EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000026880 (Gene tree)
Gene ID: 101934192
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 76267 bases
Position: chrKK088224.1:3999550-4075816
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000038964	zf-C2H2	PF00096.26	2.7e-32	1	4
ENSCPBP00000038964	zf-C2H2	PF00096.26	2.7e-32	2	4
ENSCPBP00000038964	zf-C2H2	PF00096.26	2.7e-32	3	4
ENSCPBP00000038964	zf-C2H2	PF00096.26	2.7e-32	4	4
ENSCPBP00000038961	zf-C2H2	PF00096.26	2.8e-32	1	4
ENSCPBP00000038961	zf-C2H2	PF00096.26	2.8e-32	2	4
ENSCPBP00000038961	zf-C2H2	PF00096.26	2.8e-32	3	4
ENSCPBP00000038961	zf-C2H2	PF00096.26	2.8e-32	4	4
ENSCPBP00000038968	zf-C2H2	PF00096.26	6.1e-30	1	4
ENSCPBP00000038968	zf-C2H2	PF00096.26	6.1e-30	2	4
ENSCPBP00000038968	zf-C2H2	PF00096.26	6.1e-30	3	4
ENSCPBP00000038968	zf-C2H2	PF00096.26	6.1e-30	4	4
ENSCPBP00000038968	zf-met	PF12874.7	1.3e-05	1	2
ENSCPBP00000038968	zf-met	PF12874.7	1.3e-05	2	2
ENSCPBP00000038964	zf-met	PF12874.7	2.1e-05	1	2
ENSCPBP00000038964	zf-met	PF12874.7	2.1e-05	2	2
ENSCPBP00000038961	zf-met	PF12874.7	2.1e-05	1	2
ENSCPBP00000038961	zf-met	PF12874.7	2.1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045672	PRDM10-202	4548	-	ENSCPBP00000038964	1207 (aa)	XP_023957662	UPI00046C364B
ENSCPBT00000045667	PRDM10-201	4560	-	ENSCPBP00000038961	1211 (aa)	XP_023957661	UPI00046C02A8
ENSCPBT00000045676	PRDM10-203	3162	-	ENSCPBP00000038968	1042 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000026880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026880	PRDM10	99	82.255	ENSG00000170325	PRDM10	99	85.977	Homo_sapiens
ENSCPBG00000026880	PRDM10	99	83.014	ENSAMEG00000002425	PRDM10	100	83.514	Ailuropoda_melanoleuca
ENSCPBG00000026880	PRDM10	99	92.443	ENSAPLG00000004858	PRDM10	100	91.772	Anas_platyrhynchos
ENSCPBG00000026880	PRDM10	98	72.131	ENSANAG00000022064	PRDM10	100	69.562	Aotus_nancymaae
ENSCPBG00000026880	PRDM10	99	81.629	ENSBTAG00000019001	PRDM10	100	84.863	Bos_taurus
ENSCPBG00000026880	PRDM10	99	82.407	ENSCJAG00000009235	PRDM10	100	82.681	Callithrix_jacchus
ENSCPBG00000026880	PRDM10	99	80.984	ENSCAFG00000010164	PRDM10	100	81.234	Canis_familiaris
ENSCPBG00000026880	PRDM10	99	80.000	ENSCAFG00020010152	PRDM10	100	83.647	Canis_lupus_dingo
ENSCPBG00000026880	PRDM10	99	81.818	ENSCHIG00000026530	PRDM10	100	81.985	Capra_hircus
ENSCPBG00000026880	PRDM10	99	82.670	ENSTSYG00000000544	PRDM10	100	83.028	Carlito_syrichta
ENSCPBG00000026880	PRDM10	99	72.690	ENSCAPG00000017296	PRDM10	98	79.960	Cavia_aperea
ENSCPBG00000026880	PRDM10	88	82.716	ENSCPOG00000000389	PRDM10	97	82.716	Cavia_porcellus
ENSCPBG00000026880	PRDM10	99	82.241	ENSCCAG00000024567	PRDM10	100	82.656	Cebus_capucinus
ENSCPBG00000026880	PRDM10	99	82.667	ENSCATG00000040031	PRDM10	100	82.833	Cercocebus_atys
ENSCPBG00000026880	PRDM10	99	80.182	ENSCLAG00000014605	PRDM10	99	83.663	Chinchilla_lanigera
ENSCPBG00000026880	PRDM10	99	82.583	ENSCSAG00000002202	PRDM10	100	83.083	Chlorocebus_sabaeus
ENSCPBG00000026880	PRDM10	99	82.490	ENSCANG00000032669	PRDM10	100	82.573	Colobus_angolensis_palliatus
ENSCPBG00000026880	PRDM10	99	80.480	ENSCGRG00001021647	Prdm10	97	84.501	Cricetulus_griseus_chok1gshd
ENSCPBG00000026880	PRDM10	99	80.480	ENSCGRG00000006562	Prdm10	97	84.501	Cricetulus_griseus_crigri
ENSCPBG00000026880	PRDM10	81	84.686	ENSDNOG00000001366	PRDM10	95	84.686	Dasypus_novemcinctus
ENSCPBG00000026880	PRDM10	99	81.151	ENSDORG00000014292	Prdm10	99	84.630	Dipodomys_ordii
ENSCPBG00000026880	PRDM10	99	82.319	ENSEASG00005022914	PRDM10	99	84.510	Equus_asinus_asinus
ENSCPBG00000026880	PRDM10	99	82.402	ENSECAG00000011499	PRDM10	99	86.428	Equus_caballus
ENSCPBG00000026880	PRDM10	97	82.923	ENSFCAG00000004111	PRDM10	96	83.432	Felis_catus
ENSCPBG00000026880	PRDM10	99	92.869	ENSFALG00000004873	PRDM10	100	92.198	Ficedula_albicollis
ENSCPBG00000026880	PRDM10	96	82.891	ENSFDAG00000017311	PRDM10	97	85.526	Fukomys_damarensis
ENSCPBG00000026880	PRDM10	100	94.449	ENSGALG00000033660	PRDM10	100	94.118	Gallus_gallus
ENSCPBG00000026880	PRDM10	88	73.750	ENSGACG00000012293	prdm10	98	73.750	Gasterosteus_aculeatus
ENSCPBG00000026880	PRDM10	100	97.525	ENSGAGG00000012523	PRDM10	100	97.525	Gopherus_agassizii
ENSCPBG00000026880	PRDM10	99	82.436	ENSGGOG00000015359	PRDM10	100	82.793	Gorilla_gorilla
ENSCPBG00000026880	PRDM10	99	80.296	ENSHGLG00000001106	PRDM10	99	85.119	Heterocephalus_glaber_female
ENSCPBG00000026880	PRDM10	99	80.510	ENSHGLG00100002350	PRDM10	99	85.119	Heterocephalus_glaber_male
ENSCPBG00000026880	PRDM10	99	82.098	ENSSTOG00000002015	PRDM10	100	82.598	Ictidomys_tridecemlineatus
ENSCPBG00000026880	PRDM10	96	71.945	ENSJJAG00000021493	Prdm10	90	80.731	Jaculus_jaculus
ENSCPBG00000026880	PRDM10	99	79.404	ENSLAFG00000031867	PRDM10	100	79.735	Loxodonta_africana
ENSCPBG00000026880	PRDM10	99	82.558	ENSMFAG00000031008	PRDM10	100	83.056	Macaca_fascicularis
ENSCPBG00000026880	PRDM10	99	82.558	ENSMMUG00000017555	PRDM10	100	83.056	Macaca_mulatta
ENSCPBG00000026880	PRDM10	99	82.475	ENSMNEG00000036493	PRDM10	100	82.973	Macaca_nemestrina
ENSCPBG00000026880	PRDM10	90	81.646	ENSMLEG00000042028	PRDM10	99	81.646	Mandrillus_leucophaeus
ENSCPBG00000026880	PRDM10	99	93.955	ENSMGAG00000001112	PRDM10	100	93.619	Meleagris_gallopavo
ENSCPBG00000026880	PRDM10	99	82.724	ENSMICG00000013888	PRDM10	100	82.890	Microcebus_murinus
ENSCPBG00000026880	PRDM10	99	79.201	ENSMOCG00000021853	Prdm10	100	84.515	Microtus_ochrogaster
ENSCPBG00000026880	PRDM10	79	84.467	ENSMODG00000004979	PRDM10	99	89.456	Monodelphis_domestica
ENSCPBG00000026880	PRDM10	99	79.527	ENSMUSG00000042496	Prdm10	96	85.903	Mus_musculus
ENSCPBG00000026880	PRDM10	99	81.146	MGP_SPRETEiJ_G0033061	-	98	83.659	Mus_spretus
ENSCPBG00000026880	PRDM10	99	82.819	ENSMPUG00000008711	PRDM10	99	82.986	Mustela_putorius_furo
ENSCPBG00000026880	PRDM10	99	81.697	ENSMLUG00000013051	PRDM10	100	82.280	Myotis_lucifugus
ENSCPBG00000026880	PRDM10	99	81.803	ENSNGAG00000000580	Prdm10	99	85.084	Nannospalax_galili
ENSCPBG00000026880	PRDM10	99	82.724	ENSNLEG00000007488	PRDM10	100	83.167	Nomascus_leucogenys
ENSCPBG00000026880	PRDM10	99	78.805	ENSODEG00000005309	PRDM10	99	83.829	Octodon_degus
ENSCPBG00000026880	PRDM10	99	80.314	ENSOANG00000000577	-	100	79.074	Ornithorhynchus_anatinus
ENSCPBG00000026880	PRDM10	99	82.053	ENSOCUG00000003736	PRDM10	100	82.053	Oryctolagus_cuniculus
ENSCPBG00000026880	PRDM10	99	81.728	ENSOGAG00000010723	PRDM10	100	81.728	Otolemur_garnettii
ENSCPBG00000026880	PRDM10	99	81.902	ENSOARG00000014507	PRDM10	100	82.068	Ovis_aries
ENSCPBG00000026880	PRDM10	99	82.436	ENSPPAG00000042881	PRDM10	100	82.519	Pan_paniscus
ENSCPBG00000026880	PRDM10	99	82.627	ENSPPRG00000007002	PRDM10	100	82.793	Panthera_pardus
ENSCPBG00000026880	PRDM10	99	82.627	ENSPTIG00000013331	PRDM10	100	82.793	Panthera_tigris_altaica
ENSCPBG00000026880	PRDM10	99	82.519	ENSPTRG00000004477	PRDM10	100	82.876	Pan_troglodytes
ENSCPBG00000026880	PRDM10	99	82.724	ENSPANG00000017470	PRDM10	100	83.223	Papio_anubis
ENSCPBG00000026880	PRDM10	99	79.279	ENSPEMG00000014985	Prdm10	99	84.378	Peromyscus_maniculatus_bairdii
ENSCPBG00000026880	PRDM10	99	82.529	ENSPPYG00000004061	PRDM10	100	82.945	Pongo_abelii
ENSCPBG00000026880	PRDM10	90	82.316	ENSPCAG00000014514	PRDM10	92	82.737	Procavia_capensis
ENSCPBG00000026880	PRDM10	98	72.077	ENSPCOG00000023406	PRDM10	100	69.760	Propithecus_coquereli
ENSCPBG00000026880	PRDM10	99	82.544	ENSPVAG00000012764	PRDM10	100	82.793	Pteropus_vampyrus
ENSCPBG00000026880	PRDM10	99	81.417	ENSRNOG00000007853	Prdm10	100	81.417	Rattus_norvegicus
ENSCPBG00000026880	PRDM10	99	82.338	ENSRBIG00000030924	PRDM10	100	82.421	Rhinopithecus_bieti
ENSCPBG00000026880	PRDM10	99	82.338	ENSRROG00000034334	PRDM10	100	82.421	Rhinopithecus_roxellana
ENSCPBG00000026880	PRDM10	99	82.172	ENSSBOG00000008773	PRDM10	100	82.529	Saimiri_boliviensis_boliviensis
ENSCPBG00000026880	PRDM10	99	85.988	ENSSHAG00000004503	PRDM10	99	85.488	Sarcophilus_harrisii
ENSCPBG00000026880	PRDM10	64	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCPBG00000026880	PRDM10	97	89.597	ENSSPUG00000001178	PRDM10	98	94.096	Sphenodon_punctatus
ENSCPBG00000026880	PRDM10	99	81.712	ENSSSCG00000015243	PRDM10	99	84.008	Sus_scrofa
ENSCPBG00000026880	PRDM10	99	90.117	ENSTGUG00000000530	PRDM10	100	89.447	Taeniopygia_guttata
ENSCPBG00000026880	PRDM10	93	83.379	ENSTBEG00000007221	PRDM10	94	77.033	Tupaia_belangeri
ENSCPBG00000026880	PRDM10	99	81.083	ENSTTRG00000009189	PRDM10	100	80.516	Tursiops_truncatus
ENSCPBG00000026880	PRDM10	90	82.188	ENSUAMG00000018832	PRDM10	94	88.365	Ursus_americanus
ENSCPBG00000026880	PRDM10	99	81.962	ENSUMAG00000003167	PRDM10	99	86.347	Ursus_maritimus
ENSCPBG00000026880	PRDM10	99	81.985	ENSVVUG00000019878	PRDM10	100	82.235	Vulpes_vulpes
ENSCPBG00000026880	PRDM10	99	73.975	ENSXETG00000032173	PRDM10	100	73.913	Xenopus_tropicalis