EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000027975 (Gene tree)
Gene ID: 101931026
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 3104 bases
Position: chrKK088222.1:10486180-10489283
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000040742	RRM_1	PF00076.22	6.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000047734	-	1589	-	ENSCPBP00000040742	221 (aa)	XP_005297608	UPI0000000C2A

Gene Model

Click here to download ENSCPBG00000027975's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG
cpic05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000027975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000027975	-	51	37.190	ENSCPBG00000018252	-	64	41.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000027975	-	100	100.000	ENSG00000161547	SRSF2	100	100.000	Homo_sapiens
ENSCPBG00000027975	-	100	99.095	ENSACAG00000008553	-	100	99.095	Anolis_carolinensis
ENSCPBG00000027975	-	100	100.000	ENSANAG00000004226	SRSF2	100	100.000	Aotus_nancymaae
ENSCPBG00000027975	-	100	100.000	ENSBTAG00000018258	SRSF2	100	100.000	Bos_taurus
ENSCPBG00000027975	-	100	100.000	ENSCJAG00000041154	SRSF2	100	100.000	Callithrix_jacchus
ENSCPBG00000027975	-	100	99.548	ENSCAFG00000005147	SRSF2	100	99.548	Canis_familiaris
ENSCPBG00000027975	-	100	100.000	ENSCAFG00020006267	-	100	100.000	Canis_lupus_dingo
ENSCPBG00000027975	-	100	100.000	ENSCHIG00000017001	-	100	100.000	Capra_hircus
ENSCPBG00000027975	-	50	100.000	ENSTSYG00000006517	-	50	100.000	Carlito_syrichta
ENSCPBG00000027975	-	100	99.095	ENSCCAG00000037532	SRSF2	100	99.095	Cebus_capucinus
ENSCPBG00000027975	-	100	100.000	ENSCATG00000033650	SRSF2	100	100.000	Cercocebus_atys
ENSCPBG00000027975	-	100	100.000	ENSCSAG00000005108	SRSF2	100	100.000	Chlorocebus_sabaeus
ENSCPBG00000027975	-	100	100.000	ENSCANG00000028176	SRSF2	100	100.000	Colobus_angolensis_palliatus
ENSCPBG00000027975	-	100	100.000	ENSCGRG00001023483	Srsf2	100	100.000	Cricetulus_griseus_chok1gshd
ENSCPBG00000027975	-	54	94.167	ENSDARG00000057484	srsf2a	85	96.000	Danio_rerio
ENSCPBG00000027975	-	100	100.000	ENSDNOG00000000439	-	100	100.000	Dasypus_novemcinctus
ENSCPBG00000027975	-	100	100.000	ENSEASG00005004319	-	100	100.000	Equus_asinus_asinus
ENSCPBG00000027975	-	100	100.000	ENSECAG00000033515	-	100	100.000	Equus_caballus
ENSCPBG00000027975	-	100	100.000	ENSFCAG00000043466	-	100	100.000	Felis_catus
ENSCPBG00000027975	-	100	98.190	ENSGALG00000017357	SRSF2	100	98.190	Gallus_gallus
ENSCPBG00000027975	-	100	100.000	ENSGAGG00000024457	-	100	100.000	Gopherus_agassizii
ENSCPBG00000027975	-	100	92.760	ENSGGOG00000014378	SRSF2	100	92.760	Gorilla_gorilla
ENSCPBG00000027975	-	100	100.000	ENSHGLG00000017262	-	100	100.000	Heterocephalus_glaber_female
ENSCPBG00000027975	-	100	100.000	ENSJJAG00000013794	Srsf2	100	100.000	Jaculus_jaculus
ENSCPBG00000027975	-	51	95.536	ENSLACG00000013394	srsf2a	51	95.536	Latimeria_chalumnae
ENSCPBG00000027975	-	100	100.000	ENSMFAG00000045524	SRSF2	100	100.000	Macaca_fascicularis
ENSCPBG00000027975	-	100	94.570	ENSMMUG00000022413	SRSF2	100	94.570	Macaca_mulatta
ENSCPBG00000027975	-	100	100.000	ENSMNEG00000031444	SRSF2	100	100.000	Macaca_nemestrina
ENSCPBG00000027975	-	100	85.068	ENSMLEG00000025525	SRSF2	100	85.068	Mandrillus_leucophaeus
ENSCPBG00000027975	-	100	100.000	ENSMAUG00000022242	Srsf2	100	100.000	Mesocricetus_auratus
ENSCPBG00000027975	-	100	100.000	ENSMICG00000016956	-	100	100.000	Microcebus_murinus
ENSCPBG00000027975	-	99	98.630	ENSMODG00000001575	-	86	98.630	Monodelphis_domestica
ENSCPBG00000027975	-	100	100.000	MGP_CAROLIEiJ_G0017457	Srsf2	100	100.000	Mus_caroli
ENSCPBG00000027975	-	100	100.000	ENSMUSG00000034120	Srsf2	100	100.000	Mus_musculus
ENSCPBG00000027975	-	100	100.000	MGP_PahariEiJ_G0018587	Srsf2	100	100.000	Mus_pahari
ENSCPBG00000027975	-	100	100.000	MGP_SPRETEiJ_G0018303	Srsf2	100	100.000	Mus_spretus
ENSCPBG00000027975	-	100	100.000	ENSNGAG00000021718	Srsf2	100	100.000	Nannospalax_galili
ENSCPBG00000027975	-	50	100.000	ENSNLEG00000002547	SRSF2	51	100.000	Nomascus_leucogenys
ENSCPBG00000027975	-	100	100.000	ENSMEUG00000016745	-	100	100.000	Notamacropus_eugenii
ENSCPBG00000027975	-	100	100.000	ENSODEG00000014748	-	100	100.000	Octodon_degus
ENSCPBG00000027975	-	54	100.000	ENSOANG00000002695	-	100	100.000	Ornithorhynchus_anatinus
ENSCPBG00000027975	-	100	100.000	ENSOGAG00000028335	-	100	100.000	Otolemur_garnettii
ENSCPBG00000027975	-	99	49.545	ENSOARG00000018359	-	50	73.000	Ovis_aries
ENSCPBG00000027975	-	99	49.545	ENSOARG00000018667	-	50	73.000	Ovis_aries
ENSCPBG00000027975	-	100	100.000	ENSPPAG00000031433	SRSF2	100	100.000	Pan_paniscus
ENSCPBG00000027975	-	100	100.000	ENSPTRG00000009692	SRSF2	100	100.000	Pan_troglodytes
ENSCPBG00000027975	-	100	100.000	ENSPANG00000020023	SRSF2	100	100.000	Papio_anubis
ENSCPBG00000027975	-	100	100.000	ENSPCIG00000005334	-	100	100.000	Phascolarctos_cinereus
ENSCPBG00000027975	-	100	100.000	ENSPPYG00000008668	SRSF2	100	100.000	Pongo_abelii
ENSCPBG00000027975	-	100	100.000	ENSPCOG00000023806	-	100	100.000	Propithecus_coquereli
ENSCPBG00000027975	-	54	100.000	ENSPVAG00000014264	-	100	100.000	Pteropus_vampyrus
ENSCPBG00000027975	-	100	100.000	ENSRNOG00000000248	Srsf2	100	100.000	Rattus_norvegicus
ENSCPBG00000027975	-	100	100.000	ENSRBIG00000034493	SRSF2	100	100.000	Rhinopithecus_bieti
ENSCPBG00000027975	-	100	100.000	ENSRROG00000042457	SRSF2	100	100.000	Rhinopithecus_roxellana
ENSCPBG00000027975	-	100	88.688	ENSSBOG00000030904	SRSF2	100	88.688	Saimiri_boliviensis_boliviensis
ENSCPBG00000027975	-	100	99.550	ENSSHAG00000005932	-	100	99.550	Sarcophilus_harrisii
ENSCPBG00000027975	-	100	93.665	ENSSPUG00000007582	-	100	93.665	Sphenodon_punctatus
ENSCPBG00000027975	-	100	99.548	ENSSSCG00000036592	-	100	99.548	Sus_scrofa
ENSCPBG00000027975	-	64	67.832	ENSSSCG00000012212	-	51	77.000	Sus_scrofa
ENSCPBG00000027975	-	100	97.738	ENSTGUG00000007799	-	100	97.738	Taeniopygia_guttata
ENSCPBG00000027975	-	100	100.000	ENSTBEG00000014339	-	100	100.000	Tupaia_belangeri
ENSCPBG00000027975	-	100	100.000	ENSUAMG00000013403	-	100	100.000	Ursus_americanus