EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000028071 (Gene tree)
Gene ID: 101939373
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 14980 bases
Position: chrKK088222.1:12303978-12318957
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000040907	tRNA_int_end_N2	PF12928.7	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000047921	TSEN54-201	2262	-	ENSCPBP00000040907	527 (aa)	XP_005297545	UPI0003889D9C
ENSCPBT00000047922	TSEN54-202	2178	-	ENSCPBP00000040908	499 (aa)	XP_005297546	UPI000388AAC6

Gene Model

Click here to download ENSCPBG00000028071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000028071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000028071	TSEN54	99	55.263	ENSG00000182173	TSEN54	100	75.000	Homo_sapiens
ENSCPBG00000028071	TSEN54	98	48.190	ENSAPOG00000009659	tsen54	99	46.544	Acanthochromis_polyacanthus
ENSCPBG00000028071	TSEN54	98	55.086	ENSAMEG00000009414	TSEN54	98	55.086	Ailuropoda_melanoleuca
ENSCPBG00000028071	TSEN54	98	48.375	ENSAOCG00000000152	tsen54	96	48.566	Amphiprion_ocellaris
ENSCPBG00000028071	TSEN54	98	48.184	ENSAPEG00000018931	tsen54	96	48.375	Amphiprion_percula
ENSCPBG00000028071	TSEN54	98	43.902	ENSATEG00000019860	tsen54	97	45.113	Anabas_testudineus
ENSCPBG00000028071	TSEN54	87	69.298	ENSAPLG00000009419	TSEN54	99	69.298	Anas_platyrhynchos
ENSCPBG00000028071	TSEN54	99	64.259	ENSACAG00000006714	TSEN54	99	64.259	Anolis_carolinensis
ENSCPBG00000028071	TSEN54	99	54.735	ENSANAG00000024061	TSEN54	99	55.576	Aotus_nancymaae
ENSCPBG00000028071	TSEN54	98	47.269	ENSACLG00000019800	tsen54	97	47.297	Astatotilapia_calliptera
ENSCPBG00000028071	TSEN54	98	48.654	ENSAMXG00000006546	tsen54	97	48.473	Astyanax_mexicanus
ENSCPBG00000028071	TSEN54	99	54.749	ENSBTAG00000000824	TSEN54	99	55.784	Bos_taurus
ENSCPBG00000028071	TSEN54	99	54.735	ENSCJAG00000014278	TSEN54	99	55.576	Callithrix_jacchus
ENSCPBG00000028071	TSEN54	99	56.075	ENSCAFG00000004798	TSEN54	99	56.075	Canis_familiaris
ENSCPBG00000028071	TSEN54	99	56.075	ENSCAFG00020000312	TSEN54	99	56.075	Canis_lupus_dingo
ENSCPBG00000028071	TSEN54	99	54.869	ENSCHIG00000019908	TSEN54	99	54.869	Capra_hircus
ENSCPBG00000028071	TSEN54	87	53.219	ENSTSYG00000037439	TSEN54	99	53.648	Carlito_syrichta
ENSCPBG00000028071	TSEN54	99	55.408	ENSCCAG00000036624	TSEN54	99	55.576	Cebus_capucinus
ENSCPBG00000028071	TSEN54	98	55.513	ENSCATG00000042877	TSEN54	99	55.472	Cercocebus_atys
ENSCPBG00000028071	TSEN54	98	55.470	ENSCLAG00000002924	TSEN54	99	55.243	Chinchilla_lanigera
ENSCPBG00000028071	TSEN54	99	54.135	ENSCSAG00000004809	TSEN54	99	54.991	Chlorocebus_sabaeus
ENSCPBG00000028071	TSEN54	99	54.991	ENSCANG00000028053	TSEN54	99	55.179	Colobus_angolensis_palliatus
ENSCPBG00000028071	TSEN54	99	54.851	ENSCGRG00001020029	Tsen54	99	54.851	Cricetulus_griseus_chok1gshd
ENSCPBG00000028071	TSEN54	85	52.539	ENSCGRG00000016289	Tsen54	99	52.539	Cricetulus_griseus_crigri
ENSCPBG00000028071	TSEN54	82	39.545	ENSCSEG00000020586	tsen54	99	39.545	Cynoglossus_semilaevis
ENSCPBG00000028071	TSEN54	82	47.113	ENSDARG00000036844	tsen54	100	47.344	Danio_rerio
ENSCPBG00000028071	TSEN54	99	54.766	ENSDNOG00000018452	TSEN54	99	55.888	Dasypus_novemcinctus
ENSCPBG00000028071	TSEN54	99	55.094	ENSDORG00000004073	Tsen54	99	55.472	Dipodomys_ordii
ENSCPBG00000028071	TSEN54	97	36.364	ENSEBUG00000005203	TSEN54	95	36.174	Eptatretus_burgeri
ENSCPBG00000028071	TSEN54	99	55.993	ENSEASG00005000579	TSEN54	99	55.993	Equus_asinus_asinus
ENSCPBG00000028071	TSEN54	99	55.805	ENSECAG00000004924	TSEN54	99	55.805	Equus_caballus
ENSCPBG00000028071	TSEN54	87	53.548	ENSEEUG00000008467	TSEN54	99	53.978	Erinaceus_europaeus
ENSCPBG00000028071	TSEN54	98	45.009	ENSELUG00000017703	tsen54	90	45.009	Esox_lucius
ENSCPBG00000028071	TSEN54	99	55.722	ENSFCAG00000023712	TSEN54	99	55.910	Felis_catus
ENSCPBG00000028071	TSEN54	96	68.379	ENSFALG00000001119	TSEN54	97	67.113	Ficedula_albicollis
ENSCPBG00000028071	TSEN54	87	54.367	ENSFDAG00000019090	TSEN54	99	54.367	Fukomys_damarensis
ENSCPBG00000028071	TSEN54	98	47.002	ENSFHEG00000005470	tsen54	97	47.969	Fundulus_heteroclitus
ENSCPBG00000028071	TSEN54	84	47.027	ENSGMOG00000013146	tsen54	99	47.027	Gadus_morhua
ENSCPBG00000028071	TSEN54	94	63.984	ENSGALG00000047163	TSEN54	96	63.984	Gallus_gallus
ENSCPBG00000028071	TSEN54	98	47.115	ENSGAFG00000005111	tsen54	97	47.692	Gambusia_affinis
ENSCPBG00000028071	TSEN54	97	45.315	ENSGACG00000014987	tsen54	99	45.507	Gasterosteus_aculeatus
ENSCPBG00000028071	TSEN54	100	94.886	ENSGAGG00000006825	TSEN54	99	94.886	Gopherus_agassizii
ENSCPBG00000028071	TSEN54	97	55.642	ENSGGOG00000009417	TSEN54	99	56.530	Gorilla_gorilla
ENSCPBG00000028071	TSEN54	89	45.963	ENSHBUG00000018296	tsen54	89	45.957	Haplochromis_burtoni
ENSCPBG00000028071	TSEN54	99	55.660	ENSHGLG00000007979	TSEN54	99	55.660	Heterocephalus_glaber_female
ENSCPBG00000028071	TSEN54	99	54.717	ENSHGLG00100005497	TSEN54	99	54.717	Heterocephalus_glaber_male
ENSCPBG00000028071	TSEN54	82	43.919	ENSHCOG00000007481	tsen54	99	43.694	Hippocampus_comes
ENSCPBG00000028071	TSEN54	98	42.337	ENSIPUG00000000590	tsen54	96	43.295	Ictalurus_punctatus
ENSCPBG00000028071	TSEN54	99	54.307	ENSSTOG00000012883	TSEN54	99	54.307	Ictidomys_tridecemlineatus
ENSCPBG00000028071	TSEN54	99	56.238	ENSJJAG00000007365	Tsen54	99	56.238	Jaculus_jaculus
ENSCPBG00000028071	TSEN54	98	47.538	ENSKMAG00000006944	tsen54	97	47.529	Kryptolebias_marmoratus
ENSCPBG00000028071	TSEN54	98	45.698	ENSLBEG00000004199	tsen54	97	45.698	Labrus_bergylta
ENSCPBG00000028071	TSEN54	98	48.381	ENSLACG00000009497	TSEN54	100	48.381	Latimeria_chalumnae
ENSCPBG00000028071	TSEN54	98	46.947	ENSLOCG00000011191	tsen54	97	47.601	Lepisosteus_oculatus
ENSCPBG00000028071	TSEN54	93	55.578	ENSLAFG00000011655	TSEN54	92	55.422	Loxodonta_africana
ENSCPBG00000028071	TSEN54	99	54.511	ENSMFAG00000000712	TSEN54	99	55.367	Macaca_fascicularis
ENSCPBG00000028071	TSEN54	99	54.323	ENSMNEG00000029199	TSEN54	99	55.179	Macaca_nemestrina
ENSCPBG00000028071	TSEN54	87	52.620	ENSMLEG00000044168	TSEN54	88	53.611	Mandrillus_leucophaeus
ENSCPBG00000028071	TSEN54	98	46.628	ENSMAMG00000019773	tsen54	97	46.628	Mastacembelus_armatus
ENSCPBG00000028071	TSEN54	98	47.081	ENSMZEG00005000884	tsen54	97	47.104	Maylandia_zebra
ENSCPBG00000028071	TSEN54	97	63.830	ENSMGAG00000009556	TSEN54	97	63.830	Meleagris_gallopavo
ENSCPBG00000028071	TSEN54	99	55.597	ENSMAUG00000016838	Tsen54	99	55.597	Mesocricetus_auratus
ENSCPBG00000028071	TSEN54	99	56.075	ENSMICG00000044012	TSEN54	99	56.262	Microcebus_murinus
ENSCPBG00000028071	TSEN54	99	55.159	ENSMOCG00000021585	Tsen54	99	55.159	Microtus_ochrogaster
ENSCPBG00000028071	TSEN54	97	45.261	ENSMMOG00000020189	tsen54	99	46.525	Mola_mola
ENSCPBG00000028071	TSEN54	98	56.357	ENSMODG00000007438	TSEN54	98	56.215	Monodelphis_domestica
ENSCPBG00000028071	TSEN54	98	47.290	ENSMALG00000020573	tsen54	97	47.575	Monopterus_albus
ENSCPBG00000028071	TSEN54	99	55.037	MGP_CAROLIEiJ_G0017417	Tsen54	99	55.037	Mus_caroli
ENSCPBG00000028071	TSEN54	99	55.410	ENSMUSG00000020781	Tsen54	99	55.410	Mus_musculus
ENSCPBG00000028071	TSEN54	99	55.784	MGP_PahariEiJ_G0018547	Tsen54	99	55.784	Mus_pahari
ENSCPBG00000028071	TSEN54	99	55.224	MGP_SPRETEiJ_G0018262	Tsen54	99	55.576	Mus_spretus
ENSCPBG00000028071	TSEN54	99	54.511	ENSMPUG00000013870	TSEN54	99	55.075	Mustela_putorius_furo
ENSCPBG00000028071	TSEN54	99	55.535	ENSMLUG00000015298	TSEN54	99	55.827	Myotis_lucifugus
ENSCPBG00000028071	TSEN54	99	55.660	ENSNGAG00000015673	Tsen54	99	55.660	Nannospalax_galili
ENSCPBG00000028071	TSEN54	89	53.361	ENSMEUG00000011908	TSEN54	99	53.361	Notamacropus_eugenii
ENSCPBG00000028071	TSEN54	99	50.654	ENSOPRG00000012513	TSEN54	99	50.654	Ochotona_princeps
ENSCPBG00000028071	TSEN54	98	47.490	ENSONIG00000009543	tsen54	97	47.297	Oreochromis_niloticus
ENSCPBG00000028071	TSEN54	99	50.000	ENSOCUG00000009875	TSEN54	99	51.273	Oryctolagus_cuniculus
ENSCPBG00000028071	TSEN54	98	46.408	ENSORLG00000000852	tsen54	97	46.408	Oryzias_latipes
ENSCPBG00000028071	TSEN54	98	46.154	ENSORLG00020018221	tsen54	97	46.796	Oryzias_latipes_hni
ENSCPBG00000028071	TSEN54	98	46.346	ENSORLG00015009413	tsen54	98	46.743	Oryzias_latipes_hsok
ENSCPBG00000028071	TSEN54	98	46.990	ENSOMEG00000014402	tsen54	94	46.990	Oryzias_melastigma
ENSCPBG00000028071	TSEN54	99	53.008	ENSOGAG00000001442	TSEN54	99	53.008	Otolemur_garnettii
ENSCPBG00000028071	TSEN54	87	53.275	ENSOARG00000010361	TSEN54	99	54.031	Ovis_aries
ENSCPBG00000028071	TSEN54	95	56.600	ENSPPAG00000043519	TSEN54	99	56.800	Pan_paniscus
ENSCPBG00000028071	TSEN54	99	55.910	ENSPPRG00000009162	TSEN54	99	56.098	Panthera_pardus
ENSCPBG00000028071	TSEN54	87	53.478	ENSPTIG00000019312	TSEN54	96	53.478	Panthera_tigris_altaica
ENSCPBG00000028071	TSEN54	99	55.451	ENSPTRG00000009646	TSEN54	99	56.309	Pan_troglodytes
ENSCPBG00000028071	TSEN54	99	54.120	ENSPANG00000020133	TSEN54	99	54.972	Papio_anubis
ENSCPBG00000028071	TSEN54	97	45.803	ENSPKIG00000023018	tsen54	99	47.477	Paramormyrops_kingsleyae
ENSCPBG00000028071	TSEN54	82	88.140	ENSPSIG00000012807	TSEN54	100	88.140	Pelodiscus_sinensis
ENSCPBG00000028071	TSEN54	71	58.915	ENSPMGG00000019578	tsen54	81	58.915	Periophthalmus_magnuspinnatus
ENSCPBG00000028071	TSEN54	99	55.639	ENSPEMG00000014857	Tsen54	99	55.639	Peromyscus_maniculatus_bairdii
ENSCPBG00000028071	TSEN54	98	48.560	ENSPFOG00000022740	tsen54	97	49.136	Poecilia_formosa
ENSCPBG00000028071	TSEN54	98	48.263	ENSPLAG00000014847	tsen54	97	48.842	Poecilia_latipinna
ENSCPBG00000028071	TSEN54	98	47.683	ENSPMEG00000022876	tsen54	97	48.263	Poecilia_mexicana
ENSCPBG00000028071	TSEN54	98	47.481	ENSPREG00000013090	tsen54	97	48.062	Poecilia_reticulata
ENSCPBG00000028071	TSEN54	92	53.719	ENSPPYG00000008629	TSEN54	99	54.752	Pongo_abelii
ENSCPBG00000028071	TSEN54	94	49.899	ENSPCAG00000002093	TSEN54	97	49.899	Procavia_capensis
ENSCPBG00000028071	TSEN54	99	56.955	ENSPCOG00000027880	TSEN54	99	56.955	Propithecus_coquereli
ENSCPBG00000028071	TSEN54	99	56.215	ENSPVAG00000008446	TSEN54	99	56.215	Pteropus_vampyrus
ENSCPBG00000028071	TSEN54	94	48.134	ENSPNYG00000010217	tsen54	99	47.573	Pundamilia_nyererei
ENSCPBG00000028071	TSEN54	98	47.467	ENSPNAG00000003770	tsen54	97	47.719	Pygocentrus_nattereri
ENSCPBG00000028071	TSEN54	99	55.243	ENSRNOG00000004598	Tsen54	99	55.243	Rattus_norvegicus
ENSCPBG00000028071	TSEN54	99	54.991	ENSRBIG00000043040	TSEN54	99	55.179	Rhinopithecus_bieti
ENSCPBG00000028071	TSEN54	99	55.172	ENSRROG00000030797	TSEN54	98	55.364	Rhinopithecus_roxellana
ENSCPBG00000028071	TSEN54	99	51.679	ENSSBOG00000013543	TSEN54	99	53.084	Saimiri_boliviensis_boliviensis
ENSCPBG00000028071	TSEN54	98	56.333	ENSSHAG00000018127	TSEN54	96	56.333	Sarcophilus_harrisii
ENSCPBG00000028071	TSEN54	81	46.528	ENSSFOG00015004093	tsen54	99	46.047	Scleropages_formosus
ENSCPBG00000028071	TSEN54	98	45.873	ENSSMAG00000012449	tsen54	100	45.591	Scophthalmus_maximus
ENSCPBG00000028071	TSEN54	98	47.114	ENSSDUG00000021506	tsen54	97	48.170	Seriola_dumerili
ENSCPBG00000028071	TSEN54	98	47.977	ENSSLDG00000016303	tsen54	97	47.977	Seriola_lalandi_dorsalis
ENSCPBG00000028071	TSEN54	81	66.279	ENSSPUG00000008988	TSEN54	97	65.977	Sphenodon_punctatus
ENSCPBG00000028071	TSEN54	82	44.240	ENSSPAG00000008047	tsen54	99	44.240	Stegastes_partitus
ENSCPBG00000028071	TSEN54	94	49.497	ENSSPAG00000008098	-	99	49.497	Stegastes_partitus
ENSCPBG00000028071	TSEN54	99	56.015	ENSSSCG00000036852	TSEN54	99	56.203	Sus_scrofa
ENSCPBG00000028071	TSEN54	87	69.737	ENSTGUG00000008548	TSEN54	99	69.737	Taeniopygia_guttata
ENSCPBG00000028071	TSEN54	98	46.214	ENSTRUG00000004230	tsen54	97	46.214	Takifugu_rubripes
ENSCPBG00000028071	TSEN54	87	55.150	ENSTTRG00000015828	TSEN54	99	55.365	Tursiops_truncatus
ENSCPBG00000028071	TSEN54	81	51.508	ENSUAMG00000010045	TSEN54	99	51.276	Ursus_americanus
ENSCPBG00000028071	TSEN54	84	52.242	ENSUMAG00000008979	TSEN54	99	52.242	Ursus_maritimus
ENSCPBG00000028071	TSEN54	97	56.615	ENSVVUG00000011411	TSEN54	97	56.615	Vulpes_vulpes
ENSCPBG00000028071	TSEN54	98	49.718	ENSXETG00000012532	tsen54	99	68.333	Xenopus_tropicalis
ENSCPBG00000028071	TSEN54	75	62.874	ENSXCOG00000018245	tsen54	87	62.874	Xiphophorus_couchianus
ENSCPBG00000028071	TSEN54	98	47.610	ENSXMAG00000018818	tsen54	97	48.184	Xiphophorus_maculatus