EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000027105 (Gene tree)
Gene ID: 101951898
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 17125 bases
Position: chrKK088207.1:838196-855320
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039345	AD	PF09793.9	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046109	LSM12-201	1624	-	ENSCPBP00000039345	194 (aa)	XP_005302005	UPI000388C40B

Gene Model

Click here to download ENSCPBG00000027105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027105	LSM12	99	93.264	ENSG00000161654	LSM12	99	93.264	Homo_sapiens
ENSCPBG00000027105	LSM12	100	86.735	ENSAPOG00000007907	lsm12b	100	86.735	Acanthochromis_polyacanthus
ENSCPBG00000027105	LSM12	99	91.327	ENSAMEG00000018321	LSM12	99	91.327	Ailuropoda_melanoleuca
ENSCPBG00000027105	LSM12	100	84.694	ENSACIG00000008538	lsm12b	100	84.694	Amphilophus_citrinellus
ENSCPBG00000027105	LSM12	100	86.224	ENSAOCG00000021847	lsm12b	88	86.224	Amphiprion_ocellaris
ENSCPBG00000027105	LSM12	100	86.224	ENSAPEG00000002252	lsm12b	100	86.224	Amphiprion_percula
ENSCPBG00000027105	LSM12	100	84.694	ENSATEG00000005705	lsm12b	100	84.694	Anabas_testudineus
ENSCPBG00000027105	LSM12	100	93.814	ENSACAG00000004618	LSM12	100	93.814	Anolis_carolinensis
ENSCPBG00000027105	LSM12	99	93.264	ENSANAG00000029011	LSM12	99	93.264	Aotus_nancymaae
ENSCPBG00000027105	LSM12	100	85.204	ENSACLG00000026332	lsm12b	100	85.204	Astatotilapia_calliptera
ENSCPBG00000027105	LSM12	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSCPBG00000027105	LSM12	100	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSCPBG00000027105	LSM12	99	93.264	ENSBTAG00000016252	LSM12	99	93.264	Bos_taurus
ENSCPBG00000027105	LSM12	99	93.264	ENSCJAG00000048480	LSM12	99	93.264	Callithrix_jacchus
ENSCPBG00000027105	LSM12	99	93.264	ENSCAFG00000014379	LSM12	91	93.264	Canis_familiaris
ENSCPBG00000027105	LSM12	99	93.264	ENSCAFG00020012173	LSM12	99	93.264	Canis_lupus_dingo
ENSCPBG00000027105	LSM12	99	93.264	ENSCHIG00000018175	LSM12	99	93.264	Capra_hircus
ENSCPBG00000027105	LSM12	99	93.264	ENSTSYG00000036361	LSM12	99	93.264	Carlito_syrichta
ENSCPBG00000027105	LSM12	84	88.889	ENSCAPG00000009647	LSM12	89	88.889	Cavia_aperea
ENSCPBG00000027105	LSM12	99	92.228	ENSCPOG00000012860	LSM12	99	92.228	Cavia_porcellus
ENSCPBG00000027105	LSM12	99	93.264	ENSCCAG00000032905	LSM12	99	93.264	Cebus_capucinus
ENSCPBG00000027105	LSM12	99	93.264	ENSCATG00000030577	-	99	93.264	Cercocebus_atys
ENSCPBG00000027105	LSM12	99	93.264	ENSCLAG00000015759	LSM12	99	93.264	Chinchilla_lanigera
ENSCPBG00000027105	LSM12	99	93.782	ENSCSAG00000003486	LSM12	99	93.782	Chlorocebus_sabaeus
ENSCPBG00000027105	LSM12	56	89.908	ENSCHOG00000001198	LSM12	100	89.908	Choloepus_hoffmanni
ENSCPBG00000027105	LSM12	99	93.264	ENSCANG00000043328	LSM12	99	93.264	Colobus_angolensis_palliatus
ENSCPBG00000027105	LSM12	99	93.264	ENSCGRG00001002094	Lsm12	99	93.264	Cricetulus_griseus_chok1gshd
ENSCPBG00000027105	LSM12	79	92.857	ENSCGRG00000004316	Lsm12	87	92.857	Cricetulus_griseus_crigri
ENSCPBG00000027105	LSM12	100	85.204	ENSCSEG00000008434	lsm12b	100	85.204	Cynoglossus_semilaevis
ENSCPBG00000027105	LSM12	100	85.204	ENSCVAG00000008755	lsm12b	100	85.204	Cyprinodon_variegatus
ENSCPBG00000027105	LSM12	100	86.224	ENSDARG00000109510	lsm12b	100	86.224	Danio_rerio
ENSCPBG00000027105	LSM12	100	78.061	ENSDARG00000028848	lsm12a	100	78.061	Danio_rerio
ENSCPBG00000027105	LSM12	99	93.782	ENSDNOG00000002418	LSM12	90	93.782	Dasypus_novemcinctus
ENSCPBG00000027105	LSM12	99	93.264	ENSDORG00000016381	Lsm12	99	93.264	Dipodomys_ordii
ENSCPBG00000027105	LSM12	84	32.530	FBgn0030364	Lsm12	78	32.164	Drosophila_melanogaster
ENSCPBG00000027105	LSM12	78	31.515	FBgn0036057	CG14164	87	31.515	Drosophila_melanogaster
ENSCPBG00000027105	LSM12	99	92.746	ENSETEG00000008374	LSM12	99	92.746	Echinops_telfairi
ENSCPBG00000027105	LSM12	90	81.143	ENSETEG00000011012	-	100	81.143	Echinops_telfairi
ENSCPBG00000027105	LSM12	85	64.242	ENSEBUG00000016299	lsm12a	92	64.242	Eptatretus_burgeri
ENSCPBG00000027105	LSM12	99	93.264	ENSEASG00005010155	LSM12	99	93.264	Equus_asinus_asinus
ENSCPBG00000027105	LSM12	99	93.264	ENSECAG00000009071	LSM12	99	93.264	Equus_caballus
ENSCPBG00000027105	LSM12	79	92.810	ENSEEUG00000002419	-	100	92.810	Erinaceus_europaeus
ENSCPBG00000027105	LSM12	100	82.653	ENSELUG00000000256	-	100	82.653	Esox_lucius
ENSCPBG00000027105	LSM12	100	84.184	ENSELUG00000015538	lsm12b	100	79.592	Esox_lucius
ENSCPBG00000027105	LSM12	99	93.264	ENSFCAG00000037021	LSM12	99	93.264	Felis_catus
ENSCPBG00000027105	LSM12	76	92.568	ENSFDAG00000008954	LSM12	87	92.568	Fukomys_damarensis
ENSCPBG00000027105	LSM12	100	84.184	ENSFHEG00000019913	lsm12b	100	84.184	Fundulus_heteroclitus
ENSCPBG00000027105	LSM12	81	86.076	ENSGMOG00000015449	lsm12b	100	86.076	Gadus_morhua
ENSCPBG00000027105	LSM12	79	94.771	ENSGALG00000039803	LSM12	100	94.771	Gallus_gallus
ENSCPBG00000027105	LSM12	100	84.694	ENSGAFG00000011829	lsm12b	100	84.694	Gambusia_affinis
ENSCPBG00000027105	LSM12	81	86.709	ENSGACG00000003428	lsm12b	100	86.709	Gasterosteus_aculeatus
ENSCPBG00000027105	LSM12	100	98.969	ENSGAGG00000021965	LSM12	100	98.969	Gopherus_agassizii
ENSCPBG00000027105	LSM12	99	93.264	ENSGGOG00000010589	-	99	93.264	Gorilla_gorilla
ENSCPBG00000027105	LSM12	85	84.431	ENSHBUG00000007667	lsm12b	74	84.431	Haplochromis_burtoni
ENSCPBG00000027105	LSM12	99	93.264	ENSHGLG00000011411	LSM12	99	93.264	Heterocephalus_glaber_female
ENSCPBG00000027105	LSM12	91	81.768	ENSHGLG00100000241	LSM12	96	81.768	Heterocephalus_glaber_male
ENSCPBG00000027105	LSM12	100	84.694	ENSHCOG00000002094	lsm12b	100	84.694	Hippocampus_comes
ENSCPBG00000027105	LSM12	100	84.184	ENSIPUG00000014800	lsm12	100	84.184	Ictalurus_punctatus
ENSCPBG00000027105	LSM12	99	74.742	ENSIPUG00000008936	lsm12a	99	74.742	Ictalurus_punctatus
ENSCPBG00000027105	LSM12	99	93.264	ENSSTOG00000007403	LSM12	99	93.264	Ictidomys_tridecemlineatus
ENSCPBG00000027105	LSM12	97	82.105	ENSJJAG00000011793	-	100	82.105	Jaculus_jaculus
ENSCPBG00000027105	LSM12	81	81.132	ENSJJAG00000014652	-	95	81.132	Jaculus_jaculus
ENSCPBG00000027105	LSM12	99	92.228	ENSJJAG00000004364	-	99	92.228	Jaculus_jaculus
ENSCPBG00000027105	LSM12	99	76.020	ENSKMAG00000007704	lsm12b	65	76.020	Kryptolebias_marmoratus
ENSCPBG00000027105	LSM12	100	86.224	ENSLBEG00000027999	lsm12b	100	86.224	Labrus_bergylta
ENSCPBG00000027105	LSM12	100	88.144	ENSLACG00000015981	LSM12	100	88.144	Latimeria_chalumnae
ENSCPBG00000027105	LSM12	100	85.714	ENSLOCG00000013079	lsm12b	99	85.714	Lepisosteus_oculatus
ENSCPBG00000027105	LSM12	99	93.264	ENSLAFG00000005202	LSM12	99	93.264	Loxodonta_africana
ENSCPBG00000027105	LSM12	99	93.264	ENSMFAG00000031376	LSM12	99	93.264	Macaca_fascicularis
ENSCPBG00000027105	LSM12	99	93.264	ENSMMUG00000006804	LSM12	99	93.264	Macaca_mulatta
ENSCPBG00000027105	LSM12	64	77.011	ENSMMUG00000042106	-	100	77.011	Macaca_mulatta
ENSCPBG00000027105	LSM12	64	77.011	ENSMMUG00000038408	-	100	77.011	Macaca_mulatta
ENSCPBG00000027105	LSM12	99	93.264	ENSMNEG00000030594	-	99	93.264	Macaca_nemestrina
ENSCPBG00000027105	LSM12	99	93.264	ENSMLEG00000039934	LSM12	99	93.264	Mandrillus_leucophaeus
ENSCPBG00000027105	LSM12	100	85.714	ENSMAMG00000004279	lsm12b	100	85.714	Mastacembelus_armatus
ENSCPBG00000027105	LSM12	100	85.204	ENSMZEG00005005754	lsm12b	100	85.204	Maylandia_zebra
ENSCPBG00000027105	LSM12	99	93.782	ENSMICG00000037219	LSM12	99	93.782	Microcebus_murinus
ENSCPBG00000027105	LSM12	99	93.264	ENSMOCG00000019878	-	99	93.264	Microtus_ochrogaster
ENSCPBG00000027105	LSM12	99	79.275	ENSMOCG00000017015	-	85	79.275	Microtus_ochrogaster
ENSCPBG00000027105	LSM12	100	85.714	ENSMMOG00000020848	lsm12b	100	85.714	Mola_mola
ENSCPBG00000027105	LSM12	99	86.458	ENSMALG00000007578	lsm12b	98	86.458	Monopterus_albus
ENSCPBG00000027105	LSM12	99	93.264	MGP_CAROLIEiJ_G0017241	Lsm12	99	93.264	Mus_caroli
ENSCPBG00000027105	LSM12	99	93.264	ENSMUSG00000020922	Lsm12	99	93.264	Mus_musculus
ENSCPBG00000027105	LSM12	99	85.714	MGP_PahariEiJ_G0018371	Lsm12	99	85.714	Mus_pahari
ENSCPBG00000027105	LSM12	99	92.746	MGP_SPRETEiJ_G0018084	Lsm12	98	96.154	Mus_spretus
ENSCPBG00000027105	LSM12	99	92.746	ENSMLUG00000006391	LSM12	99	92.746	Myotis_lucifugus
ENSCPBG00000027105	LSM12	99	93.264	ENSNGAG00000001870	Lsm12	99	93.264	Nannospalax_galili
ENSCPBG00000027105	LSM12	98	61.616	ENSNGAG00000015429	-	98	61.616	Nannospalax_galili
ENSCPBG00000027105	LSM12	100	85.204	ENSNBRG00000006266	lsm12b	100	85.204	Neolamprologus_brichardi
ENSCPBG00000027105	LSM12	99	93.264	ENSNLEG00000005580	-	99	93.264	Nomascus_leucogenys
ENSCPBG00000027105	LSM12	84	95.092	ENSMEUG00000007501	-	99	95.092	Notamacropus_eugenii
ENSCPBG00000027105	LSM12	99	93.264	ENSOPRG00000008552	LSM12	99	93.264	Ochotona_princeps
ENSCPBG00000027105	LSM12	100	93.333	ENSODEG00000017998	-	100	93.333	Octodon_degus
ENSCPBG00000027105	LSM12	100	83.590	ENSODEG00000007886	-	74	83.590	Octodon_degus
ENSCPBG00000027105	LSM12	100	85.204	ENSONIG00000007933	lsm12b	100	85.204	Oreochromis_niloticus
ENSCPBG00000027105	LSM12	99	87.629	ENSOCUG00000021254	-	100	87.629	Oryctolagus_cuniculus
ENSCPBG00000027105	LSM12	99	91.327	ENSOCUG00000008566	-	99	91.327	Oryctolagus_cuniculus
ENSCPBG00000027105	LSM12	99	87.629	ENSOCUG00000027889	-	100	87.629	Oryctolagus_cuniculus
ENSCPBG00000027105	LSM12	99	86.598	ENSOCUG00000024823	-	100	86.598	Oryctolagus_cuniculus
ENSCPBG00000027105	LSM12	100	85.714	ENSORLG00000011310	lsm12b	100	85.714	Oryzias_latipes
ENSCPBG00000027105	LSM12	100	85.714	ENSORLG00020002060	lsm12b	92	85.714	Oryzias_latipes_hni
ENSCPBG00000027105	LSM12	100	85.714	ENSORLG00015001647	lsm12b	92	85.714	Oryzias_latipes_hsok
ENSCPBG00000027105	LSM12	100	85.714	ENSOMEG00000006184	lsm12b	92	85.714	Oryzias_melastigma
ENSCPBG00000027105	LSM12	99	93.782	ENSOGAG00000010489	LSM12	99	93.782	Otolemur_garnettii
ENSCPBG00000027105	LSM12	99	89.950	ENSOARG00000006589	LSM12	99	89.950	Ovis_aries
ENSCPBG00000027105	LSM12	99	83.420	ENSPPAG00000034974	-	91	95.000	Pan_paniscus
ENSCPBG00000027105	LSM12	99	93.264	ENSPPRG00000023420	LSM12	99	93.264	Panthera_pardus
ENSCPBG00000027105	LSM12	72	88.182	ENSPTIG00000014850	-	99	88.182	Panthera_tigris_altaica
ENSCPBG00000027105	LSM12	79	92.810	ENSPTIG00000012704	-	82	92.810	Panthera_tigris_altaica
ENSCPBG00000027105	LSM12	99	93.264	ENSPTRG00000009261	LSM12	99	93.264	Pan_troglodytes
ENSCPBG00000027105	LSM12	99	93.264	ENSPANG00000021315	-	99	93.264	Papio_anubis
ENSCPBG00000027105	LSM12	99	76.562	ENSPKIG00000017932	-	98	76.562	Paramormyrops_kingsleyae
ENSCPBG00000027105	LSM12	100	85.204	ENSPKIG00000021058	lsm12b	100	85.204	Paramormyrops_kingsleyae
ENSCPBG00000027105	LSM12	100	85.204	ENSPMGG00000021344	lsm12b	100	85.204	Periophthalmus_magnuspinnatus
ENSCPBG00000027105	LSM12	99	93.264	ENSPEMG00000012199	Lsm12	99	93.264	Peromyscus_maniculatus_bairdii
ENSCPBG00000027105	LSM12	89	66.474	ENSPMAG00000005461	lsm12a	99	66.474	Petromyzon_marinus
ENSCPBG00000027105	LSM12	99	94.301	ENSPCIG00000020244	LSM12	99	94.301	Phascolarctos_cinereus
ENSCPBG00000027105	LSM12	100	83.673	ENSPFOG00000015930	lsm12b	100	83.673	Poecilia_formosa
ENSCPBG00000027105	LSM12	100	83.673	ENSPLAG00000021089	lsm12b	100	83.673	Poecilia_latipinna
ENSCPBG00000027105	LSM12	100	83.673	ENSPMEG00000012961	lsm12b	100	83.673	Poecilia_mexicana
ENSCPBG00000027105	LSM12	88	86.550	ENSPREG00000010236	lsm12b	95	86.550	Poecilia_reticulata
ENSCPBG00000027105	LSM12	99	93.264	ENSPPYG00000008344	LSM12	99	93.264	Pongo_abelii
ENSCPBG00000027105	LSM12	82	95.597	ENSPCAG00000008790	LSM12	100	95.597	Procavia_capensis
ENSCPBG00000027105	LSM12	99	93.264	ENSPCOG00000027951	LSM12	99	93.264	Propithecus_coquereli
ENSCPBG00000027105	LSM12	99	92.746	ENSPVAG00000013706	LSM12	99	92.746	Pteropus_vampyrus
ENSCPBG00000027105	LSM12	100	85.204	ENSPNYG00000003386	lsm12b	100	85.204	Pundamilia_nyererei
ENSCPBG00000027105	LSM12	100	84.184	ENSPNAG00000004186	lsm12b	100	84.184	Pygocentrus_nattereri
ENSCPBG00000027105	LSM12	100	77.041	ENSPNAG00000018435	lsm12a	100	77.041	Pygocentrus_nattereri
ENSCPBG00000027105	LSM12	99	93.264	ENSRNOG00000020894	Lsm12	99	93.264	Rattus_norvegicus
ENSCPBG00000027105	LSM12	99	93.264	ENSRBIG00000027910	LSM12	99	93.264	Rhinopithecus_bieti
ENSCPBG00000027105	LSM12	99	55.959	ENSRROG00000000537	-	98	55.959	Rhinopithecus_roxellana
ENSCPBG00000027105	LSM12	99	93.264	ENSRROG00000045530	-	99	93.264	Rhinopithecus_roxellana
ENSCPBG00000027105	LSM12	99	93.264	ENSSBOG00000025310	LSM12	99	93.264	Saimiri_boliviensis_boliviensis
ENSCPBG00000027105	LSM12	81	92.405	ENSSHAG00000014914	LSM12	100	92.405	Sarcophilus_harrisii
ENSCPBG00000027105	LSM12	100	84.184	ENSSFOG00015009612	lsm12	100	84.184	Scleropages_formosus
ENSCPBG00000027105	LSM12	100	83.163	ENSSFOG00015020392	lsm12a	100	83.163	Scleropages_formosus
ENSCPBG00000027105	LSM12	100	85.714	ENSSMAG00000008089	lsm12b	100	85.714	Scophthalmus_maximus
ENSCPBG00000027105	LSM12	100	86.735	ENSSDUG00000012711	lsm12b	100	86.735	Seriola_dumerili
ENSCPBG00000027105	LSM12	100	86.735	ENSSLDG00000007404	lsm12b	100	86.735	Seriola_lalandi_dorsalis
ENSCPBG00000027105	LSM12	79	92.157	ENSSARG00000005537	LSM12	100	92.157	Sorex_araneus
ENSCPBG00000027105	LSM12	100	97.423	ENSSPUG00000011984	LSM12	100	97.423	Sphenodon_punctatus
ENSCPBG00000027105	LSM12	100	86.224	ENSSPAG00000017058	lsm12b	100	86.224	Stegastes_partitus
ENSCPBG00000027105	LSM12	99	93.264	ENSSSCG00000032394	LSM12	99	93.264	Sus_scrofa
ENSCPBG00000027105	LSM12	100	84.694	ENSTRUG00000007121	lsm12b	100	84.694	Takifugu_rubripes
ENSCPBG00000027105	LSM12	100	85.204	ENSTNIG00000014436	lsm12b	100	85.204	Tetraodon_nigroviridis
ENSCPBG00000027105	LSM12	99	92.746	ENSTBEG00000012523	-	99	92.746	Tupaia_belangeri
ENSCPBG00000027105	LSM12	99	89.637	ENSTBEG00000012392	-	99	89.637	Tupaia_belangeri
ENSCPBG00000027105	LSM12	99	93.264	ENSTTRG00000010433	LSM12	99	93.264	Tursiops_truncatus
ENSCPBG00000027105	LSM12	99	93.264	ENSUAMG00000006313	LSM12	99	93.264	Ursus_americanus
ENSCPBG00000027105	LSM12	81	89.873	ENSUMAG00000012987	LSM12	90	89.873	Ursus_maritimus
ENSCPBG00000027105	LSM12	99	88.601	ENSVPAG00000011145	LSM12	99	88.601	Vicugna_pacos
ENSCPBG00000027105	LSM12	99	93.264	ENSVVUG00000017581	LSM12	99	93.264	Vulpes_vulpes
ENSCPBG00000027105	LSM12	83	62.112	ENSXETG00000003371	lsm12	78	62.112	Xenopus_tropicalis
ENSCPBG00000027105	LSM12	100	84.694	ENSXCOG00000003994	lsm12b	100	84.694	Xiphophorus_couchianus
ENSCPBG00000027105	LSM12	100	84.694	ENSXMAG00000020950	lsm12b	100	84.694	Xiphophorus_maculatus