EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000028299 (Gene tree)
Gene ID: 101934194
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 11190 bases
Position: chrKK088227.1:4307099-4318288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000041241	PRP38	PF03371.15	2.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000048332	-	1638	-	ENSCPBP00000041241	545 (aa)	XP_005285533	UPI00038906EF

Gene Model

Click here to download ENSCPBG00000028299's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000028299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000028299	-	100	86.654	ENSBTAG00000047874	PRPF38B	100	86.545	Bos_taurus
ENSCPBG00000028299	-	100	71.091	ENSCAFG00020010992	-	100	75.993	Canis_lupus_dingo
ENSCPBG00000028299	-	100	86.654	ENSCHIG00000024357	-	100	86.545	Capra_hircus
ENSCPBG00000028299	-	79	86.311	ENSCAPG00000009606	-	98	87.050	Cavia_aperea
ENSCPBG00000028299	-	100	85.505	ENSCPOG00000039545	-	100	85.246	Cavia_porcellus
ENSCPBG00000028299	-	100	85.636	ENSCLAG00000005801	-	100	85.560	Chinchilla_lanigera
ENSCPBG00000028299	-	64	78.187	ENSCHOG00000008972	-	93	77.273	Choloepus_hoffmanni
ENSCPBG00000028299	-	82	83.664	ENSETEG00000014690	-	100	84.141	Echinops_telfairi
ENSCPBG00000028299	-	83	88.791	ENSFALG00000002673	-	89	90.110	Ficedula_albicollis
ENSCPBG00000028299	-	100	92.532	ENSGALG00000001972	-	100	92.532	Gallus_gallus
ENSCPBG00000028299	-	100	97.982	ENSGAGG00000001563	-	100	97.982	Gopherus_agassizii
ENSCPBG00000028299	-	100	86.885	ENSHGLG00000016583	PRPF38B	100	86.885	Heterocephalus_glaber_female
ENSCPBG00000028299	-	100	86.703	ENSHGLG00100015525	-	100	86.703	Heterocephalus_glaber_male
ENSCPBG00000028299	-	93	76.136	ENSLACG00000015511	-	96	74.436	Latimeria_chalumnae
ENSCPBG00000028299	-	60	89.362	ENSMOCG00000020285	-	100	83.150	Microtus_ochrogaster
ENSCPBG00000028299	-	56	93.811	ENSMODG00000002350	-	100	87.203	Monodelphis_domestica
ENSCPBG00000028299	-	80	86.253	ENSOPRG00000013543	-	81	86.523	Ochotona_princeps
ENSCPBG00000028299	-	94	74.312	ENSOANG00000007343	-	91	88.851	Ornithorhynchus_anatinus
ENSCPBG00000028299	-	83	64.211	ENSORLG00000015621	-	91	89.375	Oryzias_latipes
ENSCPBG00000028299	-	83	65.245	ENSORLG00020016276	-	91	89.375	Oryzias_latipes_hni
ENSCPBG00000028299	-	83	65.032	ENSORLG00015016270	-	77	89.375	Oryzias_latipes_hsok
ENSCPBG00000028299	-	83	64.842	ENSOMEG00000022050	-	94	88.889	Oryzias_melastigma
ENSCPBG00000028299	-	100	85.246	ENSOGAG00000027048	-	100	84.838	Otolemur_garnettii
ENSCPBG00000028299	-	100	85.192	ENSOARG00000018899	-	100	85.740	Ovis_aries
ENSCPBG00000028299	-	99	62.118	ENSPKIG00000017291	-	71	92.823	Paramormyrops_kingsleyae
ENSCPBG00000028299	-	97	60.628	ENSPKIG00000004815	-	97	61.682	Paramormyrops_kingsleyae
ENSCPBG00000028299	-	100	95.963	ENSPSIG00000016569	-	100	95.963	Pelodiscus_sinensis
ENSCPBG00000028299	-	83	64.331	ENSPFOG00000004025	-	84	90.000	Poecilia_formosa
ENSCPBG00000028299	-	83	63.482	ENSPREG00000015599	-	86	90.000	Poecilia_reticulata
ENSCPBG00000028299	-	100	82.878	ENSRNOG00000020438	Prpf38b	100	82.696	Rattus_norvegicus
ENSCPBG00000028299	-	93	62.050	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSCPBG00000028299	-	83	64.742	ENSSLDG00000023487	-	86	90.000	Seriola_lalandi_dorsalis
ENSCPBG00000028299	-	100	89.636	ENSSPUG00000017742	-	100	90.364	Sphenodon_punctatus
ENSCPBG00000028299	-	77	62.232	ENSTRUG00000011765	-	50	83.621	Takifugu_rubripes
ENSCPBG00000028299	-	77	63.657	ENSTNIG00000015299	-	55	85.973	Tetraodon_nigroviridis
ENSCPBG00000028299	-	93	84.736	ENSTBEG00000007504	-	100	84.932	Tupaia_belangeri
ENSCPBG00000028299	-	100	87.020	ENSTTRG00000006479	-	100	86.909	Tursiops_truncatus
ENSCPBG00000028299	-	93	82.643	ENSVPAG00000005541	-	94	83.008	Vicugna_pacos
ENSCPBG00000028299	-	94	74.563	ENSXETG00000005260	prpf38b	100	67.273	Xenopus_tropicalis