EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027065 (Gene tree)
Gene ID: 101953636
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 12446 bases
Position: chrKK088178.1:2528221-2540666
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039286	FDF	PF09532.10	8e-24	1	1
ENSCPBP00000039286	SM-ATX	PF14438.6	2.7e-08	1	1
ENSCPBP00000039286	LSM14	PF12701.7	1.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046045	LSM14B-201	1274	-	ENSCPBP00000039286	422 (aa)	XP_005302983	UPI00038907AC

Gene Model

Click here to download ENSCPBG00000027065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027065	LSM14B	92	51.860	ENSCPBG00000001387	LSM14A	86	53.350

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027065	LSM14B	99	77.251	ENSG00000149657	LSM14B	100	78.715	Homo_sapiens
ENSCPBG00000027065	LSM14B	91	50.633	ENSAPOG00000001780	lsm14b	91	51.000	Acanthochromis_polyacanthus
ENSCPBG00000027065	LSM14B	99	84.670	ENSAMEG00000013430	LSM14B	100	84.670	Ailuropoda_melanoleuca
ENSCPBG00000027065	LSM14B	91	47.959	ENSACIG00000012266	lsm14b	92	45.946	Amphilophus_citrinellus
ENSCPBG00000027065	LSM14B	91	50.886	ENSAOCG00000012380	lsm14b	91	51.250	Amphiprion_ocellaris
ENSCPBG00000027065	LSM14B	100	45.309	ENSAOCG00000006667	LSM14B	92	45.161	Amphiprion_ocellaris
ENSCPBG00000027065	LSM14B	91	44.499	ENSAPEG00000023633	lsm14b	90	46.115	Amphiprion_percula
ENSCPBG00000027065	LSM14B	91	49.096	ENSATEG00000016603	lsm14b	91	50.254	Anabas_testudineus
ENSCPBG00000027065	LSM14B	71	39.039	ENSATEG00000015895	LSM14B	83	37.580	Anabas_testudineus
ENSCPBG00000027065	LSM14B	92	92.347	ENSAPLG00000013203	LSM14B	100	92.347	Anas_platyrhynchos
ENSCPBG00000027065	LSM14B	100	77.882	ENSACAG00000016195	LSM14B	99	77.882	Anolis_carolinensis
ENSCPBG00000027065	LSM14B	99	85.579	ENSANAG00000037915	LSM14B	99	85.579	Aotus_nancymaae
ENSCPBG00000027065	LSM14B	91	46.954	ENSACLG00000019663	lsm14b	92	48.628	Astatotilapia_calliptera
ENSCPBG00000027065	LSM14B	91	56.468	ENSAMXG00000002865	lsm14b	92	56.511	Astyanax_mexicanus
ENSCPBG00000027065	LSM14B	99	85.545	ENSBTAG00000021558	LSM14B	99	85.545	Bos_taurus
ENSCPBG00000027065	LSM14B	99	85.579	ENSCJAG00000014434	LSM14B	99	85.579	Callithrix_jacchus
ENSCPBG00000027065	LSM14B	91	85.492	ENSCAFG00000012518	LSM14B	98	85.492	Canis_familiaris
ENSCPBG00000027065	LSM14B	99	86.525	ENSCAFG00020022150	LSM14B	99	86.525	Canis_lupus_dingo
ENSCPBG00000027065	LSM14B	99	86.019	ENSCHIG00000010284	-	99	86.019	Capra_hircus
ENSCPBG00000027065	LSM14B	99	55.819	ENSCHIG00000022681	-	100	55.370	Capra_hircus
ENSCPBG00000027065	LSM14B	90	77.023	ENSTSYG00000031914	LSM14B	89	77.023	Carlito_syrichta
ENSCPBG00000027065	LSM14B	91	75.457	ENSCAPG00000013059	LSM14B	100	81.373	Cavia_aperea
ENSCPBG00000027065	LSM14B	90	75.654	ENSCPOG00000038080	LSM14B	100	81.699	Cavia_porcellus
ENSCPBG00000027065	LSM14B	99	77.541	ENSCCAG00000021267	LSM14B	99	77.541	Cebus_capucinus
ENSCPBG00000027065	LSM14B	99	63.593	ENSCCAG00000024900	-	83	71.984	Cebus_capucinus
ENSCPBG00000027065	LSM14B	99	84.834	ENSCATG00000036006	LSM14B	99	84.834	Cercocebus_atys
ENSCPBG00000027065	LSM14B	90	75.654	ENSCLAG00000003186	LSM14B	100	82.410	Chinchilla_lanigera
ENSCPBG00000027065	LSM14B	99	85.071	ENSCSAG00000015729	LSM14B	99	85.071	Chlorocebus_sabaeus
ENSCPBG00000027065	LSM14B	72	60.265	ENSCHOG00000006997	-	100	60.596	Choloepus_hoffmanni
ENSCPBG00000027065	LSM14B	90	75.131	ENSCANG00000036986	LSM14B	100	75.131	Colobus_angolensis_palliatus
ENSCPBG00000027065	LSM14B	99	78.251	ENSCGRG00001018399	Lsm14b	100	82.736	Cricetulus_griseus_chok1gshd
ENSCPBG00000027065	LSM14B	71	82.333	ENSCGRG00000006111	-	100	82.333	Cricetulus_griseus_crigri
ENSCPBG00000027065	LSM14B	58	72.951	ENSCGRG00000002484	-	100	70.492	Cricetulus_griseus_crigri
ENSCPBG00000027065	LSM14B	99	42.237	ENSCSEG00000020669	LSM14B	92	41.304	Cynoglossus_semilaevis
ENSCPBG00000027065	LSM14B	91	47.619	ENSCSEG00000004722	lsm14b	91	48.387	Cynoglossus_semilaevis
ENSCPBG00000027065	LSM14B	67	33.910	ENSCVAG00000012433	-	86	31.985	Cyprinodon_variegatus
ENSCPBG00000027065	LSM14B	100	50.345	ENSDARG00000025386	lsm14b	100	51.147	Danio_rerio
ENSCPBG00000027065	LSM14B	72	82.410	ENSDNOG00000025246	LSM14B	100	82.410	Dasypus_novemcinctus
ENSCPBG00000027065	LSM14B	91	75.389	ENSDORG00000016683	Lsm14b	100	81.759	Dipodomys_ordii
ENSCPBG00000027065	LSM14B	99	62.053	ENSETEG00000001869	-	99	60.382	Echinops_telfairi
ENSCPBG00000027065	LSM14B	62	63.985	ENSETEG00000011188	-	96	63.985	Echinops_telfairi
ENSCPBG00000027065	LSM14B	72	81.759	ENSEASG00005023218	LSM14B	100	81.759	Equus_asinus_asinus
ENSCPBG00000027065	LSM14B	99	86.288	ENSECAG00000010659	LSM14B	99	86.288	Equus_caballus
ENSCPBG00000027065	LSM14B	54	93.939	ENSEEUG00000007331	LSM14B	80	93.939	Erinaceus_europaeus
ENSCPBG00000027065	LSM14B	99	53.333	ENSELUG00000005780	lsm14b	92	55.198	Esox_lucius
ENSCPBG00000027065	LSM14B	91	48.985	ENSELUG00000016299	LSM14B	100	49.884	Esox_lucius
ENSCPBG00000027065	LSM14B	99	78.014	ENSFCAG00000003248	LSM14B	99	78.014	Felis_catus
ENSCPBG00000027065	LSM14B	91	91.473	ENSFALG00000010618	LSM14B	100	91.473	Ficedula_albicollis
ENSCPBG00000027065	LSM14B	90	74.869	ENSFDAG00000002214	LSM14B	100	81.433	Fukomys_damarensis
ENSCPBG00000027065	LSM14B	79	38.587	ENSFHEG00000003362	LSM14B	82	40.374	Fundulus_heteroclitus
ENSCPBG00000027065	LSM14B	92	45.387	ENSFHEG00000006237	lsm14b	91	46.135	Fundulus_heteroclitus
ENSCPBG00000027065	LSM14B	99	46.190	ENSGMOG00000017115	lsm14b	89	46.907	Gadus_morhua
ENSCPBG00000027065	LSM14B	100	91.121	ENSGALG00000005125	LSM14B	100	92.056	Gallus_gallus
ENSCPBG00000027065	LSM14B	70	36.610	ENSGAFG00000013723	LSM14B	87	33.700	Gambusia_affinis
ENSCPBG00000027065	LSM14B	99	46.353	ENSGAFG00000020318	lsm14b	99	45.412	Gambusia_affinis
ENSCPBG00000027065	LSM14B	92	48.866	ENSGACG00000009973	lsm14b	92	48.866	Gasterosteus_aculeatus
ENSCPBG00000027065	LSM14B	59	96.386	ENSGAGG00000004106	LSM14B	97	96.386	Gopherus_agassizii
ENSCPBG00000027065	LSM14B	92	74.485	ENSGGOG00000005630	LSM14B	100	80.719	Gorilla_gorilla
ENSCPBG00000027065	LSM14B	99	76.777	ENSHGLG00000015055	LSM14B	100	80.719	Heterocephalus_glaber_female
ENSCPBG00000027065	LSM14B	90	73.560	ENSHGLG00100015273	LSM14B	100	81.188	Heterocephalus_glaber_male
ENSCPBG00000027065	LSM14B	64	36.803	ENSHCOG00000004867	lsm14b	86	37.226	Hippocampus_comes
ENSCPBG00000027065	LSM14B	96	47.143	ENSHCOG00000018747	LSM14B	92	46.898	Hippocampus_comes
ENSCPBG00000027065	LSM14B	91	57.252	ENSIPUG00000014946	lsm14b	87	57.000	Ictalurus_punctatus
ENSCPBG00000027065	LSM14B	90	75.979	ENSSTOG00000020482	LSM14B	100	82.085	Ictidomys_tridecemlineatus
ENSCPBG00000027065	LSM14B	99	77.672	ENSJJAG00000012728	Lsm14b	100	82.085	Jaculus_jaculus
ENSCPBG00000027065	LSM14B	91	47.500	ENSKMAG00000017524	lsm14b	92	47.783	Kryptolebias_marmoratus
ENSCPBG00000027065	LSM14B	100	72.535	ENSLACG00000003849	LSM14B	100	72.535	Latimeria_chalumnae
ENSCPBG00000027065	LSM14B	100	58.565	ENSLOCG00000003746	lsm14b	100	58.565	Lepisosteus_oculatus
ENSCPBG00000027065	LSM14B	91	77.261	ENSLAFG00000007492	LSM14B	100	77.261	Loxodonta_africana
ENSCPBG00000027065	LSM14B	99	85.308	ENSMFAG00000041479	LSM14B	99	85.308	Macaca_fascicularis
ENSCPBG00000027065	LSM14B	99	77.488	ENSMMUG00000014084	LSM14B	99	77.488	Macaca_mulatta
ENSCPBG00000027065	LSM14B	99	77.488	ENSMNEG00000045573	LSM14B	99	77.488	Macaca_nemestrina
ENSCPBG00000027065	LSM14B	90	75.131	ENSMLEG00000040895	LSM14B	100	75.131	Mandrillus_leucophaeus
ENSCPBG00000027065	LSM14B	97	47.608	ENSMAMG00000024124	LSM14B	92	46.366	Mastacembelus_armatus
ENSCPBG00000027065	LSM14B	91	47.980	ENSMAMG00000020539	lsm14b	91	49.123	Mastacembelus_armatus
ENSCPBG00000027065	LSM14B	92	44.472	ENSMZEG00005026001	LSM14B	94	45.432	Maylandia_zebra
ENSCPBG00000027065	LSM14B	91	46.954	ENSMZEG00005000987	lsm14b	92	48.878	Maylandia_zebra
ENSCPBG00000027065	LSM14B	92	77.157	ENSMGAG00000005300	LSM14B	100	78.173	Meleagris_gallopavo
ENSCPBG00000027065	LSM14B	99	78.251	ENSMAUG00000020700	Lsm14b	100	83.062	Mesocricetus_auratus
ENSCPBG00000027065	LSM14B	99	86.288	ENSMICG00000014675	LSM14B	99	86.288	Microcebus_murinus
ENSCPBG00000027065	LSM14B	65	68.953	ENSMOCG00000005119	-	93	68.727	Microtus_ochrogaster
ENSCPBG00000027065	LSM14B	99	77.305	ENSMOCG00000020600	Lsm14b	100	81.433	Microtus_ochrogaster
ENSCPBG00000027065	LSM14B	91	47.666	ENSMMOG00000020042	lsm14b	95	46.988	Mola_mola
ENSCPBG00000027065	LSM14B	92	46.482	ENSMMOG00000017321	LSM14B	92	46.231	Mola_mola
ENSCPBG00000027065	LSM14B	72	85.621	ENSMODG00000016690	LSM14B	100	85.621	Monodelphis_domestica
ENSCPBG00000027065	LSM14B	95	48.515	ENSMALG00000004783	lsm14b	92	48.072	Monopterus_albus
ENSCPBG00000027065	LSM14B	93	44.717	ENSMALG00000022251	LSM14B	92	45.297	Monopterus_albus
ENSCPBG00000027065	LSM14B	99	85.579	MGP_CAROLIEiJ_G0024770	Lsm14b	99	85.343	Mus_caroli
ENSCPBG00000027065	LSM14B	99	77.778	ENSMUSG00000039108	Lsm14b	100	81.759	Mus_musculus
ENSCPBG00000027065	LSM14B	99	85.343	MGP_PahariEiJ_G0026214	Lsm14b	99	85.106	Mus_pahari
ENSCPBG00000027065	LSM14B	99	85.816	MGP_SPRETEiJ_G0025693	Lsm14b	99	85.579	Mus_spretus
ENSCPBG00000027065	LSM14B	95	80.941	ENSMPUG00000007584	LSM14B	100	80.693	Mustela_putorius_furo
ENSCPBG00000027065	LSM14B	99	77.123	ENSMLUG00000000304	LSM14B	99	76.179	Myotis_lucifugus
ENSCPBG00000027065	LSM14B	54	80.603	ENSNGAG00000016550	Lsm14b	100	80.603	Nannospalax_galili
ENSCPBG00000027065	LSM14B	90	75.916	ENSNLEG00000015757	LSM14B	100	75.916	Nomascus_leucogenys
ENSCPBG00000027065	LSM14B	72	93.960	ENSMEUG00000008267	-	76	96.503	Notamacropus_eugenii
ENSCPBG00000027065	LSM14B	99	77.778	ENSODEG00000004099	LSM14B	100	82.085	Octodon_degus
ENSCPBG00000027065	LSM14B	91	47.132	ENSONIG00000020318	lsm14b	92	49.510	Oreochromis_niloticus
ENSCPBG00000027065	LSM14B	74	70.064	ENSOANG00000003370	LSM14B	98	70.760	Ornithorhynchus_anatinus
ENSCPBG00000027065	LSM14B	91	74.479	ENSOCUG00000006279	LSM14B	100	74.479	Oryctolagus_cuniculus
ENSCPBG00000027065	LSM14B	91	46.329	ENSORLG00000013525	lsm14b	91	47.750	Oryzias_latipes
ENSCPBG00000027065	LSM14B	94	42.373	ENSORLG00000028353	LSM14B	91	40.887	Oryzias_latipes
ENSCPBG00000027065	LSM14B	64	35.766	ENSORLG00020018191	-	83	34.586	Oryzias_latipes_hni
ENSCPBG00000027065	LSM14B	91	46.329	ENSORLG00020020553	lsm14b	91	47.750	Oryzias_latipes_hni
ENSCPBG00000027065	LSM14B	91	46.329	ENSORLG00015016862	lsm14b	91	47.750	Oryzias_latipes_hsok
ENSCPBG00000027065	LSM14B	94	42.615	ENSORLG00015013157	LSM14B	91	41.133	Oryzias_latipes_hsok
ENSCPBG00000027065	LSM14B	91	46.329	ENSOMEG00000023917	lsm14b	91	47.750	Oryzias_melastigma
ENSCPBG00000027065	LSM14B	99	86.288	ENSOGAG00000003915	LSM14B	99	86.288	Otolemur_garnettii
ENSCPBG00000027065	LSM14B	92	83.590	ENSOARG00000014706	LSM14B	98	84.856	Ovis_aries
ENSCPBG00000027065	LSM14B	92	74.485	ENSPPAG00000035799	LSM14B	95	74.485	Pan_paniscus
ENSCPBG00000027065	LSM14B	99	78.014	ENSPPRG00000009197	LSM14B	99	78.014	Panthera_pardus
ENSCPBG00000027065	LSM14B	65	81.818	ENSPTIG00000021518	LSM14B	92	81.818	Panthera_tigris_altaica
ENSCPBG00000027065	LSM14B	99	77.251	ENSPTRG00000013696	LSM14B	99	77.251	Pan_troglodytes
ENSCPBG00000027065	LSM14B	99	77.251	ENSPANG00000011747	LSM14B	99	77.251	Papio_anubis
ENSCPBG00000027065	LSM14B	100	56.542	ENSPKIG00000003275	lsm14b	88	87.368	Paramormyrops_kingsleyae
ENSCPBG00000027065	LSM14B	91	84.675	ENSPSIG00000014762	LSM14B	100	94.754	Pelodiscus_sinensis
ENSCPBG00000027065	LSM14B	99	77.962	ENSPEMG00000017688	Lsm14b	100	82.085	Peromyscus_maniculatus_bairdii
ENSCPBG00000027065	LSM14B	99	80.095	ENSPCIG00000013405	LSM14B	99	80.095	Phascolarctos_cinereus
ENSCPBG00000027065	LSM14B	99	47.796	ENSPFOG00000005631	lsm14b	91	47.619	Poecilia_formosa
ENSCPBG00000027065	LSM14B	91	43.467	ENSPLAG00000005793	LSM14B	92	43.532	Poecilia_latipinna
ENSCPBG00000027065	LSM14B	99	47.564	ENSPLAG00000002449	lsm14b	91	47.368	Poecilia_latipinna
ENSCPBG00000027065	LSM14B	99	47.100	ENSPMEG00000000745	lsm14b	91	47.118	Poecilia_mexicana
ENSCPBG00000027065	LSM14B	91	42.092	ENSPMEG00000022953	LSM14B	92	42.643	Poecilia_mexicana
ENSCPBG00000027065	LSM14B	65	37.681	ENSPREG00000007828	LSM14B	87	35.636	Poecilia_reticulata
ENSCPBG00000027065	LSM14B	79	90.503	ENSPPYG00000011194	LSM14B	99	71.226	Pongo_abelii
ENSCPBG00000027065	LSM14B	99	78.723	ENSPCOG00000013625	LSM14B	99	78.723	Propithecus_coquereli
ENSCPBG00000027065	LSM14B	82	65.714	ENSPVAG00000017918	LSM14B	100	68.091	Pteropus_vampyrus
ENSCPBG00000027065	LSM14B	91	56.709	ENSPNAG00000012777	lsm14b	92	56.750	Pygocentrus_nattereri
ENSCPBG00000027065	LSM14B	99	84.870	ENSRNOG00000054557	Lsm14b	99	84.870	Rattus_norvegicus
ENSCPBG00000027065	LSM14B	91	83.290	ENSRBIG00000033461	LSM14B	99	83.290	Rhinopithecus_bieti
ENSCPBG00000027065	LSM14B	92	75.578	ENSRROG00000042949	LSM14B	100	80.392	Rhinopithecus_roxellana
ENSCPBG00000027065	LSM14B	90	75.718	ENSSBOG00000032820	LSM14B	100	77.090	Saimiri_boliviensis_boliviensis
ENSCPBG00000027065	LSM14B	91	78.497	ENSSHAG00000015528	LSM14B	100	85.016	Sarcophilus_harrisii
ENSCPBG00000027065	LSM14B	91	53.788	ENSSFOG00015004627	lsm14b	92	55.224	Scleropages_formosus
ENSCPBG00000027065	LSM14B	91	49.497	ENSSMAG00000012725	lsm14b	91	49.630	Scophthalmus_maximus
ENSCPBG00000027065	LSM14B	97	48.463	ENSSMAG00000000135	LSM14B	92	47.146	Scophthalmus_maximus
ENSCPBG00000027065	LSM14B	93	48.030	ENSSDUG00000022770	LSM14B	92	47.891	Seriola_dumerili
ENSCPBG00000027065	LSM14B	91	50.376	ENSSDUG00000020977	lsm14b	91	50.248	Seriola_dumerili
ENSCPBG00000027065	LSM14B	65	37.809	ENSSLDG00000011354	-	89	40.925	Seriola_lalandi_dorsalis
ENSCPBG00000027065	LSM14B	100	89.858	ENSSPUG00000014360	LSM14B	100	89.858	Sphenodon_punctatus
ENSCPBG00000027065	LSM14B	69	36.824	ENSSPAG00000018854	-	88	32.639	Stegastes_partitus
ENSCPBG00000027065	LSM14B	91	49.100	ENSSPAG00000020915	lsm14b	90	48.731	Stegastes_partitus
ENSCPBG00000027065	LSM14B	99	84.834	ENSSSCG00000026052	LSM14B	100	80.719	Sus_scrofa
ENSCPBG00000027065	LSM14B	91	81.654	ENSTGUG00000007884	LSM14B	100	81.654	Taeniopygia_guttata
ENSCPBG00000027065	LSM14B	93	46.667	ENSTRUG00000001529	LSM14B	92	46.020	Takifugu_rubripes
ENSCPBG00000027065	LSM14B	99	48.605	ENSTRUG00000011354	lsm14b	91	48.995	Takifugu_rubripes
ENSCPBG00000027065	LSM14B	92	49.876	ENSTNIG00000002445	lsm14b	91	49.754	Tetraodon_nigroviridis
ENSCPBG00000027065	LSM14B	84	94.872	ENSTTRG00000011043	LSM14B	82	94.872	Tursiops_truncatus
ENSCPBG00000027065	LSM14B	98	79.808	ENSUAMG00000025298	LSM14B	99	79.808	Ursus_americanus
ENSCPBG00000027065	LSM14B	98	79.808	ENSUMAG00000000480	LSM14B	99	79.808	Ursus_maritimus
ENSCPBG00000027065	LSM14B	91	75.907	ENSVVUG00000015920	LSM14B	100	82.410	Vulpes_vulpes
ENSCPBG00000027065	LSM14B	86	76.423	ENSXETG00000001997	lsm14b	99	74.797	Xenopus_tropicalis
ENSCPBG00000027065	LSM14B	99	46.047	ENSXMAG00000010013	lsm14b	91	45.614	Xiphophorus_maculatus