EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027061 (Gene tree)
Gene ID: 101933569
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 8302 bases
Position: chrKK083133.1:1198473-1206774
Accession: 17896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039284	Prp19	PF08606.11	7.3e-33	1	1
ENSCPBP00000039287	Prp19	PF08606.11	7.6e-33	1	1
ENSCPBP00000039282	Prp19	PF08606.11	7.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046041	PRPF19-201	2512	-	ENSCPBP00000039282	517 (aa)	-	-
ENSCPBT00000046043	PRPF19-202	2127	-	ENSCPBP00000039284	490 (aa)	-	-
ENSCPBT00000046046	PRPF19-203	1917	XM_005309634	ENSCPBP00000039287	504 (aa)	XP_005309691	UPI000388D812

Gene Model

Click here to download ENSCPBG00000027061's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG
cpic04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027061	PRPF19	56	30.290	ENSCPBG00000000137	POC1B	60	30.290
ENSCPBG00000027061	PRPF19	51	37.624	ENSCPBG00000000253	TBL3	66	37.624
ENSCPBG00000027061	PRPF19	54	30.270	ENSCPBG00000016728	POC1A	96	30.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027061	PRPF19	100	97.619	ENSG00000110107	PRPF19	100	97.619	Homo_sapiens
ENSCPBG00000027061	PRPF19	100	85.347	ENSAPOG00000017823	prpf19	100	86.425	Acanthochromis_polyacanthus
ENSCPBG00000027061	PRPF19	100	97.586	ENSAMEG00000007375	PRPF19	99	97.586	Ailuropoda_melanoleuca
ENSCPBG00000027061	PRPF19	99	84.095	ENSACIG00000015876	prpf19	99	85.227	Amphilophus_citrinellus
ENSCPBG00000027061	PRPF19	100	85.149	ENSAOCG00000020444	prpf19	100	86.199	Amphiprion_ocellaris
ENSCPBG00000027061	PRPF19	100	85.149	ENSAPEG00000016076	prpf19	100	86.199	Amphiprion_percula
ENSCPBG00000027061	PRPF19	100	85.347	ENSATEG00000008840	prpf19	100	86.199	Anabas_testudineus
ENSCPBG00000027061	PRPF19	100	97.421	ENSACAG00000017797	PRPF19	100	97.458	Anolis_carolinensis
ENSCPBG00000027061	PRPF19	100	97.619	ENSANAG00000021762	PRPF19	100	97.619	Aotus_nancymaae
ENSCPBG00000027061	PRPF19	100	84.356	ENSACLG00000009416	prpf19	100	85.520	Astatotilapia_calliptera
ENSCPBG00000027061	PRPF19	100	84.752	ENSAMXG00000011547	prpf19	100	85.520	Astyanax_mexicanus
ENSCPBG00000027061	PRPF19	100	97.817	ENSBTAG00000014366	PRPF19	100	97.817	Bos_taurus
ENSCPBG00000027061	PRPF19	100	51.186	WBGene00020423	prp-19	100	51.186	Caenorhabditis_elegans
ENSCPBG00000027061	PRPF19	100	97.421	ENSCJAG00000016509	PRPF19	100	97.421	Callithrix_jacchus
ENSCPBG00000027061	PRPF19	100	97.619	ENSCAFG00000016438	PRPF19	98	97.619	Canis_familiaris
ENSCPBG00000027061	PRPF19	100	97.619	ENSCAFG00020012565	PRPF19	100	97.619	Canis_lupus_dingo
ENSCPBG00000027061	PRPF19	100	97.817	ENSCHIG00000018281	PRPF19	100	97.817	Capra_hircus
ENSCPBG00000027061	PRPF19	99	97.390	ENSTSYG00000006860	PRPF19	99	97.390	Carlito_syrichta
ENSCPBG00000027061	PRPF19	99	96.994	ENSCAPG00000016225	PRPF19	100	97.002	Cavia_aperea
ENSCPBG00000027061	PRPF19	100	97.421	ENSCPOG00000020688	PRPF19	100	97.458	Cavia_porcellus
ENSCPBG00000027061	PRPF19	100	97.421	ENSCCAG00000025839	PRPF19	100	97.421	Cebus_capucinus
ENSCPBG00000027061	PRPF19	100	97.619	ENSCATG00000041921	PRPF19	100	97.619	Cercocebus_atys
ENSCPBG00000027061	PRPF19	99	97.384	ENSCLAG00000003338	PRPF19	100	97.419	Chinchilla_lanigera
ENSCPBG00000027061	PRPF19	100	97.619	ENSCSAG00000006254	PRPF19	100	97.619	Chlorocebus_sabaeus
ENSCPBG00000027061	PRPF19	63	85.209	ENSCHOG00000005840	PRPF19	100	85.209	Choloepus_hoffmanni
ENSCPBG00000027061	PRPF19	89	67.661	ENSCING00000016625	-	99	68.046	Ciona_intestinalis
ENSCPBG00000027061	PRPF19	100	68.254	ENSCSAVG00000002027	-	99	68.254	Ciona_savignyi
ENSCPBG00000027061	PRPF19	99	100.000	ENSCANG00000027155	PRPF19	99	96.667	Colobus_angolensis_palliatus
ENSCPBG00000027061	PRPF19	100	97.421	ENSCGRG00001002699	Prpf19	100	97.421	Cricetulus_griseus_chok1gshd
ENSCPBG00000027061	PRPF19	100	96.429	ENSCGRG00000008964	Prpf19	100	96.429	Cricetulus_griseus_crigri
ENSCPBG00000027061	PRPF19	100	84.356	ENSCSEG00000010411	prpf19	100	85.294	Cynoglossus_semilaevis
ENSCPBG00000027061	PRPF19	100	84.554	ENSCVAG00000012011	prpf19	100	85.520	Cyprinodon_variegatus
ENSCPBG00000027061	PRPF19	100	84.356	ENSDARG00000015239	prpf19	100	84.842	Danio_rerio
ENSCPBG00000027061	PRPF19	100	97.421	ENSDNOG00000005797	PRPF19	100	97.421	Dasypus_novemcinctus
ENSCPBG00000027061	PRPF19	100	97.421	ENSDORG00000006906	Prpf19	100	97.421	Dipodomys_ordii
ENSCPBG00000027061	PRPF19	100	65.294	FBgn0261119	Prp19	99	66.216	Drosophila_melanogaster
ENSCPBG00000027061	PRPF19	100	85.317	ENSETEG00000012295	PRPF19	100	85.317	Echinops_telfairi
ENSCPBG00000027061	PRPF19	83	76.190	ENSEBUG00000013075	prpf19	100	77.871	Eptatretus_burgeri
ENSCPBG00000027061	PRPF19	100	97.059	ENSEASG00005008056	PRPF19	98	97.059	Equus_asinus_asinus
ENSCPBG00000027061	PRPF19	100	97.619	ENSECAG00000007322	PRPF19	100	97.619	Equus_caballus
ENSCPBG00000027061	PRPF19	100	77.976	ENSELUG00000004578	prpf19	100	84.915	Esox_lucius
ENSCPBG00000027061	PRPF19	100	83.564	ENSELUG00000020276	-	100	83.937	Esox_lucius
ENSCPBG00000027061	PRPF19	100	97.619	ENSFCAG00000013668	PRPF19	100	97.619	Felis_catus
ENSCPBG00000027061	PRPF19	100	97.421	ENSFALG00000012084	PRPF19	100	97.421	Ficedula_albicollis
ENSCPBG00000027061	PRPF19	84	96.919	ENSFDAG00000009420	PRPF19	96	96.923	Fukomys_damarensis
ENSCPBG00000027061	PRPF19	100	84.554	ENSFHEG00000022135	prpf19	100	85.747	Fundulus_heteroclitus
ENSCPBG00000027061	PRPF19	100	85.347	ENSGMOG00000014756	prpf19	100	86.652	Gadus_morhua
ENSCPBG00000027061	PRPF19	100	97.619	ENSGALG00000036530	PRPF19	100	97.619	Gallus_gallus
ENSCPBG00000027061	PRPF19	100	83.960	ENSGAFG00000008931	prpf19	100	85.294	Gambusia_affinis
ENSCPBG00000027061	PRPF19	100	84.356	ENSGACG00000017976	prpf19	100	85.747	Gasterosteus_aculeatus
ENSCPBG00000027061	PRPF19	100	99.802	ENSGAGG00000013328	PRPF19	100	99.802	Gopherus_agassizii
ENSCPBG00000027061	PRPF19	100	97.619	ENSGGOG00000008648	PRPF19	100	97.619	Gorilla_gorilla
ENSCPBG00000027061	PRPF19	100	84.356	ENSHBUG00000008394	prpf19	100	85.520	Haplochromis_burtoni
ENSCPBG00000027061	PRPF19	100	97.421	ENSHGLG00000003934	PRPF19	100	97.458	Heterocephalus_glaber_female
ENSCPBG00000027061	PRPF19	99	78.846	ENSHGLG00100010649	PRPF19	100	78.873	Heterocephalus_glaber_male
ENSCPBG00000027061	PRPF19	100	82.970	ENSHCOG00000016720	prpf19	100	84.163	Hippocampus_comes
ENSCPBG00000027061	PRPF19	100	84.752	ENSIPUG00000013084	prpf19	100	85.294	Ictalurus_punctatus
ENSCPBG00000027061	PRPF19	100	97.024	ENSSTOG00000001598	PRPF19	100	97.024	Ictidomys_tridecemlineatus
ENSCPBG00000027061	PRPF19	100	97.421	ENSJJAG00000020609	Prpf19	100	97.421	Jaculus_jaculus
ENSCPBG00000027061	PRPF19	100	84.950	ENSKMAG00000010257	prpf19	100	86.199	Kryptolebias_marmoratus
ENSCPBG00000027061	PRPF19	100	84.554	ENSLBEG00000027436	prpf19	100	85.747	Labrus_bergylta
ENSCPBG00000027061	PRPF19	100	89.286	ENSLACG00000003434	PRPF19	100	89.619	Latimeria_chalumnae
ENSCPBG00000027061	PRPF19	91	73.348	ENSLOCG00000008123	prpf19	100	73.348	Lepisosteus_oculatus
ENSCPBG00000027061	PRPF19	100	94.050	ENSLAFG00000002644	PRPF19	100	94.050	Loxodonta_africana
ENSCPBG00000027061	PRPF19	100	97.619	ENSMFAG00000036743	PRPF19	100	97.619	Macaca_fascicularis
ENSCPBG00000027061	PRPF19	100	97.619	ENSMMUG00000014530	PRPF19	100	97.619	Macaca_mulatta
ENSCPBG00000027061	PRPF19	100	97.619	ENSMNEG00000044485	PRPF19	100	97.619	Macaca_nemestrina
ENSCPBG00000027061	PRPF19	100	97.619	ENSMLEG00000043312	PRPF19	100	97.619	Mandrillus_leucophaeus
ENSCPBG00000027061	PRPF19	100	84.752	ENSMAMG00000006843	prpf19	100	85.747	Mastacembelus_armatus
ENSCPBG00000027061	PRPF19	100	84.356	ENSMZEG00005013356	prpf19	100	85.520	Maylandia_zebra
ENSCPBG00000027061	PRPF19	98	90.782	ENSMGAG00000003180	PRPF19	97	93.803	Meleagris_gallopavo
ENSCPBG00000027061	PRPF19	100	96.627	ENSMAUG00000012585	Prpf19	100	96.627	Mesocricetus_auratus
ENSCPBG00000027061	PRPF19	100	97.619	ENSMICG00000011236	PRPF19	100	97.619	Microcebus_murinus
ENSCPBG00000027061	PRPF19	100	97.421	ENSMOCG00000010383	Prpf19	100	97.421	Microtus_ochrogaster
ENSCPBG00000027061	PRPF19	100	84.325	ENSMMOG00000003138	prpf19	100	85.488	Mola_mola
ENSCPBG00000027061	PRPF19	100	98.016	ENSMODG00000020338	PRPF19	100	98.016	Monodelphis_domestica
ENSCPBG00000027061	PRPF19	99	76.218	ENSMALG00000010981	prpf19	99	76.507	Monopterus_albus
ENSCPBG00000027061	PRPF19	100	97.421	MGP_CAROLIEiJ_G0022704	Prpf19	100	97.421	Mus_caroli
ENSCPBG00000027061	PRPF19	100	97.421	ENSMUSG00000024735	Prpf19	100	97.421	Mus_musculus
ENSCPBG00000027061	PRPF19	100	97.421	MGP_PahariEiJ_G0014198	Prpf19	100	97.421	Mus_pahari
ENSCPBG00000027061	PRPF19	100	97.421	MGP_SPRETEiJ_G0023618	Prpf19	100	97.421	Mus_spretus
ENSCPBG00000027061	PRPF19	100	97.619	ENSMPUG00000014432	PRPF19	100	97.619	Mustela_putorius_furo
ENSCPBG00000027061	PRPF19	100	94.220	ENSMLUG00000017597	PRPF19	100	94.220	Myotis_lucifugus
ENSCPBG00000027061	PRPF19	100	97.421	ENSNGAG00000012671	Prpf19	100	97.421	Nannospalax_galili
ENSCPBG00000027061	PRPF19	100	84.356	ENSNBRG00000000055	prpf19	100	85.520	Neolamprologus_brichardi
ENSCPBG00000027061	PRPF19	100	97.619	ENSNLEG00000013618	PRPF19	100	97.619	Nomascus_leucogenys
ENSCPBG00000027061	PRPF19	95	97.419	ENSOPRG00000008630	PRPF19	100	93.360	Ochotona_princeps
ENSCPBG00000027061	PRPF19	100	96.825	ENSODEG00000004043	PRPF19	100	96.825	Octodon_degus
ENSCPBG00000027061	PRPF19	100	84.356	ENSONIG00000004880	prpf19	100	85.520	Oreochromis_niloticus
ENSCPBG00000027061	PRPF19	100	93.714	ENSOCUG00000015689	PRPF19	100	93.714	Oryctolagus_cuniculus
ENSCPBG00000027061	PRPF19	100	84.356	ENSORLG00000004666	prpf19	100	85.294	Oryzias_latipes
ENSCPBG00000027061	PRPF19	100	84.356	ENSORLG00020013561	prpf19	100	85.294	Oryzias_latipes_hni
ENSCPBG00000027061	PRPF19	100	84.356	ENSORLG00015022196	prpf19	100	85.294	Oryzias_latipes_hsok
ENSCPBG00000027061	PRPF19	100	83.564	ENSOMEG00000004424	prpf19	100	84.615	Oryzias_melastigma
ENSCPBG00000027061	PRPF19	100	97.421	ENSOGAG00000016756	PRPF19	100	97.421	Otolemur_garnettii
ENSCPBG00000027061	PRPF19	100	97.817	ENSOARG00000015596	PRPF19	100	97.817	Ovis_aries
ENSCPBG00000027061	PRPF19	99	95.678	ENSPPAG00000030246	PRPF19	100	95.678	Pan_paniscus
ENSCPBG00000027061	PRPF19	100	97.619	ENSPPRG00000002470	PRPF19	100	97.619	Panthera_pardus
ENSCPBG00000027061	PRPF19	99	97.586	ENSPTIG00000006541	PRPF19	99	97.586	Panthera_tigris_altaica
ENSCPBG00000027061	PRPF19	100	97.619	ENSPTRG00000003724	PRPF19	100	97.619	Pan_troglodytes
ENSCPBG00000027061	PRPF19	100	97.619	ENSPANG00000002762	PRPF19	100	97.619	Papio_anubis
ENSCPBG00000027061	PRPF19	100	84.554	ENSPKIG00000019715	prpf19	100	85.520	Paramormyrops_kingsleyae
ENSCPBG00000027061	PRPF19	83	99.045	ENSPSIG00000007497	PRPF19	100	99.045	Pelodiscus_sinensis
ENSCPBG00000027061	PRPF19	100	84.325	ENSPMGG00000017527	prpf19	100	85.261	Periophthalmus_magnuspinnatus
ENSCPBG00000027061	PRPF19	54	31.111	ENSPMGG00000006948	wdr36	54	31.111	Periophthalmus_magnuspinnatus
ENSCPBG00000027061	PRPF19	100	96.627	ENSPEMG00000019270	Prpf19	100	96.627	Peromyscus_maniculatus_bairdii
ENSCPBG00000027061	PRPF19	99	97.430	ENSPCIG00000003485	PRPF19	79	97.430	Phascolarctos_cinereus
ENSCPBG00000027061	PRPF19	100	83.960	ENSPFOG00000002558	prpf19	100	85.294	Poecilia_formosa
ENSCPBG00000027061	PRPF19	100	83.960	ENSPLAG00000017942	prpf19	100	85.294	Poecilia_latipinna
ENSCPBG00000027061	PRPF19	100	83.960	ENSPMEG00000008638	prpf19	100	85.294	Poecilia_mexicana
ENSCPBG00000027061	PRPF19	100	86.136	ENSPREG00000002489	prpf19	96	86.136	Poecilia_reticulata
ENSCPBG00000027061	PRPF19	100	95.876	ENSPPYG00000003202	PRPF19	92	95.876	Pongo_abelii
ENSCPBG00000027061	PRPF19	100	97.024	ENSPCAG00000001930	PRPF19	100	97.024	Procavia_capensis
ENSCPBG00000027061	PRPF19	100	97.458	ENSPCOG00000014017	PRPF19	100	97.458	Propithecus_coquereli
ENSCPBG00000027061	PRPF19	100	97.619	ENSPVAG00000014669	PRPF19	100	97.619	Pteropus_vampyrus
ENSCPBG00000027061	PRPF19	100	84.356	ENSPNYG00000000859	prpf19	100	85.520	Pundamilia_nyererei
ENSCPBG00000027061	PRPF19	100	85.149	ENSPNAG00000019245	prpf19	100	85.973	Pygocentrus_nattereri
ENSCPBG00000027061	PRPF19	100	97.421	ENSRNOG00000020897	Prpf19	100	97.421	Rattus_norvegicus
ENSCPBG00000027061	PRPF19	100	97.619	ENSRBIG00000036672	PRPF19	100	97.619	Rhinopithecus_bieti
ENSCPBG00000027061	PRPF19	100	97.619	ENSRROG00000041572	PRPF19	100	97.619	Rhinopithecus_roxellana
ENSCPBG00000027061	PRPF19	100	97.421	ENSSBOG00000022840	PRPF19	100	97.421	Saimiri_boliviensis_boliviensis
ENSCPBG00000027061	PRPF19	100	97.619	ENSSHAG00000009462	PRPF19	100	97.619	Sarcophilus_harrisii
ENSCPBG00000027061	PRPF19	100	83.135	ENSSFOG00015001236	prpf19	100	84.127	Scleropages_formosus
ENSCPBG00000027061	PRPF19	100	85.149	ENSSMAG00000002273	prpf19	100	86.425	Scophthalmus_maximus
ENSCPBG00000027061	PRPF19	100	84.950	ENSSDUG00000003299	prpf19	100	86.199	Seriola_dumerili
ENSCPBG00000027061	PRPF19	100	84.950	ENSSLDG00000003019	prpf19	100	86.199	Seriola_lalandi_dorsalis
ENSCPBG00000027061	PRPF19	100	97.024	ENSSPUG00000019328	PRPF19	100	97.024	Sphenodon_punctatus
ENSCPBG00000027061	PRPF19	100	85.149	ENSSPAG00000008546	prpf19	100	86.199	Stegastes_partitus
ENSCPBG00000027061	PRPF19	100	97.619	ENSSSCG00000013107	PRPF19	100	97.669	Sus_scrofa
ENSCPBG00000027061	PRPF19	100	97.421	ENSTGUG00000006319	PRPF19	100	97.421	Taeniopygia_guttata
ENSCPBG00000027061	PRPF19	100	83.564	ENSTRUG00000008502	prpf19	100	84.842	Takifugu_rubripes
ENSCPBG00000027061	PRPF19	100	67.723	ENSTNIG00000014219	prpf19	100	67.723	Tetraodon_nigroviridis
ENSCPBG00000027061	PRPF19	100	97.421	ENSTTRG00000012476	PRPF19	100	97.421	Tursiops_truncatus
ENSCPBG00000027061	PRPF19	100	97.619	ENSUAMG00000011280	PRPF19	100	97.619	Ursus_americanus
ENSCPBG00000027061	PRPF19	84	97.156	ENSUMAG00000011609	PRPF19	83	97.179	Ursus_maritimus
ENSCPBG00000027061	PRPF19	99	96.916	ENSVPAG00000010516	PRPF19	100	96.916	Vicugna_pacos
ENSCPBG00000027061	PRPF19	100	97.619	ENSVVUG00000005291	PRPF19	100	97.619	Vulpes_vulpes
ENSCPBG00000027061	PRPF19	100	85.194	ENSXETG00000011938	prpf19	100	85.194	Xenopus_tropicalis
ENSCPBG00000027061	PRPF19	100	83.960	ENSXCOG00000003141	prpf19	100	85.294	Xiphophorus_couchianus
ENSCPBG00000027061	PRPF19	100	84.158	ENSXMAG00000008485	prpf19	100	85.520	Xiphophorus_maculatus