EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000027558 (Gene tree)
Gene ID: 101948264
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 33676 bases
Position: chrKK088180.1:5765172-5798847
Accession: 19070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000040069	efThoc1	PF11957.8	1.4e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000046948	THOC1-201	2151	-	ENSCPBP00000040069	656 (aa)	XP_008176876	UPI00046C0499

Gene Model

Click here to download ENSCPBG00000027558's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027558	THOC1	99	92.366	ENSG00000079134	THOC1	99	93.727	Homo_sapiens
ENSCPBG00000027558	THOC1	99	92.672	ENSAMEG00000006645	THOC1	99	92.672	Ailuropoda_melanoleuca
ENSCPBG00000027558	THOC1	93	74.020	ENSACIG00000019392	thoc1	94	74.183	Amphilophus_citrinellus
ENSCPBG00000027558	THOC1	99	70.200	ENSAOCG00000008391	thoc1	99	70.200	Amphiprion_ocellaris
ENSCPBG00000027558	THOC1	99	73.813	ENSAPEG00000001093	thoc1	99	73.813	Amphiprion_percula
ENSCPBG00000027558	THOC1	99	74.233	ENSATEG00000004783	thoc1	99	74.233	Anabas_testudineus
ENSCPBG00000027558	THOC1	99	91.821	ENSAPLG00000016149	THOC1	98	91.821	Anas_platyrhynchos
ENSCPBG00000027558	THOC1	99	91.324	ENSACAG00000008307	THOC1	97	91.172	Anolis_carolinensis
ENSCPBG00000027558	THOC1	99	91.390	ENSANAG00000033200	THOC1	99	91.390	Aotus_nancymaae
ENSCPBG00000027558	THOC1	99	73.354	ENSACLG00000016836	thoc1	99	73.354	Astatotilapia_calliptera
ENSCPBG00000027558	THOC1	93	71.680	ENSAMXG00000014708	thoc1	97	71.360	Astyanax_mexicanus
ENSCPBG00000027558	THOC1	99	92.672	ENSBTAG00000019215	THOC1	99	92.672	Bos_taurus
ENSCPBG00000027558	THOC1	72	35.041	WBGene00020172	thoc-1	69	36.111	Caenorhabditis_elegans
ENSCPBG00000027558	THOC1	99	92.519	ENSCJAG00000020450	THOC1	99	92.519	Callithrix_jacchus
ENSCPBG00000027558	THOC1	99	92.824	ENSCAFG00000018324	THOC1	99	92.824	Canis_familiaris
ENSCPBG00000027558	THOC1	99	92.824	ENSCAFG00020017894	THOC1	99	92.824	Canis_lupus_dingo
ENSCPBG00000027558	THOC1	99	92.672	ENSCHIG00000015399	THOC1	99	92.958	Capra_hircus
ENSCPBG00000027558	THOC1	99	92.824	ENSTSYG00000010585	THOC1	99	92.824	Carlito_syrichta
ENSCPBG00000027558	THOC1	97	71.053	ENSCAPG00000016270	THOC1	98	71.053	Cavia_aperea
ENSCPBG00000027558	THOC1	99	91.298	ENSCPOG00000000959	THOC1	99	91.298	Cavia_porcellus
ENSCPBG00000027558	THOC1	99	92.519	ENSCCAG00000025766	THOC1	99	92.519	Cebus_capucinus
ENSCPBG00000027558	THOC1	99	89.313	ENSCATG00000028180	THOC1	99	91.549	Cercocebus_atys
ENSCPBG00000027558	THOC1	97	92.645	ENSCLAG00000009117	THOC1	99	92.645	Chinchilla_lanigera
ENSCPBG00000027558	THOC1	99	92.672	ENSCSAG00000017631	THOC1	99	92.672	Chlorocebus_sabaeus
ENSCPBG00000027558	THOC1	89	81.720	ENSCHOG00000010609	THOC1	88	81.720	Choloepus_hoffmanni
ENSCPBG00000027558	THOC1	73	48.795	ENSCING00000007663	-	99	49.000	Ciona_intestinalis
ENSCPBG00000027558	THOC1	93	46.741	ENSCSAVG00000010649	-	99	46.264	Ciona_savignyi
ENSCPBG00000027558	THOC1	99	92.519	ENSCANG00000034265	THOC1	99	92.519	Colobus_angolensis_palliatus
ENSCPBG00000027558	THOC1	99	92.061	ENSCGRG00001016464	Thoc1	99	92.061	Cricetulus_griseus_chok1gshd
ENSCPBG00000027558	THOC1	90	75.845	ENSCGRG00000003390	-	99	75.845	Cricetulus_griseus_crigri
ENSCPBG00000027558	THOC1	98	91.950	ENSCGRG00000010269	-	99	92.488	Cricetulus_griseus_crigri
ENSCPBG00000027558	THOC1	99	71.733	ENSCSEG00000012486	thoc1	99	73.473	Cynoglossus_semilaevis
ENSCPBG00000027558	THOC1	99	72.435	ENSCVAG00000020600	thoc1	99	72.435	Cyprinodon_variegatus
ENSCPBG00000027558	THOC1	99	74.924	ENSDARG00000088246	thoc1	99	74.924	Danio_rerio
ENSCPBG00000027558	THOC1	99	93.130	ENSDNOG00000019217	THOC1	99	93.130	Dasypus_novemcinctus
ENSCPBG00000027558	THOC1	97	87.774	ENSDORG00000008060	Thoc1	99	87.774	Dipodomys_ordii
ENSCPBG00000027558	THOC1	91	38.030	FBgn0037382	Hpr1	72	42.458	Drosophila_melanogaster
ENSCPBG00000027558	THOC1	91	72.222	ENSETEG00000004165	THOC1	99	72.222	Echinops_telfairi
ENSCPBG00000027558	THOC1	93	64.474	ENSEBUG00000005998	thoc1	99	65.954	Eptatretus_burgeri
ENSCPBG00000027558	THOC1	99	92.824	ENSEASG00005002549	THOC1	95	92.824	Equus_asinus_asinus
ENSCPBG00000027558	THOC1	99	93.130	ENSECAG00000009267	THOC1	89	93.130	Equus_caballus
ENSCPBG00000027558	THOC1	80	75.622	ENSEEUG00000012214	-	82	75.622	Erinaceus_europaeus
ENSCPBG00000027558	THOC1	99	74.656	ENSELUG00000023277	thoc1	99	74.656	Esox_lucius
ENSCPBG00000027558	THOC1	99	92.672	ENSFCAG00000022454	THOC1	86	92.672	Felis_catus
ENSCPBG00000027558	THOC1	97	92.535	ENSFALG00000006205	THOC1	99	92.535	Ficedula_albicollis
ENSCPBG00000027558	THOC1	99	92.593	ENSFDAG00000006842	THOC1	100	92.593	Fukomys_damarensis
ENSCPBG00000027558	THOC1	99	72.435	ENSFHEG00000008841	thoc1	99	72.435	Fundulus_heteroclitus
ENSCPBG00000027558	THOC1	99	73.507	ENSGMOG00000011486	thoc1	99	73.507	Gadus_morhua
ENSCPBG00000027558	THOC1	100	92.835	ENSGALG00000014915	THOC1	100	91.717	Gallus_gallus
ENSCPBG00000027558	THOC1	99	72.741	ENSGAFG00000021464	thoc1	99	72.741	Gambusia_affinis
ENSCPBG00000027558	THOC1	99	73.160	ENSGACG00000017361	thoc1	96	76.796	Gasterosteus_aculeatus
ENSCPBG00000027558	THOC1	100	99.390	ENSGAGG00000021230	-	98	99.390	Gopherus_agassizii
ENSCPBG00000027558	THOC1	99	92.366	ENSGGOG00000003013	THOC1	99	92.366	Gorilla_gorilla
ENSCPBG00000027558	THOC1	99	73.354	ENSHBUG00000009096	thoc1	99	73.354	Haplochromis_burtoni
ENSCPBG00000027558	THOC1	99	91.756	ENSHGLG00000003712	-	99	91.756	Heterocephalus_glaber_female
ENSCPBG00000027558	THOC1	79	85.052	ENSHGLG00000009264	-	99	85.052	Heterocephalus_glaber_female
ENSCPBG00000027558	THOC1	77	84.021	ENSHGLG00100002225	-	99	84.021	Heterocephalus_glaber_male
ENSCPBG00000027558	THOC1	99	91.756	ENSHGLG00100003570	THOC1	99	91.756	Heterocephalus_glaber_male
ENSCPBG00000027558	THOC1	88	74.242	ENSIPUG00000005306	thoc1	99	73.485	Ictalurus_punctatus
ENSCPBG00000027558	THOC1	99	92.824	ENSSTOG00000006484	THOC1	99	92.824	Ictidomys_tridecemlineatus
ENSCPBG00000027558	THOC1	52	89.706	ENSJJAG00000014893	-	96	89.706	Jaculus_jaculus
ENSCPBG00000027558	THOC1	99	71.933	ENSKMAG00000003904	thoc1	99	71.933	Kryptolebias_marmoratus
ENSCPBG00000027558	THOC1	99	73.507	ENSLBEG00000020372	thoc1	98	73.507	Labrus_bergylta
ENSCPBG00000027558	THOC1	100	82.344	ENSLACG00000014869	THOC1	100	82.040	Latimeria_chalumnae
ENSCPBG00000027558	THOC1	99	77.982	ENSLOCG00000002097	thoc1	99	77.829	Lepisosteus_oculatus
ENSCPBG00000027558	THOC1	99	92.824	ENSLAFG00000009585	THOC1	99	92.824	Loxodonta_africana
ENSCPBG00000027558	THOC1	99	92.672	ENSMFAG00000041520	THOC1	99	92.672	Macaca_fascicularis
ENSCPBG00000027558	THOC1	99	92.672	ENSMMUG00000004662	THOC1	99	92.672	Macaca_mulatta
ENSCPBG00000027558	THOC1	99	92.672	ENSMNEG00000040177	THOC1	99	92.672	Macaca_nemestrina
ENSCPBG00000027558	THOC1	99	92.672	ENSMLEG00000034201	THOC1	99	92.672	Mandrillus_leucophaeus
ENSCPBG00000027558	THOC1	95	73.836	ENSMAMG00000016747	thoc1	99	73.836	Mastacembelus_armatus
ENSCPBG00000027558	THOC1	99	73.354	ENSMZEG00005024609	thoc1	99	73.354	Maylandia_zebra
ENSCPBG00000027558	THOC1	97	92.212	ENSMGAG00000009811	THOC1	100	92.212	Meleagris_gallopavo
ENSCPBG00000027558	THOC1	99	91.908	ENSMAUG00000010272	Thoc1	99	91.908	Mesocricetus_auratus
ENSCPBG00000027558	THOC1	99	93.130	ENSMICG00000027200	THOC1	99	93.130	Microcebus_murinus
ENSCPBG00000027558	THOC1	99	90.951	ENSMOCG00000014536	-	86	90.951	Microtus_ochrogaster
ENSCPBG00000027558	THOC1	100	80.273	ENSMOCG00000014924	-	97	79.666	Microtus_ochrogaster
ENSCPBG00000027558	THOC1	93	72.920	ENSMMOG00000011772	thoc1	100	72.920	Mola_mola
ENSCPBG00000027558	THOC1	99	94.109	ENSMODG00000021482	THOC1	99	94.109	Monodelphis_domestica
ENSCPBG00000027558	THOC1	99	73.466	ENSMALG00000021872	thoc1	99	73.466	Monopterus_albus
ENSCPBG00000027558	THOC1	99	92.214	MGP_CAROLIEiJ_G0021989	Thoc1	99	92.214	Mus_caroli
ENSCPBG00000027558	THOC1	99	92.366	ENSMUSG00000024287	Thoc1	100	93.617	Mus_musculus
ENSCPBG00000027558	THOC1	99	92.366	MGP_PahariEiJ_G0018726	Thoc1	99	92.366	Mus_pahari
ENSCPBG00000027558	THOC1	99	92.214	MGP_SPRETEiJ_G0022905	Thoc1	99	92.214	Mus_spretus
ENSCPBG00000027558	THOC1	99	92.672	ENSMPUG00000005448	THOC1	99	92.672	Mustela_putorius_furo
ENSCPBG00000027558	THOC1	60	79.849	ENSMLUG00000024912	-	100	79.849	Myotis_lucifugus
ENSCPBG00000027558	THOC1	99	92.530	ENSMLUG00000004090	-	99	92.530	Myotis_lucifugus
ENSCPBG00000027558	THOC1	90	80.699	ENSMLUG00000027965	-	99	80.976	Myotis_lucifugus
ENSCPBG00000027558	THOC1	99	72.994	ENSNGAG00000008061	-	99	72.994	Nannospalax_galili
ENSCPBG00000027558	THOC1	99	92.519	ENSNGAG00000001401	-	99	92.519	Nannospalax_galili
ENSCPBG00000027558	THOC1	96	73.659	ENSNBRG00000005991	thoc1	97	73.659	Neolamprologus_brichardi
ENSCPBG00000027558	THOC1	99	92.672	ENSNLEG00000006835	THOC1	99	92.672	Nomascus_leucogenys
ENSCPBG00000027558	THOC1	98	81.875	ENSMEUG00000009756	THOC1	100	81.875	Notamacropus_eugenii
ENSCPBG00000027558	THOC1	99	73.588	ENSOPRG00000001108	THOC1	99	73.588	Ochotona_princeps
ENSCPBG00000027558	THOC1	99	85.954	ENSODEG00000006623	THOC1	99	85.954	Octodon_degus
ENSCPBG00000027558	THOC1	99	73.466	ENSONIG00000009440	thoc1	98	73.466	Oreochromis_niloticus
ENSCPBG00000027558	THOC1	99	92.977	ENSOCUG00000011601	THOC1	99	92.977	Oryctolagus_cuniculus
ENSCPBG00000027558	THOC1	99	73.047	ENSORLG00000017629	thoc1	99	73.047	Oryzias_latipes
ENSCPBG00000027558	THOC1	99	73.047	ENSORLG00020007567	thoc1	99	73.047	Oryzias_latipes_hni
ENSCPBG00000027558	THOC1	99	73.201	ENSORLG00015007356	thoc1	99	73.201	Oryzias_latipes_hsok
ENSCPBG00000027558	THOC1	99	72.282	ENSOMEG00000008200	thoc1	99	72.282	Oryzias_melastigma
ENSCPBG00000027558	THOC1	99	89.008	ENSOGAG00000000470	THOC1	99	89.008	Otolemur_garnettii
ENSCPBG00000027558	THOC1	99	91.476	ENSOARG00000009238	THOC1	99	91.476	Ovis_aries
ENSCPBG00000027558	THOC1	99	92.366	ENSPPAG00000031812	THOC1	99	92.366	Pan_paniscus
ENSCPBG00000027558	THOC1	99	92.366	ENSPPRG00000023794	THOC1	99	92.366	Panthera_pardus
ENSCPBG00000027558	THOC1	99	92.366	ENSPTIG00000007469	THOC1	99	92.366	Panthera_tigris_altaica
ENSCPBG00000027558	THOC1	99	91.541	ENSPTRG00000009816	THOC1	99	91.541	Pan_troglodytes
ENSCPBG00000027558	THOC1	99	91.654	ENSPANG00000008665	THOC1	99	91.654	Papio_anubis
ENSCPBG00000027558	THOC1	99	73.588	ENSPKIG00000005906	thoc1	99	74.198	Paramormyrops_kingsleyae
ENSCPBG00000027558	THOC1	81	98.499	ENSPSIG00000007691	THOC1	98	98.499	Pelodiscus_sinensis
ENSCPBG00000027558	THOC1	93	73.258	ENSPMGG00000008279	thoc1	95	73.258	Periophthalmus_magnuspinnatus
ENSCPBG00000027558	THOC1	99	92.061	ENSPEMG00000021789	Thoc1	99	92.061	Peromyscus_maniculatus_bairdii
ENSCPBG00000027558	THOC1	74	94.939	ENSPCIG00000026942	THOC1	98	94.939	Phascolarctos_cinereus
ENSCPBG00000027558	THOC1	99	72.853	ENSPFOG00000011673	thoc1	99	72.853	Poecilia_formosa
ENSCPBG00000027558	THOC1	99	72.741	ENSPLAG00000019648	thoc1	99	72.741	Poecilia_latipinna
ENSCPBG00000027558	THOC1	99	72.853	ENSPMEG00000007083	thoc1	99	72.853	Poecilia_mexicana
ENSCPBG00000027558	THOC1	99	72.588	ENSPREG00000006719	thoc1	99	72.588	Poecilia_reticulata
ENSCPBG00000027558	THOC1	74	93.388	ENSPPYG00000009049	-	98	93.388	Pongo_abelii
ENSCPBG00000027558	THOC1	99	83.053	ENSPCAG00000005320	THOC1	99	81.985	Procavia_capensis
ENSCPBG00000027558	THOC1	99	92.366	ENSPCOG00000009234	THOC1	99	92.366	Propithecus_coquereli
ENSCPBG00000027558	THOC1	99	90.840	ENSPVAG00000004007	THOC1	99	90.840	Pteropus_vampyrus
ENSCPBG00000027558	THOC1	99	73.354	ENSPNYG00000019152	thoc1	99	73.354	Pundamilia_nyererei
ENSCPBG00000027558	THOC1	99	75.000	ENSPNAG00000023390	thoc1	99	74.847	Pygocentrus_nattereri
ENSCPBG00000027558	THOC1	91	83.268	ENSRNOG00000015332	Thoc1	99	83.268	Rattus_norvegicus
ENSCPBG00000027558	THOC1	99	91.692	ENSRBIG00000033738	THOC1	99	93.892	Rhinopithecus_bieti
ENSCPBG00000027558	THOC1	99	92.672	ENSRROG00000044988	THOC1	99	92.672	Rhinopithecus_roxellana
ENSCPBG00000027558	THOC1	99	92.366	ENSSBOG00000016556	THOC1	99	92.366	Saimiri_boliviensis_boliviensis
ENSCPBG00000027558	THOC1	99	94.962	ENSSHAG00000014829	THOC1	99	94.962	Sarcophilus_harrisii
ENSCPBG00000027558	THOC1	99	75.498	ENSSFOG00015021527	thoc1	99	75.498	Scleropages_formosus
ENSCPBG00000027558	THOC1	99	72.086	ENSSMAG00000018465	thoc1	99	72.086	Scophthalmus_maximus
ENSCPBG00000027558	THOC1	99	74.693	ENSSDUG00000016810	thoc1	99	74.693	Seriola_dumerili
ENSCPBG00000027558	THOC1	99	74.387	ENSSLDG00000015555	thoc1	99	74.387	Seriola_lalandi_dorsalis
ENSCPBG00000027558	THOC1	88	89.922	ENSSARG00000006910	THOC1	87	89.922	Sorex_araneus
ENSCPBG00000027558	THOC1	98	93.178	ENSSPUG00000007238	THOC1	99	93.252	Sphenodon_punctatus
ENSCPBG00000027558	THOC1	99	70.534	ENSSPAG00000018847	thoc1	99	70.534	Stegastes_partitus
ENSCPBG00000027558	THOC1	99	93.435	ENSSSCG00000025653	THOC1	94	93.435	Sus_scrofa
ENSCPBG00000027558	THOC1	100	93.598	ENSTGUG00000010204	THOC1	99	93.598	Taeniopygia_guttata
ENSCPBG00000027558	THOC1	99	72.741	ENSTRUG00000013518	thoc1	99	72.741	Takifugu_rubripes
ENSCPBG00000027558	THOC1	99	73.047	ENSTNIG00000008473	thoc1	99	73.047	Tetraodon_nigroviridis
ENSCPBG00000027558	THOC1	99	85.496	ENSTBEG00000016920	THOC1	99	85.496	Tupaia_belangeri
ENSCPBG00000027558	THOC1	99	86.107	ENSTTRG00000016664	THOC1	99	86.107	Tursiops_truncatus
ENSCPBG00000027558	THOC1	99	92.519	ENSUAMG00000002527	THOC1	99	92.519	Ursus_americanus
ENSCPBG00000027558	THOC1	99	92.519	ENSUMAG00000019693	THOC1	99	92.519	Ursus_maritimus
ENSCPBG00000027558	THOC1	77	91.542	ENSVPAG00000003726	-	77	91.542	Vicugna_pacos
ENSCPBG00000027558	THOC1	99	92.824	ENSVVUG00000004384	THOC1	99	92.824	Vulpes_vulpes
ENSCPBG00000027558	THOC1	100	81.846	ENSXETG00000003155	thoc1	98	81.846	Xenopus_tropicalis
ENSCPBG00000027558	THOC1	93	70.425	ENSXCOG00000016085	thoc1	89	70.425	Xiphophorus_couchianus
ENSCPBG00000027558	THOC1	99	72.588	ENSXMAG00000002353	thoc1	99	72.588	Xiphophorus_maculatus