
ENSCPBG00000026682	DDX42	100	84.100	ENSLAFG00000003249	DDX42	100	84.519	Loxodonta_africana
ENSCPBG00000026682	DDX42	100	84.454	ENSMFAG00000031356	DDX42	100	84.503	Macaca_fascicularis
ENSCPBG00000026682	DDX42	100	84.737	ENSMMUG00000016762	DDX42	96	89.235	Macaca_mulatta
ENSCPBG00000026682	DDX42	100	84.454	ENSMNEG00000038250	DDX42	100	84.503	Macaca_nemestrina
ENSCPBG00000026682	DDX42	100	83.093	ENSMLEG00000043080	DDX42	100	84.375	Mandrillus_leucophaeus
ENSCPBG00000026682	DDX42	90	77.140	ENSMAMG00000021888	ddx42	98	73.480	Mastacembelus_armatus
ENSCPBG00000026682	DDX42	90	76.842	ENSMZEG00005023103	ddx42	99	74.241	Maylandia_zebra
ENSCPBG00000026682	DDX42	100	87.683	ENSMGAG00000001822	DDX42	100	87.161	Meleagris_gallopavo
ENSCPBG00000026682	DDX42	77	88.661	ENSMAUG00000020774	-	94	87.842	Mesocricetus_auratus
ENSCPBG00000026682	DDX42	100	84.238	ENSMICG00000009952	DDX42	100	83.716	Microcebus_murinus
ENSCPBG00000026682	DDX42	100	84.414	ENSMOCG00000015504	Ddx42	100	83.787	Microtus_ochrogaster
ENSCPBG00000026682	DDX42	89	72.137	ENSMMOG00000016963	ddx42	87	71.574	Mola_mola
ENSCPBG00000026682	DDX42	99	71.203	ENSMALG00000007800	ddx42	99	72.708	Monopterus_albus
ENSCPBG00000026682	DDX42	100	83.801	MGP_CAROLIEiJ_G0017314	Ddx42	100	83.820	Mus_caroli
ENSCPBG00000026682	DDX42	100	83.593	ENSMUSG00000020705	Ddx42	100	83.716	Mus_musculus
ENSCPBG00000026682	DDX42	71	94.948	MGP_PahariEiJ_G0018444	-	94	95.195	Mus_pahari
ENSCPBG00000026682	DDX42	100	83.801	MGP_SPRETEiJ_G0018158	Ddx42	100	83.820	Mus_spretus
ENSCPBG00000026682	DDX42	100	82.631	ENSMPUG00000014921	DDX42	100	84.304	Mustela_putorius_furo
ENSCPBG00000026682	DDX42	100	83.505	ENSMLUG00000011645	DDX42	100	84.156	Myotis_lucifugus
ENSCPBG00000026682	DDX42	100	85.399	ENSNGAG00000021897	Ddx42	100	84.769	Nannospalax_galili
ENSCPBG00000026682	DDX42	90	75.176	ENSNBRG00000004466	ddx42	99	72.851	Neolamprologus_brichardi
ENSCPBG00000026682	DDX42	100	84.575	ENSNLEG00000004248	DDX42	99	89.250	Nomascus_leucogenys
ENSCPBG00000026682	DDX42	74	80.069	ENSMEUG00000013227	-	85	79.210	Notamacropus_eugenii
ENSCPBG00000026682	DDX42	100	83.212	ENSOPRG00000014960	DDX42	100	83.542	Ochotona_princeps
ENSCPBG00000026682	DDX42	100	81.230	ENSODEG00000007810	DDX42	100	80.709	Octodon_degus
ENSCPBG00000026682	DDX42	90	76.698	ENSONIG00000000734	ddx42	99	74.109	Oreochromis_niloticus
ENSCPBG00000026682	DDX42	57	91.837	ENSOANG00000000265	DDX42	100	91.837	Ornithorhynchus_anatinus
ENSCPBG00000026682	DDX42	93	86.577	ENSOCUG00000004304	DDX42	87	85.825	Oryctolagus_cuniculus
ENSCPBG00000026682	DDX42	100	71.324	ENSORLG00000002395	ddx42	100	70.021	Oryzias_latipes
ENSCPBG00000026682	DDX42	100	71.668	ENSORLG00020011621	ddx42	100	72.584	Oryzias_latipes_hni
ENSCPBG00000026682	DDX42	100	71.878	ENSORLG00015004487	ddx42	100	72.794	Oryzias_latipes_hsok
ENSCPBG00000026682	DDX42	100	71.218	ENSOMEG00000020093	ddx42	100	72.670	Oryzias_melastigma
ENSCPBG00000026682	DDX42	100	82.887	ENSOGAG00000006872	DDX42	100	84.150	Otolemur_garnettii
ENSCPBG00000026682	DDX42	100	81.911	ENSOARG00000013540	DDX42	100	84.058	Ovis_aries
ENSCPBG00000026682	DDX42	100	84.575	ENSPPAG00000007496	DDX42	97	89.174	Pan_paniscus
ENSCPBG00000026682	DDX42	100	83.454	ENSPPRG00000002740	DDX42	100	85.146	Panthera_pardus
ENSCPBG00000026682	DDX42	100	83.454	ENSPTIG00000009932	DDX42	100	85.042	Panthera_tigris_altaica
ENSCPBG00000026682	DDX42	100	84.575	ENSPTRG00000009523	DDX42	97	89.174	Pan_troglodytes
ENSCPBG00000026682	DDX42	100	84.454	ENSPANG00000020990	DDX42	100	84.398	Papio_anubis
ENSCPBG00000026682	DDX42	79	81.891	ENSPKIG00000002901	ddx42	99	68.926	Paramormyrops_kingsleyae
ENSCPBG00000026682	DDX42	86	96.350	ENSPSIG00000010289	DDX42	99	96.350	Pelodiscus_sinensis
ENSCPBG00000026682	DDX42	100	66.912	ENSPMGG00000009323	ddx42	100	68.449	Periophthalmus_magnuspinnatus
ENSCPBG00000026682	DDX42	100	84.112	ENSPEMG00000006755	Ddx42	100	84.342	Peromyscus_maniculatus_bairdii
ENSCPBG00000026682	DDX42	79	72.775	ENSPMAG00000005580	ddx42	100	73.691	Petromyzon_marinus
ENSCPBG00000026682	DDX42	100	84.528	ENSPCIG00000009093	DDX42	100	84.216	Phascolarctos_cinereus
ENSCPBG00000026682	DDX42	99	70.443	ENSPFOG00000014104	ddx42	99	72.652	Poecilia_formosa
ENSCPBG00000026682	DDX42	99	70.443	ENSPLAG00000010522	ddx42	99	72.652	Poecilia_latipinna
ENSCPBG00000026682	DDX42	99	70.237	ENSPMEG00000010744	ddx42	99	72.016	Poecilia_mexicana
ENSCPBG00000026682	DDX42	99	69.547	ENSPREG00000009926	ddx42	99	71.546	Poecilia_reticulata
ENSCPBG00000026682	DDX42	100	81.535	ENSPPYG00000008531	DDX42	100	82.073	Pongo_abelii
ENSCPBG00000026682	DDX42	92	77.765	ENSPCAG00000002474	DDX42	100	79.525	Procavia_capensis
ENSCPBG00000026682	DDX42	100	73.554	ENSPCOG00000001559	DDX42	98	81.159	Propithecus_coquereli
ENSCPBG00000026682	DDX42	100	82.255	ENSPVAG00000000160	DDX42	100	82.046	Pteropus_vampyrus
ENSCPBG00000026682	DDX42	74	74.648	ENSPNYG00000013954	ddx42	97	71.693	Pundamilia_nyererei
ENSCPBG00000026682	DDX42	79	77.378	ENSPNAG00000017352	ddx42	99	68.744	Pygocentrus_nattereri
ENSCPBG00000026682	DDX42	100	84.008	ENSRNOG00000009474	Ddx42	100	84.029	Rattus_norvegicus
ENSCPBG00000026682	DDX42	100	84.559	ENSRBIG00000004781	DDX42	97	91.324	Rhinopithecus_bieti
ENSCPBG00000026682	DDX42	100	84.559	ENSRROG00000029794	DDX42	100	84.503	Rhinopithecus_roxellana
ENSCPBG00000026682	DDX42	100	84.447	ENSSBOG00000029624	DDX42	97	89.392	Saimiri_boliviensis_boliviensis
ENSCPBG00000026682	DDX42	71	57.413	ENSSHAG00000007919	-	99	56.541	Sarcophilus_harrisii
ENSCPBG00000026682	DDX42	100	85.389	ENSSHAG00000012896	-	100	84.974	Sarcophilus_harrisii
ENSCPBG00000026682	DDX42	80	82.260	ENSSFOG00015014064	ddx42	81	81.997	Scleropages_formosus
ENSCPBG00000026682	DDX42	99	71.354	ENSSMAG00000009077	ddx42	98	73.368	Scophthalmus_maximus
ENSCPBG00000026682	DDX42	99	71.130	ENSSDUG00000022221	ddx42	99	72.680	Seriola_dumerili
ENSCPBG00000026682	DDX42	99	70.601	ENSSLDG00000018483	ddx42	99	71.593	Seriola_lalandi_dorsalis
ENSCPBG00000026682	DDX42	100	83.874	ENSSARG00000009847	DDX42	100	84.205	Sorex_araneus
ENSCPBG00000026682	DDX42	100	89.380	ENSSPUG00000018806	DDX42	100	88.959	Sphenodon_punctatus
ENSCPBG00000026682	DDX42	90	76.135	ENSSPAG00000013055	ddx42	99	73.326	Stegastes_partitus
ENSCPBG00000026682	DDX42	86	80.879	ENSSSCG00000017289	DDX42	97	82.509	Sus_scrofa
ENSCPBG00000026682	DDX42	100	85.506	ENSTGUG00000001931	DDX42	100	84.880	Taeniopygia_guttata
ENSCPBG00000026682	DDX42	99	69.821	ENSTRUG00000010711	ddx42	99	82.000	Takifugu_rubripes
ENSCPBG00000026682	DDX42	80	88.845	ENSTBEG00000010159	DDX42	100	88.451	Tupaia_belangeri
ENSCPBG00000026682	DDX42	100	84.096	ENSTTRG00000006962	DDX42	100	84.551	Tursiops_truncatus
ENSCPBG00000026682	DDX42	100	85.162	ENSUAMG00000007321	DDX42	100	84.848	Ursus_americanus
ENSCPBG00000026682	DDX42	100	84.995	ENSUMAG00000017438	DDX42	100	84.680	Ursus_maritimus
ENSCPBG00000026682	DDX42	100	73.635	ENSVPAG00000009633	DDX42	100	75.235	Vicugna_pacos
ENSCPBG00000026682	DDX42	100	83.247	ENSVVUG00000006095	DDX42	100	84.937	Vulpes_vulpes
ENSCPBG00000026682	DDX42	100	76.161	ENSXETG00000003245	ddx42	100	76.225	Xenopus_tropicalis
ENSCPBG00000026682	DDX42	85	71.092	ENSXCOG00000017560	ddx42	97	71.995	Xiphophorus_couchianus
ENSCPBG00000026682	DDX42	99	71.609	ENSXMAG00000008138	ddx42	99	72.689	Xiphophorus_maculatus