EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027619 (Gene tree)
Gene ID: 101940975
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 26942 bases
Position: chrKK088180.1:6896146-6923087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000040165	MMR_HSR1	PF01926.23	8.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000047055	-	2203	-	ENSCPBP00000040165	202 (aa)	XP_008176894	UPI00046C0ACB
ENSCPBT00000047054	-	2290	-	ENSCPBP00000040164	231 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000027619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027619	-	80	35.260	ENSCPBG00000002289	RAB36	55	35.260
ENSCPBG00000027619	-	79	46.875	ENSCPBG00000025819	-	78	46.875
ENSCPBG00000027619	-	80	42.945	ENSCPBG00000025817	RAB25	76	42.945
ENSCPBG00000027619	-	97	37.313	ENSCPBG00000016033	RAB9A	92	37.313
ENSCPBG00000027619	-	84	42.353	ENSCPBG00000023927	RAB22A	87	42.353
ENSCPBG00000027619	-	81	43.030	ENSCPBG00000022559	RAB5A	76	43.030
ENSCPBG00000027619	-	80	38.554	ENSCPBG00000027605	RAB33B	73	38.554
ENSCPBG00000027619	-	81	46.951	ENSCPBG00000014614	RAB11A	75	46.951
ENSCPBG00000027619	-	80	43.558	ENSCPBG00000006855	RAB30	80	43.558
ENSCPBG00000027619	-	81	38.554	ENSCPBG00000011236	-	77	38.554
ENSCPBG00000027619	-	80	39.759	ENSCPBG00000001542	RAB9B	83	39.759
ENSCPBG00000027619	-	76	45.513	ENSCPBG00000011914	RAB19	72	45.513
ENSCPBG00000027619	-	58	31.092	ENSCPBG00000018327	ARL14	61	31.092
ENSCPBG00000027619	-	85	35.057	ENSCPBG00000020275	RAB34	67	35.057
ENSCPBG00000027619	-	75	32.450	ENSCPBG00000016544	NRAS	85	34.568
ENSCPBG00000027619	-	96	45.178	ENSCPBG00000013243	RAB1A	95	45.178
ENSCPBG00000027619	-	97	36.224	ENSCPBG00000000041	RAB6A	93	36.224
ENSCPBG00000027619	-	87	31.073	ENSCPBG00000018286	RHEB	96	31.073
ENSCPBG00000027619	-	83	46.154	ENSCPBG00000028375	RAB12	69	46.154
ENSCPBG00000027619	-	82	46.988	ENSCPBG00000012631	RAB35	76	49.677
ENSCPBG00000027619	-	80	38.889	ENSCPBG00000011715	-	70	38.889
ENSCPBG00000027619	-	56	33.043	ENSCPBG00000018802	-	86	34.127
ENSCPBG00000027619	-	75	37.500	ENSCPBG00000022640	RAB23	68	39.024
ENSCPBG00000027619	-	81	44.242	ENSCPBG00000016907	RAB15	77	44.242
ENSCPBG00000027619	-	91	43.750	ENSCPBG00000009941	RAB14	89	43.750
ENSCPBG00000027619	-	75	33.113	ENSCPBG00000013941	-	85	35.185
ENSCPBG00000027619	-	74	32.215	ENSCPBG00000015094	-	85	34.375
ENSCPBG00000027619	-	72	36.054	ENSCPBG00000022721	RRAS2	77	37.342
ENSCPBG00000027619	-	86	40.805	ENSCPBG00000021406	RAB6B	84	40.805
ENSCPBG00000027619	-	94	41.327	ENSCPBG00000012712	RAB5B	89	41.327
ENSCPBG00000027619	-	91	48.404	ENSCPBG00000023254	RAB2A	88	48.404
ENSCPBG00000027619	-	77	42.405	ENSCPBG00000011245	RAB42	80	41.401
ENSCPBG00000027619	-	89	47.283	ENSCPBG00000012691	RAB2B	84	47.283
ENSCPBG00000027619	-	81	37.952	ENSCPBG00000013681	MRAS	93	36.082
ENSCPBG00000027619	-	81	38.922	ENSCPBG00000014343	RAB7A	81	38.922
ENSCPBG00000027619	-	98	70.647	ENSCPBG00000015839	-	96	70.647
ENSCPBG00000027619	-	88	30.168	ENSCPBG00000028244	RERG	89	30.168
ENSCPBG00000027619	-	82	49.102	ENSCPBG00000022446	RAB1B	83	49.102
ENSCPBG00000027619	-	72	44.218	ENSCPBG00000012042	RAB33A	58	44.218
ENSCPBG00000027619	-	83	41.667	ENSCPBG00000014340	RAB41	78	41.667
ENSCPBG00000027619	-	77	33.125	ENSCPBG00000022284	DNAJC27	59	33.125
ENSCPBG00000027619	-	81	46.341	ENSCPBG00000017056	-	75	46.341
ENSCPBG00000027619	-	81	40.606	ENSCPBG00000001057	RAB39B	77	40.606
ENSCPBG00000027619	-	79	32.075	ENSCPBG00000009289	-	91	34.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027619	-	98	70.647	ENSAPOG00000010760	rab18a	96	70.647	Acanthochromis_polyacanthus
ENSCPBG00000027619	-	98	62.189	ENSACIG00000009617	rab18a	96	62.189	Amphilophus_citrinellus
ENSCPBG00000027619	-	98	70.647	ENSAOCG00000016233	rab18a	96	70.647	Amphiprion_ocellaris
ENSCPBG00000027619	-	98	70.647	ENSAPEG00000005392	rab18a	96	70.647	Amphiprion_percula
ENSCPBG00000027619	-	98	71.144	ENSATEG00000021911	rab18a	96	71.144	Anabas_testudineus
ENSCPBG00000027619	-	98	71.066	ENSACAG00000005463	-	96	71.066	Anolis_carolinensis
ENSCPBG00000027619	-	98	69.652	ENSACLG00000011484	rab18a	96	69.652	Astatotilapia_calliptera
ENSCPBG00000027619	-	85	74.419	ENSCING00000006838	-	86	74.419	Ciona_intestinalis
ENSCPBG00000027619	-	91	71.351	ENSCSAVG00000010348	-	93	71.351	Ciona_savignyi
ENSCPBG00000027619	-	98	71.144	ENSCSEG00000011816	rab18a	96	71.144	Cynoglossus_semilaevis
ENSCPBG00000027619	-	94	71.053	ENSCVAG00000015451	rab18a	96	70.149	Cyprinodon_variegatus
ENSCPBG00000027619	-	98	70.051	ENSDARG00000055291	rab18a	96	70.051	Danio_rerio
ENSCPBG00000027619	-	98	72.589	ENSELUG00000003805	rab18a	96	72.589	Esox_lucius
ENSCPBG00000027619	-	89	72.778	ENSFHEG00000019455	rab18a	96	69.652	Fundulus_heteroclitus
ENSCPBG00000027619	-	94	70.899	ENSGAFG00000002790	rab18a	96	69.154	Gambusia_affinis
ENSCPBG00000027619	-	98	71.212	ENSGAGG00000015642	-	96	71.212	Gopherus_agassizii
ENSCPBG00000027619	-	98	69.652	ENSHBUG00000001518	rab18a	96	69.652	Haplochromis_burtoni
ENSCPBG00000027619	-	98	70.647	ENSLBEG00000005861	rab18a	92	70.647	Labrus_bergylta
ENSCPBG00000027619	-	92	74.054	ENSLACG00000009310	rab18a	96	71.717	Latimeria_chalumnae
ENSCPBG00000027619	-	98	71.066	ENSLOCG00000007491	rab18a	96	71.066	Lepisosteus_oculatus
ENSCPBG00000027619	-	98	69.652	ENSMAMG00000014320	rab18a	96	69.652	Mastacembelus_armatus
ENSCPBG00000027619	-	98	69.154	ENSMZEG00005017235	rab18a	96	69.154	Maylandia_zebra
ENSCPBG00000027619	-	98	71.144	ENSMALG00000009813	rab18a	96	71.144	Monopterus_albus
ENSCPBG00000027619	-	98	69.652	ENSNBRG00000013507	rab18a	96	69.652	Neolamprologus_brichardi
ENSCPBG00000027619	-	89	71.667	ENSORLG00000004624	rab18a	96	68.657	Oryzias_latipes
ENSCPBG00000027619	-	89	71.667	ENSORLG00020008333	rab18a	96	68.657	Oryzias_latipes_hni
ENSCPBG00000027619	-	89	71.667	ENSORLG00015004739	rab18a	96	68.657	Oryzias_latipes_hsok
ENSCPBG00000027619	-	89	71.667	ENSOMEG00000020605	rab18a	96	68.657	Oryzias_melastigma
ENSCPBG00000027619	-	98	71.066	ENSPKIG00000009825	rab18a	96	71.066	Paramormyrops_kingsleyae
ENSCPBG00000027619	-	98	69.154	ENSPMGG00000020409	-	96	69.154	Periophthalmus_magnuspinnatus
ENSCPBG00000027619	-	94	70.899	ENSPFOG00000007571	rab18a	96	69.154	Poecilia_formosa
ENSCPBG00000027619	-	94	70.899	ENSPLAG00000010104	rab18a	96	69.154	Poecilia_latipinna
ENSCPBG00000027619	-	94	70.899	ENSPMEG00000013085	rab18a	96	69.154	Poecilia_mexicana
ENSCPBG00000027619	-	94	70.899	ENSPREG00000005923	rab18a	80	69.154	Poecilia_reticulata
ENSCPBG00000027619	-	98	69.652	ENSPNYG00000007064	rab18a	96	69.652	Pundamilia_nyererei
ENSCPBG00000027619	-	97	71.282	ENSPNAG00000011548	rab18a	97	71.282	Pygocentrus_nattereri
ENSCPBG00000027619	-	98	71.574	ENSSFOG00015017444	rab18a	81	71.574	Scleropages_formosus
ENSCPBG00000027619	-	89	72.928	ENSSMAG00000002969	rab18a	96	69.307	Scophthalmus_maximus
ENSCPBG00000027619	-	89	74.444	ENSSDUG00000003823	rab18a	96	71.144	Seriola_dumerili
ENSCPBG00000027619	-	89	74.444	ENSSLDG00000006977	rab18a	96	71.144	Seriola_lalandi_dorsalis
ENSCPBG00000027619	-	93	73.797	ENSSPUG00000017677	-	96	71.500	Sphenodon_punctatus
ENSCPBG00000027619	-	98	71.642	ENSTRUG00000004984	rab18a	96	71.642	Takifugu_rubripes
ENSCPBG00000027619	-	93	73.404	ENSUMAG00000015574	-	96	71.144	Ursus_maritimus
ENSCPBG00000027619	-	89	76.111	ENSXETG00000004556	rab18	96	71.212	Xenopus_tropicalis
ENSCPBG00000027619	-	94	70.899	ENSXMAG00000024122	rab18a	96	69.154	Xiphophorus_maculatus