EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026959 (Gene tree)
Gene ID: 101932747
Gene Symbol: KATNB1
Alias: -
Full Name: katanin regulatory subunit B1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 27849 bases
Position: chrKK083132.1:850377-878225
Accession: 6217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039121	eIF2A	PF08662.11	8.4e-07	1	1
ENSCPBP00000039123	eIF2A	PF08662.11	9.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045852	KATNB1-202	2087	-	ENSCPBP00000039123	607 (aa)	-	-
ENSCPBT00000045850	KATNB1-201	2237	-	ENSCPBP00000039121	657 (aa)	XP_008172766	UPI00046C268C

Gene Model

Click here to download ENSCPBG00000026959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026959	KATNB1	50	33.486	ENSCPBG00000000137	POC1B	68	32.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026959	KATNB1	67	40.268	FBgn0040207	kat80	52	40.860	Drosophila_melanogaster
ENSCPBG00000026959	KATNB1	100	86.626	ENSFALG00000006902	KATNB1	100	86.626	Ficedula_albicollis
ENSCPBG00000026959	KATNB1	100	86.161	ENSGALG00000034373	KATNB1	100	86.161	Gallus_gallus
ENSCPBG00000026959	KATNB1	100	99.239	ENSGAGG00000020527	KATNB1	100	99.239	Gopherus_agassizii
ENSCPBG00000026959	KATNB1	100	92.085	ENSPSIG00000014651	KATNB1	100	92.085	Pelodiscus_sinensis
ENSCPBG00000026959	KATNB1	100	89.193	ENSSPUG00000007498	KATNB1	100	89.193	Sphenodon_punctatus
ENSCPBG00000026959	KATNB1	100	85.564	ENSTGUG00000004876	KATNB1	100	85.714	Taeniopygia_guttata