EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027172 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5412 bases
Position: chrKK088178.1:4242021-4247432
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000039431	Nucleoplasmin	PF03066.15	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046219	-	513	-	ENSCPBP00000039431	170 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000027172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027172	-	55	37.963	ENSCPBG00000003817	NPM3	78	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027172	-	85	41.139	ENSACLG00000013812	npm1b	71	41.772	Astatotilapia_calliptera
ENSCPBG00000027172	-	75	51.799	ENSCAFG00000023359	-	52	51.799	Canis_familiaris
ENSCPBG00000027172	-	68	41.860	ENSELUG00000022123	npm1b	64	43.925	Esox_lucius
ENSCPBG00000027172	-	68	42.969	ENSLBEG00000001304	-	62	44.961	Labrus_bergylta
ENSCPBG00000027172	-	68	43.750	ENSNBRG00000014133	npm1b	68	43.750	Neolamprologus_brichardi
ENSCPBG00000027172	-	81	38.562	ENSOMEG00000003414	npm1b	54	38.562	Oryzias_melastigma
ENSCPBG00000027172	-	63	47.664	ENSPMGG00000008275	npm1b	56	53.659	Periophthalmus_magnuspinnatus
ENSCPBG00000027172	-	85	41.139	ENSPNYG00000001427	npm1b	71	41.772	Pundamilia_nyererei
ENSCPBG00000027172	-	82	66.026	ENSSPUG00000017271	-	79	69.872	Sphenodon_punctatus
ENSCPBG00000027172	-	82	55.128	ENSSPUG00000015604	-	78	58.974	Sphenodon_punctatus