EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000027142 (Gene tree)
Gene ID: 101948356
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 10714 bases
Position: chrKK083136.1:928191-938904
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039398	zf-U1	PF06220.12	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046174	SNRPC-201	854	XM_005309685	ENSCPBP00000039398	159 (aa)	XP_005309742	UPI000388B01B

Gene Model

Click here to download ENSCPBG00000027142's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027142	SNRPC	100	97.484	ENSG00000124562	SNRPC	100	97.484	Homo_sapiens
ENSCPBG00000027142	SNRPC	100	95.597	ENSAMEG00000000963	SNRPC	87	96.815	Ailuropoda_melanoleuca
ENSCPBG00000027142	SNRPC	99	96.178	ENSACAG00000015721	SNRPC	87	96.178	Anolis_carolinensis
ENSCPBG00000027142	SNRPC	100	97.484	ENSANAG00000019696	-	100	97.484	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	93.082	ENSANAG00000019157	-	100	93.082	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	86.792	ENSANAG00000019726	-	92	87.421	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	96.855	ENSANAG00000007843	-	100	96.855	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	84.906	ENSANAG00000021026	-	100	77.987	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	73.585	ENSANAG00000021444	-	61	81.250	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	99	89.241	ENSANAG00000020588	-	92	89.241	Aotus_nancymaae
ENSCPBG00000027142	SNRPC	100	84.277	ENSAMXG00000032641	snrpc	100	71.698	Astyanax_mexicanus
ENSCPBG00000027142	SNRPC	100	97.484	ENSBTAG00000024549	SNRPC	100	97.484	Bos_taurus
ENSCPBG00000027142	SNRPC	100	94.969	ENSCJAG00000041822	-	100	94.969	Callithrix_jacchus
ENSCPBG00000027142	SNRPC	100	97.484	ENSCJAG00000015321	-	100	97.484	Callithrix_jacchus
ENSCPBG00000027142	SNRPC	100	96.226	ENSCJAG00000043055	-	100	96.226	Callithrix_jacchus
ENSCPBG00000027142	SNRPC	100	93.082	ENSCAFG00000031775	-	100	93.082	Canis_familiaris
ENSCPBG00000027142	SNRPC	100	77.358	ENSCAFG00000025525	-	100	77.358	Canis_familiaris
ENSCPBG00000027142	SNRPC	74	98.305	ENSCAFG00000001231	-	93	98.305	Canis_familiaris
ENSCPBG00000027142	SNRPC	100	86.250	ENSCAFG00000028988	-	100	86.875	Canis_familiaris
ENSCPBG00000027142	SNRPC	99	85.987	ENSCAFG00020009944	-	90	85.987	Canis_lupus_dingo
ENSCPBG00000027142	SNRPC	100	93.711	ENSCAFG00020005758	-	99	94.268	Canis_lupus_dingo
ENSCPBG00000027142	SNRPC	100	76.404	ENSCAFG00020026577	-	100	82.584	Canis_lupus_dingo
ENSCPBG00000027142	SNRPC	100	93.082	ENSCAFG00020017383	-	100	93.082	Canis_lupus_dingo
ENSCPBG00000027142	SNRPC	100	97.484	ENSCAFG00020005945	-	100	97.484	Canis_lupus_dingo
ENSCPBG00000027142	SNRPC	100	96.855	ENSCHIG00000012087	-	100	96.855	Capra_hircus
ENSCPBG00000027142	SNRPC	99	87.342	ENSTSYG00000029745	-	62	92.683	Carlito_syrichta
ENSCPBG00000027142	SNRPC	100	81.132	ENSTSYG00000025721	-	100	74.214	Carlito_syrichta
ENSCPBG00000027142	SNRPC	100	97.484	ENSTSYG00000011216	-	100	97.484	Carlito_syrichta
ENSCPBG00000027142	SNRPC	89	97.183	ENSCAPG00000005161	SNRPC	100	97.183	Cavia_aperea
ENSCPBG00000027142	SNRPC	100	97.484	ENSCPOG00000008563	SNRPC	100	97.484	Cavia_porcellus
ENSCPBG00000027142	SNRPC	98	77.564	ENSCCAG00000022209	-	95	77.564	Cebus_capucinus
ENSCPBG00000027142	SNRPC	100	67.296	ENSCCAG00000028293	-	59	89.610	Cebus_capucinus
ENSCPBG00000027142	SNRPC	100	91.824	ENSCCAG00000036059	-	89	91.824	Cebus_capucinus
ENSCPBG00000027142	SNRPC	99	79.618	ENSCCAG00000026624	-	66	73.885	Cebus_capucinus
ENSCPBG00000027142	SNRPC	98	89.103	ENSCCAG00000022751	-	95	89.103	Cebus_capucinus
ENSCPBG00000027142	SNRPC	100	97.484	ENSCATG00000035787	SNRPC	100	97.484	Cercocebus_atys
ENSCPBG00000027142	SNRPC	99	78.981	ENSCLAG00000010242	-	75	81.967	Chinchilla_lanigera
ENSCPBG00000027142	SNRPC	100	97.484	ENSCLAG00000016920	SNRPC	100	97.484	Chinchilla_lanigera
ENSCPBG00000027142	SNRPC	100	76.966	ENSCSAG00000009821	SNRPC	100	83.146	Chlorocebus_sabaeus
ENSCPBG00000027142	SNRPC	100	79.874	ENSCHOG00000011439	SNRPC	88	80.892	Choloepus_hoffmanni
ENSCPBG00000027142	SNRPC	97	49.351	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSCPBG00000027142	SNRPC	100	97.484	ENSCANG00000028035	SNRPC	100	97.484	Colobus_angolensis_palliatus
ENSCPBG00000027142	SNRPC	100	96.855	ENSCGRG00001009011	-	100	96.855	Cricetulus_griseus_chok1gshd
ENSCPBG00000027142	SNRPC	100	84.906	ENSCGRG00001021483	-	100	83.019	Cricetulus_griseus_chok1gshd
ENSCPBG00000027142	SNRPC	100	94.969	ENSCGRG00000005005	Snrpc	99	96.178	Cricetulus_griseus_crigri
ENSCPBG00000027142	SNRPC	100	96.226	ENSDNOG00000034699	-	99	96.226	Dasypus_novemcinctus
ENSCPBG00000027142	SNRPC	75	97.479	ENSDNOG00000042403	-	94	97.479	Dasypus_novemcinctus
ENSCPBG00000027142	SNRPC	95	77.483	ENSDORG00000029823	-	56	96.104	Dipodomys_ordii
ENSCPBG00000027142	SNRPC	100	78.616	ENSDORG00000005955	Snrpc	66	77.707	Dipodomys_ordii
ENSCPBG00000027142	SNRPC	98	94.231	ENSETEG00000008268	-	100	94.231	Echinops_telfairi
ENSCPBG00000027142	SNRPC	52	92.771	ENSETEG00000008756	-	75	94.805	Echinops_telfairi
ENSCPBG00000027142	SNRPC	98	90.385	ENSETEG00000011265	-	100	90.385	Echinops_telfairi
ENSCPBG00000027142	SNRPC	100	97.484	ENSEASG00005021007	SNRPC	100	97.484	Equus_asinus_asinus
ENSCPBG00000027142	SNRPC	100	97.484	ENSECAG00000026848	SNRPC	100	97.484	Equus_caballus
ENSCPBG00000027142	SNRPC	99	78.481	ENSEEUG00000014633	SNRPC	90	78.481	Erinaceus_europaeus
ENSCPBG00000027142	SNRPC	100	77.987	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSCPBG00000027142	SNRPC	77	97.561	ENSFCAG00000031775	-	72	97.561	Felis_catus
ENSCPBG00000027142	SNRPC	100	97.484	ENSFCAG00000044077	-	100	97.484	Felis_catus
ENSCPBG00000027142	SNRPC	100	98.113	ENSFALG00000003756	SNRPC	100	98.113	Ficedula_albicollis
ENSCPBG00000027142	SNRPC	100	97.484	ENSFDAG00000018111	SNRPC	100	97.484	Fukomys_damarensis
ENSCPBG00000027142	SNRPC	100	96.250	ENSGALG00000002773	SNRPC	100	96.250	Gallus_gallus
ENSCPBG00000027142	SNRPC	100	100.000	ENSGAGG00000003063	SNRPC	100	100.000	Gopherus_agassizii
ENSCPBG00000027142	SNRPC	100	97.484	ENSGGOG00000012499	SNRPC	100	97.484	Gorilla_gorilla
ENSCPBG00000027142	SNRPC	100	97.484	ENSHGLG00000013981	SNRPC	100	97.484	Heterocephalus_glaber_female
ENSCPBG00000027142	SNRPC	81	73.643	ENSHGLG00000005871	-	100	72.956	Heterocephalus_glaber_female
ENSCPBG00000027142	SNRPC	100	79.874	ENSHGLG00000017741	-	100	77.358	Heterocephalus_glaber_female
ENSCPBG00000027142	SNRPC	100	92.453	ENSHGLG00100017764	-	100	92.453	Heterocephalus_glaber_male
ENSCPBG00000027142	SNRPC	100	97.484	ENSHGLG00100009478	SNRPC	100	97.484	Heterocephalus_glaber_male
ENSCPBG00000027142	SNRPC	100	79.874	ENSHGLG00100010786	-	100	77.358	Heterocephalus_glaber_male
ENSCPBG00000027142	SNRPC	100	84.906	ENSIPUG00000024851	snrpc	100	84.906	Ictalurus_punctatus
ENSCPBG00000027142	SNRPC	100	97.484	ENSSTOG00000013786	SNRPC	100	97.484	Ictidomys_tridecemlineatus
ENSCPBG00000027142	SNRPC	100	96.855	ENSJJAG00000021741	Snrpc	100	96.855	Jaculus_jaculus
ENSCPBG00000027142	SNRPC	100	86.875	ENSLACG00000013753	SNRPC	88	89.873	Latimeria_chalumnae
ENSCPBG00000027142	SNRPC	100	97.484	ENSLAFG00000013534	SNRPC	100	97.484	Loxodonta_africana
ENSCPBG00000027142	SNRPC	100	97.484	ENSMFAG00000031764	-	100	97.484	Macaca_fascicularis
ENSCPBG00000027142	SNRPC	100	96.855	ENSMFAG00000030525	-	100	96.855	Macaca_fascicularis
ENSCPBG00000027142	SNRPC	100	87.421	ENSMMUG00000045425	-	100	87.421	Macaca_mulatta
ENSCPBG00000027142	SNRPC	100	96.226	ENSMMUG00000000869	-	97	96.226	Macaca_mulatta
ENSCPBG00000027142	SNRPC	100	96.226	ENSMMUG00000039415	-	100	96.226	Macaca_mulatta
ENSCPBG00000027142	SNRPC	100	97.484	ENSMNEG00000032731	SNRPC	100	97.484	Macaca_nemestrina
ENSCPBG00000027142	SNRPC	100	97.484	ENSMLEG00000033916	-	100	97.484	Mandrillus_leucophaeus
ENSCPBG00000027142	SNRPC	97	89.032	ENSMLEG00000040224	-	89	89.032	Mandrillus_leucophaeus
ENSCPBG00000027142	SNRPC	100	96.226	ENSMGAG00000006054	SNRPC	100	96.226	Meleagris_gallopavo
ENSCPBG00000027142	SNRPC	100	82.390	ENSMICG00000036552	-	87	78.846	Microcebus_murinus
ENSCPBG00000027142	SNRPC	100	96.855	ENSMICG00000032183	-	100	96.855	Microcebus_murinus
ENSCPBG00000027142	SNRPC	100	85.535	ENSMICG00000009130	-	100	86.164	Microcebus_murinus
ENSCPBG00000027142	SNRPC	100	96.855	ENSMICG00000007339	-	100	96.855	Microcebus_murinus
ENSCPBG00000027142	SNRPC	100	96.855	ENSMOCG00000017609	Snrpc	100	96.855	Microtus_ochrogaster
ENSCPBG00000027142	SNRPC	100	97.484	ENSMODG00000013904	-	100	97.484	Monodelphis_domestica
ENSCPBG00000027142	SNRPC	100	96.855	MGP_CAROLIEiJ_G0021308	Snrpc	100	96.855	Mus_caroli
ENSCPBG00000027142	SNRPC	100	96.855	ENSMUSG00000024217	Snrpc	100	96.855	Mus_musculus
ENSCPBG00000027142	SNRPC	74	97.458	MGP_SPRETEiJ_G0022221	-	98	97.458	Mus_spretus
ENSCPBG00000027142	SNRPC	100	95.597	ENSMPUG00000003210	SNRPC	99	96.815	Mustela_putorius_furo
ENSCPBG00000027142	SNRPC	100	95.597	ENSMLUG00000002488	SNRPC	99	96.815	Myotis_lucifugus
ENSCPBG00000027142	SNRPC	100	96.855	ENSNGAG00000019686	Snrpc	100	96.855	Nannospalax_galili
ENSCPBG00000027142	SNRPC	100	97.484	ENSNLEG00000034810	SNRPC	100	97.484	Nomascus_leucogenys
ENSCPBG00000027142	SNRPC	89	96.479	ENSMEUG00000009300	SNRPC	100	96.479	Notamacropus_eugenii
ENSCPBG00000027142	SNRPC	100	96.855	ENSODEG00000020201	-	100	96.855	Octodon_degus
ENSCPBG00000027142	SNRPC	100	97.484	ENSODEG00000017080	-	100	97.484	Octodon_degus
ENSCPBG00000027142	SNRPC	77	92.683	ENSODEG00000006008	-	88	92.683	Octodon_degus
ENSCPBG00000027142	SNRPC	100	97.484	ENSODEG00000018985	-	100	97.484	Octodon_degus
ENSCPBG00000027142	SNRPC	100	97.484	ENSODEG00000020370	-	100	97.484	Octodon_degus
ENSCPBG00000027142	SNRPC	100	96.226	ENSODEG00000019633	-	100	96.226	Octodon_degus
ENSCPBG00000027142	SNRPC	91	92.568	ENSOANG00000003405	SNRPC	100	92.568	Ornithorhynchus_anatinus
ENSCPBG00000027142	SNRPC	100	94.969	ENSOCUG00000023292	-	100	94.969	Oryctolagus_cuniculus
ENSCPBG00000027142	SNRPC	100	97.484	ENSOCUG00000026668	-	100	97.484	Oryctolagus_cuniculus
ENSCPBG00000027142	SNRPC	100	96.226	ENSOCUG00000026430	-	99	96.226	Oryctolagus_cuniculus
ENSCPBG00000027142	SNRPC	99	96.815	ENSOGAG00000008755	-	88	96.815	Otolemur_garnettii
ENSCPBG00000027142	SNRPC	97	83.766	ENSOGAG00000028405	-	99	81.169	Otolemur_garnettii
ENSCPBG00000027142	SNRPC	100	95.597	ENSOGAG00000026269	-	100	95.597	Otolemur_garnettii
ENSCPBG00000027142	SNRPC	100	97.484	ENSOARG00000010823	SNRPC	100	97.484	Ovis_aries
ENSCPBG00000027142	SNRPC	100	97.484	ENSPPAG00000043871	SNRPC	100	97.484	Pan_paniscus
ENSCPBG00000027142	SNRPC	100	97.484	ENSPPRG00000008647	-	100	97.484	Panthera_pardus
ENSCPBG00000027142	SNRPC	96	59.091	ENSPPRG00000016017	-	86	53.595	Panthera_pardus
ENSCPBG00000027142	SNRPC	97	59.355	ENSPTIG00000013329	-	50	83.117	Panthera_tigris_altaica
ENSCPBG00000027142	SNRPC	100	97.484	ENSPTIG00000021867	-	100	97.484	Panthera_tigris_altaica
ENSCPBG00000027142	SNRPC	100	97.484	ENSPTRG00000018070	SNRPC	100	97.484	Pan_troglodytes
ENSCPBG00000027142	SNRPC	100	97.484	ENSPANG00000022802	-	100	97.484	Papio_anubis
ENSCPBG00000027142	SNRPC	100	86.164	ENSPANG00000018228	-	94	86.164	Papio_anubis
ENSCPBG00000027142	SNRPC	99	98.726	ENSPSIG00000004876	SNRPC	77	98.726	Pelodiscus_sinensis
ENSCPBG00000027142	SNRPC	100	84.906	ENSPEMG00000002763	-	100	83.019	Peromyscus_maniculatus_bairdii
ENSCPBG00000027142	SNRPC	100	96.855	ENSPEMG00000010773	Snrpc	100	96.855	Peromyscus_maniculatus_bairdii
ENSCPBG00000027142	SNRPC	52	97.590	ENSPPYG00000029902	-	84	97.590	Pongo_abelii
ENSCPBG00000027142	SNRPC	99	96.815	ENSPCAG00000016885	SNRPC	90	96.815	Procavia_capensis
ENSCPBG00000027142	SNRPC	100	97.484	ENSPCOG00000004904	SNRPC	100	97.484	Propithecus_coquereli
ENSCPBG00000027142	SNRPC	99	96.178	ENSPVAG00000015597	SNRPC	87	96.178	Pteropus_vampyrus
ENSCPBG00000027142	SNRPC	100	96.855	ENSRNOG00000000493	Snrpc	100	96.855	Rattus_norvegicus
ENSCPBG00000027142	SNRPC	100	96.855	ENSRBIG00000014819	-	100	96.855	Rhinopithecus_bieti
ENSCPBG00000027142	SNRPC	100	96.855	ENSRBIG00000022998	-	100	96.855	Rhinopithecus_bieti
ENSCPBG00000027142	SNRPC	100	97.484	ENSRBIG00000037567	-	100	97.484	Rhinopithecus_bieti
ENSCPBG00000027142	SNRPC	100	97.484	ENSRROG00000041300	SNRPC	100	97.484	Rhinopithecus_roxellana
ENSCPBG00000027142	SNRPC	95	80.795	ENSSBOG00000032361	-	75	81.967	Saimiri_boliviensis_boliviensis
ENSCPBG00000027142	SNRPC	98	80.769	ENSSBOG00000023189	-	91	80.769	Saimiri_boliviensis_boliviensis
ENSCPBG00000027142	SNRPC	100	97.484	ENSSBOG00000031528	-	100	97.484	Saimiri_boliviensis_boliviensis
ENSCPBG00000027142	SNRPC	99	96.178	ENSSHAG00000000945	-	87	96.178	Sarcophilus_harrisii
ENSCPBG00000027142	SNRPC	100	73.585	ENSSARG00000008970	SNRPC	89	73.585	Sorex_araneus
ENSCPBG00000027142	SNRPC	100	96.226	ENSSPUG00000002502	SNRPC	100	96.226	Sphenodon_punctatus
ENSCPBG00000027142	SNRPC	100	97.484	ENSSSCG00000001531	SNRPC	100	97.484	Sus_scrofa
ENSCPBG00000027142	SNRPC	100	96.855	ENSTGUG00000001773	SNRPC	100	96.855	Taeniopygia_guttata
ENSCPBG00000027142	SNRPC	98	90.385	ENSTBEG00000013022	-	100	90.385	Tupaia_belangeri
ENSCPBG00000027142	SNRPC	98	71.795	ENSTBEG00000015356	-	68	89.583	Tupaia_belangeri
ENSCPBG00000027142	SNRPC	89	71.127	ENSTBEG00000016759	-	79	71.127	Tupaia_belangeri
ENSCPBG00000027142	SNRPC	100	95.597	ENSTTRG00000007827	SNRPC	86	96.815	Tursiops_truncatus
ENSCPBG00000027142	SNRPC	75	97.479	ENSUAMG00000014125	SNRPC	80	97.479	Ursus_americanus
ENSCPBG00000027142	SNRPC	100	87.079	ENSUMAG00000010869	SNRPC	100	87.079	Ursus_maritimus
ENSCPBG00000027142	SNRPC	89	71.831	ENSVPAG00000003106	SNRPC	79	71.831	Vicugna_pacos
ENSCPBG00000027142	SNRPC	97	92.208	ENSVVUG00000010467	-	87	92.308	Vulpes_vulpes
ENSCPBG00000027142	SNRPC	100	96.226	ENSVVUG00000021947	-	100	96.226	Vulpes_vulpes
ENSCPBG00000027142	SNRPC	100	89.308	ENSXETG00000024721	snrpc	100	89.308	Xenopus_tropicalis