EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000026969 (Gene tree)
Gene ID: 101938790
Gene Symbol: KARS
Alias: DFNB89|KARS1|KARS2
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 23529 bases
Position: chrKK088225.1:153652-177180
Accession: 6215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039142	tRNA_anti-codon	PF01336.25	6.8e-14	1	1
ENSCPBP00000039140	tRNA_anti-codon	PF01336.25	7.4e-14	1	1
ENSCPBP00000039142	tRNA-synt_2	PF00152.20	2.1e-78	1	1
ENSCPBP00000039140	tRNA-synt_2	PF00152.20	2.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000045874	KARS-201	2350	XM_005310200	ENSCPBP00000039140	610 (aa)	XP_005310257	UPI000388A612
ENSCPBT00000045876	KARS-202	2191	XM_005310201	ENSCPBP00000039142	592 (aa)	XP_005310258	UPI000388F7CC

Gene Model

Click here to download ENSCPBG00000026969's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000026969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000026969	KARS	89	71.947	ENSCPBG00000002553	-	95	71.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000026969	KARS	99	83.953	ENSG00000065427	KARS	100	92.157	Homo_sapiens
ENSCPBG00000026969	KARS	98	80.446	ENSAPOG00000010997	kars	99	80.446	Acanthochromis_polyacanthus
ENSCPBG00000026969	KARS	100	80.515	ENSAMEG00000005347	KARS	99	80.676	Ailuropoda_melanoleuca
ENSCPBG00000026969	KARS	97	75.862	ENSACIG00000000304	kars	98	77.178	Amphilophus_citrinellus
ENSCPBG00000026969	KARS	96	81.754	ENSAOCG00000012971	kars	97	81.395	Amphiprion_ocellaris
ENSCPBG00000026969	KARS	98	80.789	ENSAPEG00000011144	kars	99	80.789	Amphiprion_percula
ENSCPBG00000026969	KARS	98	79.074	ENSATEG00000004954	kars	99	79.074	Anabas_testudineus
ENSCPBG00000026969	KARS	94	85.740	ENSAPLG00000012705	KARS	97	88.224	Anas_platyrhynchos
ENSCPBG00000026969	KARS	98	83.938	ENSACAG00000007577	KARS	98	79.904	Anolis_carolinensis
ENSCPBG00000026969	KARS	97	70.345	ENSANAG00000031739	-	96	70.486	Aotus_nancymaae
ENSCPBG00000026969	KARS	100	83.697	ENSANAG00000030403	-	97	84.828	Aotus_nancymaae
ENSCPBG00000026969	KARS	97	81.501	ENSACLG00000001613	kars	96	81.850	Astatotilapia_calliptera
ENSCPBG00000026969	KARS	98	80.617	ENSAMXG00000030719	kars	99	80.862	Astyanax_mexicanus
ENSCPBG00000026969	KARS	100	83.920	ENSBTAG00000015677	KARS	75	85.223	Bos_taurus
ENSCPBG00000026969	KARS	95	60.213	WBGene00002238	kars-1	98	63.492	Caenorhabditis_elegans
ENSCPBG00000026969	KARS	100	84.202	ENSCJAG00000014213	KARS	97	85.814	Callithrix_jacchus
ENSCPBG00000026969	KARS	100	81.470	ENSCAFG00000020069	KARS	100	81.629	Canis_familiaris
ENSCPBG00000026969	KARS	100	83.500	ENSCAFG00020001721	KARS	98	84.524	Canis_lupus_dingo
ENSCPBG00000026969	KARS	96	84.119	ENSCHIG00000016073	-	95	84.119	Capra_hircus
ENSCPBG00000026969	KARS	100	84.087	ENSCHIG00000014108	-	98	85.395	Capra_hircus
ENSCPBG00000026969	KARS	97	85.417	ENSTSYG00000001643	KARS	99	84.922	Carlito_syrichta
ENSCPBG00000026969	KARS	100	76.575	ENSCAPG00000016234	KARS	96	79.685	Cavia_aperea
ENSCPBG00000026969	KARS	99	84.576	ENSCPOG00000012036	KARS	98	85.542	Cavia_porcellus
ENSCPBG00000026969	KARS	91	70.130	ENSCCAG00000030337	-	98	70.315	Cebus_capucinus
ENSCPBG00000026969	KARS	100	84.202	ENSCCAG00000034307	-	97	85.517	Cebus_capucinus
ENSCPBG00000026969	KARS	99	82.770	ENSCATG00000038129	KARS	97	84.000	Cercocebus_atys
ENSCPBG00000026969	KARS	99	83.980	ENSCLAG00000007905	KARS	97	85.172	Chinchilla_lanigera
ENSCPBG00000026969	KARS	100	80.676	ENSCSAG00000003664	KARS	99	80.676	Chlorocebus_sabaeus
ENSCPBG00000026969	KARS	78	87.905	ENSCHOG00000013447	KARS	74	87.905	Choloepus_hoffmanni
ENSCPBG00000026969	KARS	96	68.881	ENSCING00000009513	-	99	69.056	Ciona_intestinalis
ENSCPBG00000026969	KARS	95	70.357	ENSCSAVG00000007684	-	100	67.539	Ciona_savignyi
ENSCPBG00000026969	KARS	54	70.846	ENSCSAVG00000001136	-	100	72.797	Ciona_savignyi
ENSCPBG00000026969	KARS	100	78.824	ENSCANG00000032813	KARS	97	80.000	Colobus_angolensis_palliatus
ENSCPBG00000026969	KARS	98	84.364	ENSCGRG00001004055	KARS	98	84.220	Cricetulus_griseus_chok1gshd
ENSCPBG00000026969	KARS	98	84.364	ENSCGRG00000014242	KARS	98	84.220	Cricetulus_griseus_crigri
ENSCPBG00000026969	KARS	94	83.005	ENSCSEG00000008324	kars	96	83.005	Cynoglossus_semilaevis
ENSCPBG00000026969	KARS	97	80.594	ENSCVAG00000019686	kars	99	80.594	Cyprinodon_variegatus
ENSCPBG00000026969	KARS	97	82.548	ENSDARG00000103799	kars	99	84.778	Danio_rerio
ENSCPBG00000026969	KARS	98	84.103	ENSDNOG00000002241	KARS	99	81.481	Dasypus_novemcinctus
ENSCPBG00000026969	KARS	98	85.223	ENSDORG00000004780	-	98	85.223	Dipodomys_ordii
ENSCPBG00000026969	KARS	93	66.306	ENSDORG00000024214	-	95	66.486	Dipodomys_ordii
ENSCPBG00000026969	KARS	97	69.444	FBgn0027084	LysRS	99	69.483	Drosophila_melanogaster
ENSCPBG00000026969	KARS	100	80.671	ENSETEG00000008353	KARS	100	80.671	Echinops_telfairi
ENSCPBG00000026969	KARS	99	72.034	ENSEBUG00000001284	-	98	73.217	Eptatretus_burgeri
ENSCPBG00000026969	KARS	99	84.772	ENSEASG00005013497	KARS	97	85.690	Equus_asinus_asinus
ENSCPBG00000026969	KARS	99	84.772	ENSECAG00000013424	KARS	97	85.690	Equus_caballus
ENSCPBG00000026969	KARS	98	76.112	ENSEEUG00000007042	KARS	99	74.839	Erinaceus_europaeus
ENSCPBG00000026969	KARS	96	73.509	ENSELUG00000014575	kars	97	73.509	Esox_lucius
ENSCPBG00000026969	KARS	98	85.223	ENSFCAG00000008573	KARS	97	85.000	Felis_catus
ENSCPBG00000026969	KARS	99	85.497	ENSFALG00000002543	KARS	98	85.959	Ficedula_albicollis
ENSCPBG00000026969	KARS	100	83.361	ENSFDAG00000007155	KARS	98	84.708	Fukomys_damarensis
ENSCPBG00000026969	KARS	98	78.902	ENSFHEG00000006172	kars	99	78.902	Fundulus_heteroclitus
ENSCPBG00000026969	KARS	96	78.223	ENSGMOG00000002633	kars	97	75.788	Gadus_morhua
ENSCPBG00000026969	KARS	99	86.757	ENSGALG00000000907	KARS	99	88.070	Gallus_gallus
ENSCPBG00000026969	KARS	97	80.035	ENSGAFG00000017252	kars	99	80.382	Gambusia_affinis
ENSCPBG00000026969	KARS	97	80.035	ENSGACG00000015749	kars	96	80.035	Gasterosteus_aculeatus
ENSCPBG00000026969	KARS	89	72.137	ENSGAGG00000011960	-	96	73.281	Gopherus_agassizii
ENSCPBG00000026969	KARS	100	97.705	ENSGAGG00000023836	KARS	100	97.705	Gopherus_agassizii
ENSCPBG00000026969	KARS	99	83.953	ENSGGOG00000005515	KARS	97	85.172	Gorilla_gorilla
ENSCPBG00000026969	KARS	97	81.501	ENSHBUG00000013619	kars	96	81.850	Haplochromis_burtoni
ENSCPBG00000026969	KARS	100	73.445	ENSHGLG00000015235	-	98	74.399	Heterocephalus_glaber_female
ENSCPBG00000026969	KARS	100	83.529	ENSHGLG00000011898	KARS	99	84.991	Heterocephalus_glaber_female
ENSCPBG00000026969	KARS	99	68.174	ENSHGLG00000001298	-	98	68.878	Heterocephalus_glaber_female
ENSCPBG00000026969	KARS	99	68.007	ENSHGLG00100006466	-	98	68.707	Heterocephalus_glaber_male
ENSCPBG00000026969	KARS	100	73.277	ENSHGLG00100012523	-	98	74.227	Heterocephalus_glaber_male
ENSCPBG00000026969	KARS	100	83.529	ENSHGLG00100012264	KARS	98	84.708	Heterocephalus_glaber_male
ENSCPBG00000026969	KARS	98	80.274	ENSHCOG00000002900	kars	96	80.274	Hippocampus_comes
ENSCPBG00000026969	KARS	98	79.381	ENSIPUG00000009862	kars	99	79.381	Ictalurus_punctatus
ENSCPBG00000026969	KARS	100	84.202	ENSSTOG00000004205	KARS	98	85.567	Ictidomys_tridecemlineatus
ENSCPBG00000026969	KARS	98	84.536	ENSJJAG00000020406	Kars	98	84.880	Jaculus_jaculus
ENSCPBG00000026969	KARS	97	80.769	ENSKMAG00000006434	kars	98	80.769	Kryptolebias_marmoratus
ENSCPBG00000026969	KARS	98	79.588	ENSLBEG00000026537	kars	96	79.588	Labrus_bergylta
ENSCPBG00000026969	KARS	97	83.421	ENSLACG00000006667	KARS	100	80.000	Latimeria_chalumnae
ENSCPBG00000026969	KARS	85	75.494	ENSLACG00000016399	-	99	75.494	Latimeria_chalumnae
ENSCPBG00000026969	KARS	89	71.103	ENSLOCG00000013608	-	95	71.103	Lepisosteus_oculatus
ENSCPBG00000026969	KARS	98	81.034	ENSLOCG00000004002	kars	99	81.034	Lepisosteus_oculatus
ENSCPBG00000026969	KARS	98	83.106	ENSLAFG00000015340	KARS	100	80.225	Loxodonta_africana
ENSCPBG00000026969	KARS	99	82.939	ENSMFAG00000040024	KARS	97	83.966	Macaca_fascicularis
ENSCPBG00000026969	KARS	99	82.939	ENSMNEG00000042879	-	97	83.966	Macaca_nemestrina
ENSCPBG00000026969	KARS	86	82.101	ENSMNEG00000035832	-	96	83.267	Macaca_nemestrina
ENSCPBG00000026969	KARS	99	82.770	ENSMLEG00000034947	KARS	97	83.793	Mandrillus_leucophaeus
ENSCPBG00000026969	KARS	96	80.911	ENSMAMG00000021559	kars	99	77.325	Mastacembelus_armatus
ENSCPBG00000026969	KARS	97	81.501	ENSMZEG00005014382	kars	96	81.850	Maylandia_zebra
ENSCPBG00000026969	KARS	95	86.631	ENSMGAG00000009000	KARS	98	87.342	Meleagris_gallopavo
ENSCPBG00000026969	KARS	100	84.175	ENSMICG00000011997	KARS	98	84.906	Microcebus_murinus
ENSCPBG00000026969	KARS	98	82.069	ENSMOCG00000019029	-	98	82.069	Microtus_ochrogaster
ENSCPBG00000026969	KARS	98	85.000	ENSMOCG00000011829	Kars	98	85.000	Microtus_ochrogaster
ENSCPBG00000026969	KARS	96	81.371	ENSMMOG00000016934	kars	100	81.371	Mola_mola
ENSCPBG00000026969	KARS	96	83.656	ENSMODG00000002215	-	99	83.831	Monodelphis_domestica
ENSCPBG00000026969	KARS	99	75.693	ENSMODG00000002238	-	98	75.693	Monodelphis_domestica
ENSCPBG00000026969	KARS	98	80.103	ENSMALG00000020858	kars	99	80.345	Monopterus_albus
ENSCPBG00000026969	KARS	84	84.097	MGP_CAROLIEiJ_G0031588	Kars	99	84.097	Mus_caroli
ENSCPBG00000026969	KARS	97	84.974	ENSMUSG00000031948	Kars	97	84.974	Mus_musculus
ENSCPBG00000026969	KARS	97	84.111	MGP_PahariEiJ_G0023186	Kars	97	84.111	Mus_pahari
ENSCPBG00000026969	KARS	97	84.801	MGP_SPRETEiJ_G0032706	Kars	97	84.801	Mus_spretus
ENSCPBG00000026969	KARS	100	81.481	ENSMPUG00000009871	KARS	99	81.643	Mustela_putorius_furo
ENSCPBG00000026969	KARS	99	83.784	ENSMLUG00000015119	-	98	84.418	Myotis_lucifugus
ENSCPBG00000026969	KARS	80	55.556	ENSMLUG00000026871	-	93	55.556	Myotis_lucifugus
ENSCPBG00000026969	KARS	98	84.682	ENSNGAG00000018820	-	98	84.682	Nannospalax_galili
ENSCPBG00000026969	KARS	93	84.448	ENSNGAG00000022944	-	95	84.448	Nannospalax_galili
ENSCPBG00000026969	KARS	97	80.977	ENSNBRG00000011098	kars	96	81.326	Neolamprologus_brichardi
ENSCPBG00000026969	KARS	99	83.615	ENSNLEG00000013072	KARS	99	83.592	Nomascus_leucogenys
ENSCPBG00000026969	KARS	99	76.105	ENSMEUG00000008684	KARS	99	76.105	Notamacropus_eugenii
ENSCPBG00000026969	KARS	97	83.993	ENSOPRG00000012544	KARS	99	81.579	Ochotona_princeps
ENSCPBG00000026969	KARS	96	61.082	ENSODEG00000009464	-	99	61.082	Octodon_degus
ENSCPBG00000026969	KARS	100	84.034	ENSODEG00000013099	-	99	85.490	Octodon_degus
ENSCPBG00000026969	KARS	97	81.501	ENSONIG00000005937	kars	98	81.850	Oreochromis_niloticus
ENSCPBG00000026969	KARS	98	84.247	ENSOANG00000008179	KARS	97	85.366	Ornithorhynchus_anatinus
ENSCPBG00000026969	KARS	99	76.975	ENSOCUG00000015553	KARS	97	78.201	Oryctolagus_cuniculus
ENSCPBG00000026969	KARS	98	80.690	ENSORLG00000007627	kars	97	79.293	Oryzias_latipes
ENSCPBG00000026969	KARS	98	80.690	ENSORLG00020010056	kars	97	79.293	Oryzias_latipes_hni
ENSCPBG00000026969	KARS	98	80.345	ENSORLG00015008179	kars	97	78.956	Oryzias_latipes_hsok
ENSCPBG00000026969	KARS	98	80.069	ENSOMEG00000001710	kars	98	81.643	Oryzias_melastigma
ENSCPBG00000026969	KARS	100	75.845	ENSOGAG00000005903	KARS	99	75.845	Otolemur_garnettii
ENSCPBG00000026969	KARS	92	84.364	ENSOARG00000006928	KARS	94	85.794	Ovis_aries
ENSCPBG00000026969	KARS	99	83.615	ENSPPAG00000036192	KARS	97	84.828	Pan_paniscus
ENSCPBG00000026969	KARS	97	85.147	ENSPPRG00000003027	KARS	97	84.828	Panthera_pardus
ENSCPBG00000026969	KARS	97	85.320	ENSPTIG00000008011	KARS	97	85.000	Panthera_tigris_altaica
ENSCPBG00000026969	KARS	99	83.784	ENSPTRG00000008364	KARS	97	85.000	Pan_troglodytes
ENSCPBG00000026969	KARS	99	82.939	ENSPANG00000024106	KARS	99	80.837	Papio_anubis
ENSCPBG00000026969	KARS	98	80.993	ENSPKIG00000009896	kars	99	80.993	Paramormyrops_kingsleyae
ENSCPBG00000026969	KARS	95	93.761	ENSPSIG00000009294	KARS	96	94.604	Pelodiscus_sinensis
ENSCPBG00000026969	KARS	88	75.048	ENSPSIG00000003041	-	96	75.048	Pelodiscus_sinensis
ENSCPBG00000026969	KARS	89	85.199	ENSPMGG00000006117	kars	100	81.818	Periophthalmus_magnuspinnatus
ENSCPBG00000026969	KARS	98	84.364	ENSPEMG00000012277	Kars	98	84.364	Peromyscus_maniculatus_bairdii
ENSCPBG00000026969	KARS	96	75.175	ENSPMAG00000008360	-	99	71.429	Petromyzon_marinus
ENSCPBG00000026969	KARS	99	83.926	ENSPCIG00000010761	-	97	85.243	Phascolarctos_cinereus
ENSCPBG00000026969	KARS	100	77.221	ENSPCIG00000025469	-	99	77.221	Phascolarctos_cinereus
ENSCPBG00000026969	KARS	96	80.351	ENSPFOG00000013253	kars	98	77.612	Poecilia_formosa
ENSCPBG00000026969	KARS	97	80.208	ENSPLAG00000004189	kars	99	80.208	Poecilia_latipinna
ENSCPBG00000026969	KARS	97	80.382	ENSPMEG00000015698	kars	99	80.382	Poecilia_mexicana
ENSCPBG00000026969	KARS	97	80.420	ENSPREG00000023179	kars	98	80.769	Poecilia_reticulata
ENSCPBG00000026969	KARS	100	81.320	ENSPPYG00000007567	KARS	99	81.481	Pongo_abelii
ENSCPBG00000026969	KARS	88	78.998	ENSPCAG00000010790	KARS	99	78.998	Procavia_capensis
ENSCPBG00000026969	KARS	100	76.431	ENSPCOG00000003166	KARS	99	74.839	Propithecus_coquereli
ENSCPBG00000026969	KARS	97	84.682	ENSPVAG00000006746	KARS	99	81.090	Pteropus_vampyrus
ENSCPBG00000026969	KARS	97	81.501	ENSPNYG00000013095	kars	96	81.850	Pundamilia_nyererei
ENSCPBG00000026969	KARS	98	80.789	ENSPNAG00000013828	kars	98	81.675	Pygocentrus_nattereri
ENSCPBG00000026969	KARS	98	83.048	ENSRNOG00000019456	Kars	99	81.129	Rattus_norvegicus
ENSCPBG00000026969	KARS	99	82.770	ENSRBIG00000030118	KARS	97	83.826	Rhinopithecus_bieti
ENSCPBG00000026969	KARS	97	83.826	ENSRROG00000041418	KARS	97	83.826	Rhinopithecus_roxellana
ENSCPBG00000026969	KARS	79	33.667	YNL073W	-	86	33.667	Saccharomyces_cerevisiae
ENSCPBG00000026969	KARS	98	56.973	YDR037W	KRS1	95	57.895	Saccharomyces_cerevisiae
ENSCPBG00000026969	KARS	100	83.697	ENSSBOG00000019255	KARS	99	85.289	Saimiri_boliviensis_boliviensis
ENSCPBG00000026969	KARS	96	78.223	ENSSHAG00000001359	-	99	78.397	Sarcophilus_harrisii
ENSCPBG00000026969	KARS	93	71.920	ENSSHAG00000009005	-	99	71.920	Sarcophilus_harrisii
ENSCPBG00000026969	KARS	100	66.129	ENSSHAG00000002050	-	99	66.129	Sarcophilus_harrisii
ENSCPBG00000026969	KARS	95	80.952	ENSSFOG00015014837	kars	100	80.952	Scleropages_formosus
ENSCPBG00000026969	KARS	97	81.850	ENSSMAG00000021441	kars	98	81.850	Scophthalmus_maximus
ENSCPBG00000026969	KARS	97	81.850	ENSSDUG00000001202	kars	98	81.850	Seriola_dumerili
ENSCPBG00000026969	KARS	96	81.579	ENSSLDG00000021220	kars	98	81.754	Seriola_lalandi_dorsalis
ENSCPBG00000026969	KARS	76	86.186	ENSSARG00000011493	KARS	78	86.486	Sorex_araneus
ENSCPBG00000026969	KARS	62	67.209	ENSSPUG00000000449	-	86	67.209	Sphenodon_punctatus
ENSCPBG00000026969	KARS	97	87.329	ENSSPUG00000004974	KARS	98	86.927	Sphenodon_punctatus
ENSCPBG00000026969	KARS	96	80.668	ENSSPAG00000020365	kars	97	80.668	Stegastes_partitus
ENSCPBG00000026969	KARS	99	84.095	ENSSSCG00000002704	KARS	97	85.320	Sus_scrofa
ENSCPBG00000026969	KARS	95	87.166	ENSTGUG00000008400	KARS	99	87.166	Taeniopygia_guttata
ENSCPBG00000026969	KARS	96	79.510	ENSTRUG00000017551	kars	93	79.510	Takifugu_rubripes
ENSCPBG00000026969	KARS	97	79.232	ENSTNIG00000009351	kars	97	79.649	Tetraodon_nigroviridis
ENSCPBG00000026969	KARS	96	66.084	ENSTBEG00000004610	KARS	99	66.084	Tupaia_belangeri
ENSCPBG00000026969	KARS	98	83.192	ENSTTRG00000001221	KARS	100	80.960	Tursiops_truncatus
ENSCPBG00000026969	KARS	99	82.660	ENSUAMG00000017557	KARS	97	83.793	Ursus_americanus
ENSCPBG00000026969	KARS	100	80.515	ENSUMAG00000014559	KARS	99	80.676	Ursus_maritimus
ENSCPBG00000026969	KARS	98	82.534	ENSVPAG00000003716	KARS	99	80.323	Vicugna_pacos
ENSCPBG00000026969	KARS	100	83.167	ENSVVUG00000024338	KARS	100	84.386	Vulpes_vulpes
ENSCPBG00000026969	KARS	100	78.246	ENSXETG00000003569	kars	99	79.010	Xenopus_tropicalis
ENSCPBG00000026969	KARS	95	80.000	ENSXCOG00000011313	kars	100	80.354	Xiphophorus_couchianus
ENSCPBG00000026969	KARS	97	79.861	ENSXMAG00000003191	kars	99	80.208	Xiphophorus_maculatus