EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027535 (Gene tree)
Gene ID: 101946718
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 45512 bases
Position: chr6:30176844-30222355
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000040031	ResIII	PF04851.15	3e-11	1	1
ENSCPBP00000040031	DEAD	PF00270.29	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046906	SMARCA5-201	3652	XM_005284304	ENSCPBP00000040031	1040 (aa)	XP_005284361	UPI000388BDB5

Gene Model

Click here to download ENSCPBG00000027535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027535	SMARCA5	52	43.761	ENSCPBG00000002600	CHD1L	61	43.761
ENSCPBG00000027535	SMARCA5	50	44.139	ENSCPBG00000018049	-	64	43.082
ENSCPBG00000027535	SMARCA5	95	87.449	ENSCPBG00000001146	SMARCA1	93	87.449
ENSCPBG00000027535	SMARCA5	50	40.590	ENSCPBG00000015831	CHD1	51	40.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027535	SMARCA5	96	97.994	ENSG00000153147	SMARCA5	95	97.994	Homo_sapiens
ENSCPBG00000027535	SMARCA5	96	98.098	ENSAMEG00000009585	SMARCA5	96	96.188	Ailuropoda_melanoleuca
ENSCPBG00000027535	SMARCA5	93	97.433	ENSAPLG00000009206	SMARCA5	100	97.433	Anas_platyrhynchos
ENSCPBG00000027535	SMARCA5	95	97.382	ENSACAG00000003038	SMARCA5	96	97.384	Anolis_carolinensis
ENSCPBG00000027535	SMARCA5	96	98.094	ENSANAG00000019345	SMARCA5	99	97.894	Aotus_nancymaae
ENSCPBG00000027535	SMARCA5	98	96.373	ENSBTAG00000003399	SMARCA5	95	98.195	Bos_taurus
ENSCPBG00000027535	SMARCA5	96	98.195	ENSCJAG00000002735	SMARCA5	95	98.195	Callithrix_jacchus
ENSCPBG00000027535	SMARCA5	97	97.335	ENSCAFG00000007525	SMARCA5	96	96.188	Canis_familiaris
ENSCPBG00000027535	SMARCA5	95	97.382	ENSCAFG00020025641	SMARCA5	95	96.211	Canis_lupus_dingo
ENSCPBG00000027535	SMARCA5	99	93.834	ENSCHIG00000016375	-	99	93.834	Capra_hircus
ENSCPBG00000027535	SMARCA5	97	97.241	ENSCHIG00000013730	-	96	96.090	Capra_hircus
ENSCPBG00000027535	SMARCA5	99	95.275	ENSTSYG00000009954	SMARCA5	99	98.189	Carlito_syrichta
ENSCPBG00000027535	SMARCA5	93	98.039	ENSCAPG00000013747	SMARCA5	95	98.039	Cavia_aperea
ENSCPBG00000027535	SMARCA5	96	98.094	ENSCPOG00000002259	SMARCA5	98	94.712	Cavia_porcellus
ENSCPBG00000027535	SMARCA5	96	98.195	ENSCCAG00000027215	SMARCA5	99	97.994	Cebus_capucinus
ENSCPBG00000027535	SMARCA5	96	98.094	ENSCATG00000044917	SMARCA5	95	98.094	Cercocebus_atys
ENSCPBG00000027535	SMARCA5	96	98.290	ENSCLAG00000006153	SMARCA5	100	98.290	Chinchilla_lanigera
ENSCPBG00000027535	SMARCA5	93	98.247	ENSCSAG00000003448	SMARCA5	100	98.247	Chlorocebus_sabaeus
ENSCPBG00000027535	SMARCA5	89	97.156	ENSCHOG00000011724	SMARCA5	86	97.156	Choloepus_hoffmanni
ENSCPBG00000027535	SMARCA5	96	98.193	ENSCANG00000041629	SMARCA5	95	98.094	Colobus_angolensis_palliatus
ENSCPBG00000027535	SMARCA5	97	97.619	ENSCGRG00001012719	Smarca5	94	98.295	Cricetulus_griseus_chok1gshd
ENSCPBG00000027535	SMARCA5	96	98.189	ENSCGRG00000001417	Smarca5	99	98.189	Cricetulus_griseus_crigri
ENSCPBG00000027535	SMARCA5	97	94.747	ENSDNOG00000009158	SMARCA5	95	95.687	Dasypus_novemcinctus
ENSCPBG00000027535	SMARCA5	91	89.884	ENSDORG00000003466	Smarca5	97	89.884	Dipodomys_ordii
ENSCPBG00000027535	SMARCA5	93	85.759	ENSEBUG00000014773	SMARCA5	96	85.759	Eptatretus_burgeri
ENSCPBG00000027535	SMARCA5	96	98.098	ENSEASG00005001866	SMARCA5	98	98.426	Equus_asinus_asinus
ENSCPBG00000027535	SMARCA5	96	98.098	ENSECAG00000002676	SMARCA5	95	98.295	Equus_caballus
ENSCPBG00000027535	SMARCA5	96	93.964	ENSEEUG00000013176	SMARCA5	100	93.964	Erinaceus_europaeus
ENSCPBG00000027535	SMARCA5	93	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSCPBG00000027535	SMARCA5	96	98.098	ENSFCAG00000004544	SMARCA5	96	96.188	Felis_catus
ENSCPBG00000027535	SMARCA5	93	98.247	ENSFALG00000004987	SMARCA5	100	98.247	Ficedula_albicollis
ENSCPBG00000027535	SMARCA5	96	98.491	ENSFDAG00000021016	SMARCA5	100	98.491	Fukomys_damarensis
ENSCPBG00000027535	SMARCA5	97	87.055	ENSGMOG00000007519	SMARCA5	94	89.458	Gadus_morhua
ENSCPBG00000027535	SMARCA5	100	96.161	ENSGALG00000009913	SMARCA5	100	96.161	Gallus_gallus
ENSCPBG00000027535	SMARCA5	94	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSCPBG00000027535	SMARCA5	100	99.327	ENSGAGG00000019882	SMARCA5	100	99.327	Gopherus_agassizii
ENSCPBG00000027535	SMARCA5	96	98.089	ENSGGOG00000012595	SMARCA5	99	98.089	Gorilla_gorilla
ENSCPBG00000027535	SMARCA5	97	87.933	ENSHGLG00000000317	-	95	88.566	Heterocephalus_glaber_female
ENSCPBG00000027535	SMARCA5	96	98.098	ENSHGLG00000000816	-	95	98.195	Heterocephalus_glaber_female
ENSCPBG00000027535	SMARCA5	96	98.390	ENSHGLG00100018421	-	100	98.390	Heterocephalus_glaber_male
ENSCPBG00000027535	SMARCA5	96	98.298	ENSSTOG00000010683	SMARCA5	98	95.091	Ictidomys_tridecemlineatus
ENSCPBG00000027535	SMARCA5	96	97.800	ENSJJAG00000014965	Smarca5	97	95.992	Jaculus_jaculus
ENSCPBG00000027535	SMARCA5	95	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSCPBG00000027535	SMARCA5	95	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSCPBG00000027535	SMARCA5	96	98.297	ENSLAFG00000007795	SMARCA5	95	98.295	Loxodonta_africana
ENSCPBG00000027535	SMARCA5	96	98.094	ENSMFAG00000043649	SMARCA5	95	98.094	Macaca_fascicularis
ENSCPBG00000027535	SMARCA5	96	98.094	ENSMMUG00000000829	SMARCA5	97	98.314	Macaca_mulatta
ENSCPBG00000027535	SMARCA5	96	98.094	ENSMNEG00000031916	SMARCA5	95	98.094	Macaca_nemestrina
ENSCPBG00000027535	SMARCA5	96	98.094	ENSMLEG00000042393	SMARCA5	95	98.094	Mandrillus_leucophaeus
ENSCPBG00000027535	SMARCA5	96	97.998	ENSMGAG00000003517	SMARCA5	99	97.998	Meleagris_gallopavo
ENSCPBG00000027535	SMARCA5	96	98.290	ENSMAUG00000015902	Smarca5	98	98.290	Mesocricetus_auratus
ENSCPBG00000027535	SMARCA5	96	97.900	ENSMICG00000003971	SMARCA5	99	96.700	Microcebus_murinus
ENSCPBG00000027535	SMARCA5	97	97.428	ENSMOCG00000016986	-	95	98.094	Microtus_ochrogaster
ENSCPBG00000027535	SMARCA5	100	95.433	ENSMODG00000000391	SMARCA5	100	95.433	Monodelphis_domestica
ENSCPBG00000027535	SMARCA5	96	97.700	ENSMUSG00000031715	Smarca5	96	95.894	Mus_musculus
ENSCPBG00000027535	SMARCA5	96	97.900	MGP_PahariEiJ_G0022862	Smarca5	96	96.090	Mus_pahari
ENSCPBG00000027535	SMARCA5	96	98.198	ENSMLUG00000000468	SMARCA5	95	98.395	Myotis_lucifugus
ENSCPBG00000027535	SMARCA5	98	96.680	ENSNGAG00000000441	Smarca5	95	98.195	Nannospalax_galili
ENSCPBG00000027535	SMARCA5	96	98.094	ENSNLEG00000005383	SMARCA5	95	98.094	Nomascus_leucogenys
ENSCPBG00000027535	SMARCA5	93	91.125	ENSMEUG00000001267	SMARCA5	100	91.125	Notamacropus_eugenii
ENSCPBG00000027535	SMARCA5	86	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCPBG00000027535	SMARCA5	93	98.866	ENSOANG00000013921	SMARCA5	100	98.866	Ornithorhynchus_anatinus
ENSCPBG00000027535	SMARCA5	93	98.454	ENSOCUG00000013042	SMARCA5	100	98.454	Oryctolagus_cuniculus
ENSCPBG00000027535	SMARCA5	96	97.900	ENSOGAG00000009702	SMARCA5	95	98.094	Otolemur_garnettii
ENSCPBG00000027535	SMARCA5	97	97.233	ENSOARG00000010589	SMARCA5	96	95.988	Ovis_aries
ENSCPBG00000027535	SMARCA5	96	98.189	ENSPPAG00000028523	SMARCA5	99	98.189	Pan_paniscus
ENSCPBG00000027535	SMARCA5	96	92.292	ENSPPRG00000004925	SMARCA5	96	91.398	Panthera_pardus
ENSCPBG00000027535	SMARCA5	97	97.324	ENSPTIG00000020959	SMARCA5	97	97.324	Panthera_tigris_altaica
ENSCPBG00000027535	SMARCA5	96	98.089	ENSPTRG00000016472	SMARCA5	99	98.089	Pan_troglodytes
ENSCPBG00000027535	SMARCA5	96	98.094	ENSPANG00000001175	SMARCA5	95	98.094	Papio_anubis
ENSCPBG00000027535	SMARCA5	96	89.721	ENSPKIG00000015885	SMARCA5	100	91.649	Paramormyrops_kingsleyae
ENSCPBG00000027535	SMARCA5	94	90.881	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSCPBG00000027535	SMARCA5	96	96.790	ENSPSIG00000004177	SMARCA5	100	96.790	Pelodiscus_sinensis
ENSCPBG00000027535	SMARCA5	93	90.329	ENSPMGG00000012316	SMARCA5	100	90.329	Periophthalmus_magnuspinnatus
ENSCPBG00000027535	SMARCA5	96	98.191	ENSPEMG00000008060	Smarca5	98	98.191	Peromyscus_maniculatus_bairdii
ENSCPBG00000027535	SMARCA5	97	69.745	ENSPMAG00000006011	SMARCA5	80	86.224	Petromyzon_marinus
ENSCPBG00000027535	SMARCA5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSCPBG00000027535	SMARCA5	99	96.415	ENSPCIG00000003926	SMARCA5	95	98.696	Phascolarctos_cinereus
ENSCPBG00000027535	SMARCA5	96	98.094	ENSPPYG00000015091	SMARCA5	95	98.094	Pongo_abelii
ENSCPBG00000027535	SMARCA5	86	86.357	ENSPCAG00000014230	SMARCA5	83	94.167	Procavia_capensis
ENSCPBG00000027535	SMARCA5	96	95.000	ENSPCOG00000026744	SMARCA5	99	94.774	Propithecus_coquereli
ENSCPBG00000027535	SMARCA5	96	97.998	ENSPVAG00000006482	SMARCA5	95	98.195	Pteropus_vampyrus
ENSCPBG00000027535	SMARCA5	98	88.725	ENSPNAG00000027824	SMARCA5	97	90.466	Pygocentrus_nattereri
ENSCPBG00000027535	SMARCA5	96	98.293	ENSRNOG00000018149	Smarca5	100	98.293	Rattus_norvegicus
ENSCPBG00000027535	SMARCA5	96	98.090	ENSRBIG00000044644	SMARCA5	94	98.090	Rhinopithecus_bieti
ENSCPBG00000027535	SMARCA5	96	98.090	ENSRROG00000029591	SMARCA5	99	98.090	Rhinopithecus_roxellana
ENSCPBG00000027535	SMARCA5	96	98.195	ENSSBOG00000036257	SMARCA5	95	98.195	Saimiri_boliviensis_boliviensis
ENSCPBG00000027535	SMARCA5	96	98.793	ENSSHAG00000008464	SMARCA5	100	98.793	Sarcophilus_harrisii
ENSCPBG00000027535	SMARCA5	96	89.772	ENSSFOG00015013252	SMARCA5	97	90.452	Scleropages_formosus
ENSCPBG00000027535	SMARCA5	96	97.085	ENSSPUG00000007604	SMARCA5	99	97.085	Sphenodon_punctatus
ENSCPBG00000027535	SMARCA5	98	95.459	ENSSSCG00000009047	SMARCA5	95	98.295	Sus_scrofa
ENSCPBG00000027535	SMARCA5	97	97.027	ENSTGUG00000002408	SMARCA5	99	97.027	Taeniopygia_guttata
ENSCPBG00000027535	SMARCA5	94	98.362	ENSUAMG00000023495	SMARCA5	95	96.404	Ursus_americanus
ENSCPBG00000027535	SMARCA5	96	98.000	ENSUMAG00000015324	SMARCA5	97	98.000	Ursus_maritimus
ENSCPBG00000027535	SMARCA5	96	97.998	ENSVPAG00000008982	SMARCA5	95	98.195	Vicugna_pacos
ENSCPBG00000027535	SMARCA5	98	96.471	ENSVVUG00000017473	SMARCA5	96	96.188	Vulpes_vulpes
ENSCPBG00000027535	SMARCA5	95	89.900	ENSXETG00000017566	smarca5	94	94.143	Xenopus_tropicalis