EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026801 (Gene tree)
Gene ID: 101932999
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 3820 bases
Position: chrKK083013.1:187543-191362
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038812	LSM	PF01423.22	7.5e-20	1	1
ENSCPBP00000038813	LSM	PF01423.22	8.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045499	SNRPB-201	1203	-	ENSCPBP00000038812	230 (aa)	-	-
ENSCPBT00000045500	SNRPB-202	894	-	ENSCPBP00000038813	240 (aa)	XP_005304875	UPI00038914E4

Gene Model

Click here to download ENSCPBG00000026801's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026801	SNRPB	100	96.667	ENSG00000125835	SNRPB	100	96.667	Homo_sapiens
ENSCPBG00000026801	SNRPB	79	93.923	ENSAPOG00000019606	snrpb	56	96.429	Acanthochromis_polyacanthus
ENSCPBG00000026801	SNRPB	99	96.653	ENSAMEG00000011353	SNRPB	98	96.653	Ailuropoda_melanoleuca
ENSCPBG00000026801	SNRPB	76	93.714	ENSACIG00000014480	snrpb	71	96.296	Amphilophus_citrinellus
ENSCPBG00000026801	SNRPB	79	93.923	ENSAOCG00000006876	snrpb	69	96.429	Amphiprion_ocellaris
ENSCPBG00000026801	SNRPB	79	93.923	ENSAPEG00000021585	snrpb	71	96.429	Amphiprion_percula
ENSCPBG00000026801	SNRPB	79	93.370	ENSATEG00000009836	snrpb	69	95.833	Anabas_testudineus
ENSCPBG00000026801	SNRPB	97	98.276	ENSACAG00000002053	SNRPB	100	98.276	Anolis_carolinensis
ENSCPBG00000026801	SNRPB	100	96.667	ENSANAG00000024443	-	100	96.667	Aotus_nancymaae
ENSCPBG00000026801	SNRPB	96	89.177	ENSANAG00000036271	-	76	89.947	Aotus_nancymaae
ENSCPBG00000026801	SNRPB	79	93.923	ENSACLG00000014707	snrpb	69	96.429	Astatotilapia_calliptera
ENSCPBG00000026801	SNRPB	80	93.989	ENSAMXG00000029434	snrpb	70	95.833	Astyanax_mexicanus
ENSCPBG00000026801	SNRPB	99	96.070	ENSBTAG00000001038	SNRPB	99	96.070	Bos_taurus
ENSCPBG00000026801	SNRPB	99	96.507	ENSCJAG00000020971	-	99	96.507	Callithrix_jacchus
ENSCPBG00000026801	SNRPB	93	88.318	ENSCJAG00000023097	-	79	88.889	Callithrix_jacchus
ENSCPBG00000026801	SNRPB	99	96.507	ENSCAFG00000006693	-	99	96.507	Canis_familiaris
ENSCPBG00000026801	SNRPB	80	84.946	ENSCAFG00000031109	-	79	82.105	Canis_familiaris
ENSCPBG00000026801	SNRPB	100	96.667	ENSCAFG00020016981	-	100	96.667	Canis_lupus_dingo
ENSCPBG00000026801	SNRPB	99	96.070	ENSCHIG00000025449	-	99	96.070	Capra_hircus
ENSCPBG00000026801	SNRPB	100	96.087	ENSTSYG00000014498	-	99	96.507	Carlito_syrichta
ENSCPBG00000026801	SNRPB	98	73.778	ENSTSYG00000032303	-	55	76.667	Carlito_syrichta
ENSCPBG00000026801	SNRPB	99	96.653	ENSCAPG00000012669	SNRPB	99	96.653	Cavia_aperea
ENSCPBG00000026801	SNRPB	99	96.507	ENSCPOG00000039408	SNRPB	99	96.507	Cavia_porcellus
ENSCPBG00000026801	SNRPB	55	84.252	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSCPBG00000026801	SNRPB	100	96.667	ENSCCAG00000026002	SNRPB	100	96.667	Cebus_capucinus
ENSCPBG00000026801	SNRPB	99	96.507	ENSCATG00000030230	SNRPB	99	96.507	Cercocebus_atys
ENSCPBG00000026801	SNRPB	100	95.417	ENSCLAG00000012442	SNRPB	100	95.417	Chinchilla_lanigera
ENSCPBG00000026801	SNRPB	99	96.507	ENSCSAG00000010840	SNRPB	99	96.507	Chlorocebus_sabaeus
ENSCPBG00000026801	SNRPB	100	96.667	ENSCANG00000019461	SNRPB	100	96.667	Colobus_angolensis_palliatus
ENSCPBG00000026801	SNRPB	99	96.507	ENSCGRG00001023046	Snrpb	99	96.507	Cricetulus_griseus_chok1gshd
ENSCPBG00000026801	SNRPB	97	96.396	ENSCGRG00000010423	Snrpb	99	96.396	Cricetulus_griseus_crigri
ENSCPBG00000026801	SNRPB	80	93.443	ENSCSEG00000020328	snrpb	70	96.429	Cynoglossus_semilaevis
ENSCPBG00000026801	SNRPB	99	96.943	ENSDARG00000011125	snrpb	95	96.943	Danio_rerio
ENSCPBG00000026801	SNRPB	100	96.667	ENSDNOG00000015545	-	100	96.667	Dasypus_novemcinctus
ENSCPBG00000026801	SNRPB	96	91.855	ENSDNOG00000007896	-	91	91.855	Dasypus_novemcinctus
ENSCPBG00000026801	SNRPB	96	96.087	ENSDORG00000029558	Snrpb	100	96.087	Dipodomys_ordii
ENSCPBG00000026801	SNRPB	65	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSCPBG00000026801	SNRPB	80	77.049	ENSETEG00000006830	SNRPB	74	76.190	Echinops_telfairi
ENSCPBG00000026801	SNRPB	79	81.183	ENSEBUG00000007467	SNRPB	62	89.933	Eptatretus_burgeri
ENSCPBG00000026801	SNRPB	99	96.070	ENSEASG00005012991	SNRPB	99	96.070	Equus_asinus_asinus
ENSCPBG00000026801	SNRPB	100	96.522	ENSECAG00000011944	SNRPB	99	96.507	Equus_caballus
ENSCPBG00000026801	SNRPB	98	96.460	ENSEEUG00000015568	SNRPB	80	96.460	Erinaceus_europaeus
ENSCPBG00000026801	SNRPB	100	96.250	ENSELUG00000014564	snrpb	100	96.250	Esox_lucius
ENSCPBG00000026801	SNRPB	99	96.507	ENSFCAG00000034090	-	99	96.507	Felis_catus
ENSCPBG00000026801	SNRPB	97	99.569	ENSFALG00000004866	SNRPB	100	99.569	Ficedula_albicollis
ENSCPBG00000026801	SNRPB	99	96.653	ENSFDAG00000009937	SNRPB	99	96.507	Fukomys_damarensis
ENSCPBG00000026801	SNRPB	100	99.583	ENSGALG00000035421	SNRPN	100	99.583	Gallus_gallus
ENSCPBG00000026801	SNRPB	75	94.186	ENSGAFG00000019558	snrpb	72	95.808	Gambusia_affinis
ENSCPBG00000026801	SNRPB	80	92.896	ENSGACG00000003262	snrpb	70	96.429	Gasterosteus_aculeatus
ENSCPBG00000026801	SNRPB	100	100.000	ENSGAGG00000001308	SNRPB	100	100.000	Gopherus_agassizii
ENSCPBG00000026801	SNRPB	99	96.507	ENSGGOG00000016138	SNRPB	99	96.507	Gorilla_gorilla
ENSCPBG00000026801	SNRPB	79	93.923	ENSHBUG00000008369	snrpb	69	96.429	Haplochromis_burtoni
ENSCPBG00000026801	SNRPB	99	96.507	ENSHGLG00000016241	-	99	96.507	Heterocephalus_glaber_female
ENSCPBG00000026801	SNRPB	65	86.667	ENSHGLG00000016505	-	72	86.667	Heterocephalus_glaber_female
ENSCPBG00000026801	SNRPB	100	96.667	ENSHGLG00100012877	-	100	96.667	Heterocephalus_glaber_male
ENSCPBG00000026801	SNRPB	65	86.667	ENSHGLG00100004178	-	72	86.667	Heterocephalus_glaber_male
ENSCPBG00000026801	SNRPB	80	93.443	ENSHCOG00000014888	snrpb	70	96.429	Hippocampus_comes
ENSCPBG00000026801	SNRPB	100	97.083	ENSIPUG00000024569	SNRPB	100	97.083	Ictalurus_punctatus
ENSCPBG00000026801	SNRPB	94	77.778	ENSSTOG00000027821	-	62	95.588	Ictidomys_tridecemlineatus
ENSCPBG00000026801	SNRPB	96	94.570	ENSSTOG00000033664	-	92	94.570	Ictidomys_tridecemlineatus
ENSCPBG00000026801	SNRPB	99	96.507	ENSJJAG00000024170	Snrpb	99	96.507	Jaculus_jaculus
ENSCPBG00000026801	SNRPB	75	95.376	ENSKMAG00000014494	snrpb	68	97.024	Kryptolebias_marmoratus
ENSCPBG00000026801	SNRPB	80	93.443	ENSLBEG00000005678	snrpb	70	96.429	Labrus_bergylta
ENSCPBG00000026801	SNRPB	96	95.475	ENSLACG00000011459	SNRPB	92	95.475	Latimeria_chalumnae
ENSCPBG00000026801	SNRPB	100	97.500	ENSLOCG00000002687	snrpb	100	97.500	Lepisosteus_oculatus
ENSCPBG00000026801	SNRPB	96	92.273	ENSLAFG00000017588	SNRPB	95	92.273	Loxodonta_africana
ENSCPBG00000026801	SNRPB	99	96.507	ENSMFAG00000038756	SNRPB	99	96.507	Macaca_fascicularis
ENSCPBG00000026801	SNRPB	99	96.507	ENSMMUG00000010050	SNRPB	99	96.507	Macaca_mulatta
ENSCPBG00000026801	SNRPB	99	96.507	ENSMNEG00000027954	SNRPB	99	96.507	Macaca_nemestrina
ENSCPBG00000026801	SNRPB	100	96.667	ENSMLEG00000022346	SNRPB	100	96.667	Mandrillus_leucophaeus
ENSCPBG00000026801	SNRPB	78	93.889	ENSMAMG00000009294	snrpb	67	96.407	Mastacembelus_armatus
ENSCPBG00000026801	SNRPB	79	93.923	ENSMZEG00005011856	snrpb	69	96.429	Maylandia_zebra
ENSCPBG00000026801	SNRPB	94	82.222	ENSMICG00000015983	-	87	86.772	Microcebus_murinus
ENSCPBG00000026801	SNRPB	99	96.070	ENSMICG00000016519	SNRPB	99	96.070	Microcebus_murinus
ENSCPBG00000026801	SNRPB	100	95.652	ENSMOCG00000002892	-	99	96.070	Microtus_ochrogaster
ENSCPBG00000026801	SNRPB	73	76.000	ENSMOCG00000021362	-	73	70.857	Microtus_ochrogaster
ENSCPBG00000026801	SNRPB	79	93.407	ENSMMOG00000013226	snrpb	71	96.407	Mola_mola
ENSCPBG00000026801	SNRPB	79	93.370	ENSMALG00000020839	snrpb	56	95.833	Monopterus_albus
ENSCPBG00000026801	SNRPB	99	96.507	MGP_CAROLIEiJ_G0024293	Snrpb	99	96.507	Mus_caroli
ENSCPBG00000026801	SNRPB	99	96.507	ENSMUSG00000027404	Snrpb	99	96.507	Mus_musculus
ENSCPBG00000026801	SNRPB	99	96.507	MGP_PahariEiJ_G0025738	Snrpb	99	96.507	Mus_pahari
ENSCPBG00000026801	SNRPB	99	96.507	MGP_SPRETEiJ_G0025213	Snrpb	99	96.507	Mus_spretus
ENSCPBG00000026801	SNRPB	99	96.507	ENSMPUG00000009283	SNRPB	99	96.507	Mustela_putorius_furo
ENSCPBG00000026801	SNRPB	96	93.213	ENSMLUG00000016951	SNRPB	92	93.213	Myotis_lucifugus
ENSCPBG00000026801	SNRPB	99	96.507	ENSNGAG00000012051	Snrpb	99	96.507	Nannospalax_galili
ENSCPBG00000026801	SNRPB	79	91.160	ENSNBRG00000006353	snrpb	62	95.122	Neolamprologus_brichardi
ENSCPBG00000026801	SNRPB	100	96.667	ENSNLEG00000029067	SNRPB	100	96.667	Nomascus_leucogenys
ENSCPBG00000026801	SNRPB	98	96.444	ENSMEUG00000015625	SNRPB	100	96.444	Notamacropus_eugenii
ENSCPBG00000026801	SNRPB	99	96.507	ENSODEG00000004305	-	99	96.507	Octodon_degus
ENSCPBG00000026801	SNRPB	82	92.063	ENSODEG00000016060	-	79	93.122	Octodon_degus
ENSCPBG00000026801	SNRPB	79	93.923	ENSONIG00000000248	snrpb	69	96.429	Oreochromis_niloticus
ENSCPBG00000026801	SNRPB	93	69.014	ENSOCUG00000026813	-	63	67.568	Oryctolagus_cuniculus
ENSCPBG00000026801	SNRPB	95	93.392	ENSOCUG00000028215	-	79	94.180	Oryctolagus_cuniculus
ENSCPBG00000026801	SNRPB	100	96.250	ENSOCUG00000014042	-	100	96.250	Oryctolagus_cuniculus
ENSCPBG00000026801	SNRPB	78	89.944	ENSOCUG00000022423	-	86	93.452	Oryctolagus_cuniculus
ENSCPBG00000026801	SNRPB	93	91.163	ENSOCUG00000021456	-	78	92.593	Oryctolagus_cuniculus
ENSCPBG00000026801	SNRPB	79	93.370	ENSORLG00000021862	snrpb	69	96.429	Oryzias_latipes
ENSCPBG00000026801	SNRPB	100	96.667	ENSOGAG00000016149	SNRPB	100	96.667	Otolemur_garnettii
ENSCPBG00000026801	SNRPB	99	96.070	ENSOARG00000006740	SNRPB	99	96.070	Ovis_aries
ENSCPBG00000026801	SNRPB	99	96.507	ENSPPAG00000036314	SNRPB	99	96.507	Pan_paniscus
ENSCPBG00000026801	SNRPB	100	96.667	ENSPPRG00000003233	-	100	96.667	Panthera_pardus
ENSCPBG00000026801	SNRPB	99	96.653	ENSPTIG00000007468	SNRPB	99	96.653	Panthera_tigris_altaica
ENSCPBG00000026801	SNRPB	99	96.507	ENSPTRG00000013176	SNRPB	99	96.507	Pan_troglodytes
ENSCPBG00000026801	SNRPB	100	96.667	ENSPANG00000020362	SNRPB	100	96.667	Papio_anubis
ENSCPBG00000026801	SNRPB	100	96.250	ENSPKIG00000002865	snrpb	100	96.250	Paramormyrops_kingsleyae
ENSCPBG00000026801	SNRPB	99	100.000	ENSPSIG00000014125	SNRPB	98	100.000	Pelodiscus_sinensis
ENSCPBG00000026801	SNRPB	77	91.573	ENSPMGG00000016349	snrpb	69	93.865	Periophthalmus_magnuspinnatus
ENSCPBG00000026801	SNRPB	99	96.507	ENSPEMG00000007948	Snrpb	99	96.507	Peromyscus_maniculatus_bairdii
ENSCPBG00000026801	SNRPB	99	96.653	ENSPCIG00000004694	SNRPB	99	96.653	Phascolarctos_cinereus
ENSCPBG00000026801	SNRPB	83	77.895	ENSPLAG00000014130	snrpb	59	97.778	Poecilia_latipinna
ENSCPBG00000026801	SNRPB	83	78.421	ENSPREG00000015515	snrpb	62	97.778	Poecilia_reticulata
ENSCPBG00000026801	SNRPB	99	96.507	ENSPPYG00000010841	SNRPB	99	96.507	Pongo_abelii
ENSCPBG00000026801	SNRPB	99	96.507	ENSPCOG00000013686	SNRPB	99	96.507	Propithecus_coquereli
ENSCPBG00000026801	SNRPB	96	95.475	ENSPVAG00000017013	SNRPB	77	95.475	Pteropus_vampyrus
ENSCPBG00000026801	SNRPB	79	93.923	ENSPNYG00000014788	snrpb	69	96.429	Pundamilia_nyererei
ENSCPBG00000026801	SNRPB	77	94.350	ENSPNAG00000016126	snrpb	70	96.429	Pygocentrus_nattereri
ENSCPBG00000026801	SNRPB	99	96.507	ENSRNOG00000006961	Snrpb	99	96.507	Rattus_norvegicus
ENSCPBG00000026801	SNRPB	100	96.250	ENSRBIG00000040505	SNRPB	100	96.250	Rhinopithecus_bieti
ENSCPBG00000026801	SNRPB	100	96.667	ENSRROG00000036094	SNRPB	100	96.667	Rhinopithecus_roxellana
ENSCPBG00000026801	SNRPB	100	96.667	ENSSBOG00000027310	SNRPB	100	96.667	Saimiri_boliviensis_boliviensis
ENSCPBG00000026801	SNRPB	100	97.500	ENSSHAG00000010394	SNRPB	100	97.500	Sarcophilus_harrisii
ENSCPBG00000026801	SNRPB	73	94.048	ENSSFOG00015002870	snrpb	70	95.238	Scleropages_formosus
ENSCPBG00000026801	SNRPB	99	95.798	ENSSMAG00000006766	snrpb	99	95.798	Scophthalmus_maximus
ENSCPBG00000026801	SNRPB	79	93.923	ENSSDUG00000018539	snrpb	69	96.429	Seriola_dumerili
ENSCPBG00000026801	SNRPB	79	93.923	ENSSLDG00000022391	snrpb	69	96.429	Seriola_lalandi_dorsalis
ENSCPBG00000026801	SNRPB	96	84.545	ENSSARG00000003084	SNRPB	94	84.545	Sorex_araneus
ENSCPBG00000026801	SNRPB	99	100.000	ENSSPUG00000015659	SNRPB	100	100.000	Sphenodon_punctatus
ENSCPBG00000026801	SNRPB	79	93.923	ENSSPAG00000021992	snrpb	69	96.429	Stegastes_partitus
ENSCPBG00000026801	SNRPB	99	96.070	ENSSSCG00000040857	-	99	96.070	Sus_scrofa
ENSCPBG00000026801	SNRPB	99	76.856	ENSSSCG00000011966	-	77	71.585	Sus_scrofa
ENSCPBG00000026801	SNRPB	77	81.921	ENSTGUG00000005684	SNRPB	59	99.286	Taeniopygia_guttata
ENSCPBG00000026801	SNRPB	99	95.633	ENSTRUG00000023094	snrpb	99	95.633	Takifugu_rubripes
ENSCPBG00000026801	SNRPB	99	95.798	ENSTNIG00000002991	snrpb	99	95.798	Tetraodon_nigroviridis
ENSCPBG00000026801	SNRPB	76	96.571	ENSUAMG00000005984	-	84	96.571	Ursus_americanus
ENSCPBG00000026801	SNRPB	60	95.620	ENSUMAG00000002123	-	63	95.620	Ursus_maritimus
ENSCPBG00000026801	SNRPB	100	96.250	ENSVVUG00000025654	-	100	96.250	Vulpes_vulpes
ENSCPBG00000026801	SNRPB	98	76.652	ENSVVUG00000010086	-	85	78.571	Vulpes_vulpes
ENSCPBG00000026801	SNRPB	100	95.833	ENSXETG00000027266	snrpb	100	95.833	Xenopus_tropicalis
ENSCPBG00000026801	SNRPB	74	80.702	ENSXMAG00000028767	snrpb	58	97.778	Xiphophorus_maculatus