EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000028311 (Gene tree)
Gene ID: 101953862
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 20141 bases
Position: chrKK088227.1:6806222-6826362
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000041262	RRM_1	PF00076.22	6.2e-18	1	2
ENSCPBP00000041262	RRM_1	PF00076.22	6.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000048353	RNPC3-201	1781	-	ENSCPBP00000041262	516 (aa)	XP_008162550	UPI000388C6C2

Gene Model

Click here to download ENSCPBG00000028311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000028311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000028311	RNPC3	95	70.423	ENSG00000185946	RNPC3	100	67.857	Homo_sapiens
ENSCPBG00000028311	RNPC3	96	57.715	ENSAPOG00000017371	rnpc3	98	55.734	Acanthochromis_polyacanthus
ENSCPBG00000028311	RNPC3	98	69.922	ENSAMEG00000001694	RNPC3	98	69.498	Ailuropoda_melanoleuca
ENSCPBG00000028311	RNPC3	95	55.578	ENSACIG00000021043	rnpc3	97	55.378	Amphilophus_citrinellus
ENSCPBG00000028311	RNPC3	95	57.884	ENSAOCG00000014052	rnpc3	97	55.385	Amphiprion_ocellaris
ENSCPBG00000028311	RNPC3	96	57.312	ENSAPEG00000008739	rnpc3	96	56.016	Amphiprion_percula
ENSCPBG00000028311	RNPC3	95	56.238	ENSATEG00000021263	rnpc3	97	56.832	Anabas_testudineus
ENSCPBG00000028311	RNPC3	88	82.522	ENSAPLG00000015605	RNPC3	100	81.637	Anas_platyrhynchos
ENSCPBG00000028311	RNPC3	99	76.228	ENSACAG00000002029	RNPC3	99	76.311	Anolis_carolinensis
ENSCPBG00000028311	RNPC3	95	69.618	ENSANAG00000019950	RNPC3	95	69.618	Aotus_nancymaae
ENSCPBG00000028311	RNPC3	95	57.347	ENSACLG00000014702	rnpc3	96	57.143	Astatotilapia_calliptera
ENSCPBG00000028311	RNPC3	96	55.823	ENSAMXG00000033372	rnpc3	97	56.827	Astyanax_mexicanus
ENSCPBG00000028311	RNPC3	95	71.687	ENSBTAG00000019091	RNPC3	95	71.687	Bos_taurus
ENSCPBG00000028311	RNPC3	95	69.416	ENSCJAG00000035686	RNPC3	95	69.416	Callithrix_jacchus
ENSCPBG00000028311	RNPC3	99	69.246	ENSCAFG00000019972	RNPC3	98	69.246	Canis_familiaris
ENSCPBG00000028311	RNPC3	99	69.439	ENSCAFG00020011300	RNPC3	98	69.439	Canis_lupus_dingo
ENSCPBG00000028311	RNPC3	95	71.687	ENSCHIG00000020361	RNPC3	95	71.486	Capra_hircus
ENSCPBG00000028311	RNPC3	99	67.692	ENSTSYG00000030256	RNPC3	99	67.500	Carlito_syrichta
ENSCPBG00000028311	RNPC3	84	62.415	ENSCAPG00000013600	RNPC3	97	59.152	Cavia_aperea
ENSCPBG00000028311	RNPC3	95	70.221	ENSCPOG00000031638	RNPC3	95	70.020	Cavia_porcellus
ENSCPBG00000028311	RNPC3	95	69.618	ENSCCAG00000024301	RNPC3	95	69.618	Cebus_capucinus
ENSCPBG00000028311	RNPC3	95	70.363	ENSCATG00000002086	RNPC3	95	70.565	Cercocebus_atys
ENSCPBG00000028311	RNPC3	95	53.659	ENSCATG00000035930	-	95	53.455	Cercocebus_atys
ENSCPBG00000028311	RNPC3	97	68.898	ENSCLAG00000005169	RNPC3	97	68.898	Chinchilla_lanigera
ENSCPBG00000028311	RNPC3	95	70.363	ENSCSAG00000001519	RNPC3	95	70.565	Chlorocebus_sabaeus
ENSCPBG00000028311	RNPC3	93	37.838	ENSCSAVG00000002800	-	100	38.046	Ciona_savignyi
ENSCPBG00000028311	RNPC3	95	69.960	ENSCANG00000031444	RNPC3	95	70.161	Colobus_angolensis_palliatus
ENSCPBG00000028311	RNPC3	97	68.898	ENSCGRG00001019276	Rnpc3	100	67.885	Cricetulus_griseus_chok1gshd
ENSCPBG00000028311	RNPC3	87	69.079	ENSCGRG00000000053	Rnpc3	100	69.079	Cricetulus_griseus_crigri
ENSCPBG00000028311	RNPC3	96	56.942	ENSCSEG00000013475	rnpc3	97	55.758	Cynoglossus_semilaevis
ENSCPBG00000028311	RNPC3	95	55.819	ENSCVAG00000002645	rnpc3	97	55.248	Cyprinodon_variegatus
ENSCPBG00000028311	RNPC3	95	56.713	ENSDARG00000011247	rnpc3	89	66.272	Danio_rerio
ENSCPBG00000028311	RNPC3	99	68.462	ENSDNOG00000047498	-	99	68.462	Dasypus_novemcinctus
ENSCPBG00000028311	RNPC3	99	68.462	ENSDNOG00000044555	-	99	68.462	Dasypus_novemcinctus
ENSCPBG00000028311	RNPC3	96	70.766	ENSDORG00000027343	Rnpc3	96	70.766	Dipodomys_ordii
ENSCPBG00000028311	RNPC3	95	48.915	ENSEBUG00000002068	rnpc3	97	47.255	Eptatretus_burgeri
ENSCPBG00000028311	RNPC3	99	68.762	ENSEASG00005015957	RNPC3	97	69.804	Equus_asinus_asinus
ENSCPBG00000028311	RNPC3	99	68.571	ENSECAG00000021148	RNPC3	97	69.608	Equus_caballus
ENSCPBG00000028311	RNPC3	95	54.086	ENSELUG00000002264	rnpc3	97	54.669	Esox_lucius
ENSCPBG00000028311	RNPC3	95	70.825	ENSFCAG00000024312	RNPC3	95	70.825	Felis_catus
ENSCPBG00000028311	RNPC3	88	81.637	ENSFALG00000002580	RNPC3	100	80.310	Ficedula_albicollis
ENSCPBG00000028311	RNPC3	95	71.831	ENSFDAG00000019948	RNPC3	96	71.630	Fukomys_damarensis
ENSCPBG00000028311	RNPC3	95	52.352	ENSFHEG00000020647	rnpc3	96	51.738	Fundulus_heteroclitus
ENSCPBG00000028311	RNPC3	95	54.747	ENSGMOG00000019213	rnpc3	96	54.564	Gadus_morhua
ENSCPBG00000028311	RNPC3	99	81.783	ENSGALG00000005162	RNPC3	94	80.385	Gallus_gallus
ENSCPBG00000028311	RNPC3	95	55.888	ENSGAFG00000017236	rnpc3	97	55.489	Gambusia_affinis
ENSCPBG00000028311	RNPC3	95	56.680	ENSGACG00000002048	rnpc3	97	55.754	Gasterosteus_aculeatus
ENSCPBG00000028311	RNPC3	100	96.923	ENSGAGG00000008438	RNPC3	100	96.923	Gopherus_agassizii
ENSCPBG00000028311	RNPC3	95	59.305	ENSGGOG00000026201	-	94	59.305	Gorilla_gorilla
ENSCPBG00000028311	RNPC3	78	69.231	ENSHBUG00000015966	rnpc3	82	69.231	Haplochromis_burtoni
ENSCPBG00000028311	RNPC3	95	70.825	ENSHGLG00000001708	RNPC3	95	70.825	Heterocephalus_glaber_female
ENSCPBG00000028311	RNPC3	95	70.825	ENSHGLG00100003005	RNPC3	95	70.825	Heterocephalus_glaber_male
ENSCPBG00000028311	RNPC3	96	55.711	ENSHCOG00000017135	rnpc3	98	54.309	Hippocampus_comes
ENSCPBG00000028311	RNPC3	94	58.896	ENSIPUG00000002916	rnpc3	96	57.873	Ictalurus_punctatus
ENSCPBG00000028311	RNPC3	95	70.221	ENSSTOG00000025020	RNPC3	95	70.020	Ictidomys_tridecemlineatus
ENSCPBG00000028311	RNPC3	95	68.826	ENSJJAG00000010203	Rnpc3	100	66.538	Jaculus_jaculus
ENSCPBG00000028311	RNPC3	95	56.478	ENSKMAG00000017358	rnpc3	97	55.847	Kryptolebias_marmoratus
ENSCPBG00000028311	RNPC3	95	58.317	ENSLBEG00000024901	rnpc3	95	57.916	Labrus_bergylta
ENSCPBG00000028311	RNPC3	95	65.859	ENSLACG00000005720	RNPC3	91	63.636	Latimeria_chalumnae
ENSCPBG00000028311	RNPC3	95	61.167	ENSLOCG00000007986	rnpc3	97	59.073	Lepisosteus_oculatus
ENSCPBG00000028311	RNPC3	95	70.221	ENSLAFG00000032342	RNPC3	98	68.472	Loxodonta_africana
ENSCPBG00000028311	RNPC3	95	70.565	ENSMFAG00000002004	RNPC3	95	70.766	Macaca_fascicularis
ENSCPBG00000028311	RNPC3	95	52.429	ENSMFAG00000002917	-	95	52.024	Macaca_fascicularis
ENSCPBG00000028311	RNPC3	78	67.143	ENSMMUG00000002098	-	86	66.190	Macaca_mulatta
ENSCPBG00000028311	RNPC3	95	70.363	ENSMMUG00000018039	RNPC3	95	70.565	Macaca_mulatta
ENSCPBG00000028311	RNPC3	77	57.071	ENSMNEG00000029209	-	81	60.053	Macaca_nemestrina
ENSCPBG00000028311	RNPC3	95	66.532	ENSMNEG00000033950	RNPC3	95	66.734	Macaca_nemestrina
ENSCPBG00000028311	RNPC3	95	52.811	ENSMLEG00000034644	-	96	53.693	Mandrillus_leucophaeus
ENSCPBG00000028311	RNPC3	95	70.363	ENSMLEG00000033628	RNPC3	95	70.565	Mandrillus_leucophaeus
ENSCPBG00000028311	RNPC3	95	53.094	ENSMAMG00000007496	rnpc3	97	52.191	Mastacembelus_armatus
ENSCPBG00000028311	RNPC3	95	56.607	ENSMZEG00005020233	rnpc3	97	56.410	Maylandia_zebra
ENSCPBG00000028311	RNPC3	88	82.314	ENSMGAG00000006381	RNPC3	100	81.659	Meleagris_gallopavo
ENSCPBG00000028311	RNPC3	95	70.624	ENSMAUG00000001358	Rnpc3	100	68.269	Mesocricetus_auratus
ENSCPBG00000028311	RNPC3	99	68.774	ENSMICG00000029591	RNPC3	99	68.774	Microcebus_murinus
ENSCPBG00000028311	RNPC3	95	70.020	ENSMOCG00000013423	Rnpc3	97	68.898	Microtus_ochrogaster
ENSCPBG00000028311	RNPC3	95	53.455	ENSMMOG00000005309	rnpc3	96	53.783	Mola_mola
ENSCPBG00000028311	RNPC3	96	74.239	ENSMODG00000002946	RNPC3	96	73.834	Monodelphis_domestica
ENSCPBG00000028311	RNPC3	95	54.348	ENSMALG00000015471	rnpc3	97	52.381	Monopterus_albus
ENSCPBG00000028311	RNPC3	99	67.437	MGP_CAROLIEiJ_G0025555	Rnpc3	99	69.034	Mus_caroli
ENSCPBG00000028311	RNPC3	99	67.630	ENSMUSG00000027981	Rnpc3	99	69.313	Mus_musculus
ENSCPBG00000028311	RNPC3	99	67.437	MGP_PahariEiJ_G0027001	Rnpc3	99	68.442	Mus_pahari
ENSCPBG00000028311	RNPC3	99	67.823	MGP_SPRETEiJ_G0026505	Rnpc3	99	68.442	Mus_spretus
ENSCPBG00000028311	RNPC3	99	69.246	ENSMPUG00000007349	RNPC3	98	69.246	Mustela_putorius_furo
ENSCPBG00000028311	RNPC3	99	68.582	ENSMLUG00000028743	RNPC3	99	68.774	Myotis_lucifugus
ENSCPBG00000028311	RNPC3	97	69.882	ENSNGAG00000010939	Rnpc3	98	69.882	Nannospalax_galili
ENSCPBG00000028311	RNPC3	95	57.143	ENSNBRG00000012196	rnpc3	93	56.939	Neolamprologus_brichardi
ENSCPBG00000028311	RNPC3	95	70.423	ENSNLEG00000012013	RNPC3	95	70.624	Nomascus_leucogenys
ENSCPBG00000028311	RNPC3	95	70.221	ENSODEG00000007612	RNPC3	95	69.819	Octodon_degus
ENSCPBG00000028311	RNPC3	95	59.073	ENSONIG00000004770	rnpc3	99	57.490	Oreochromis_niloticus
ENSCPBG00000028311	RNPC3	90	74.894	ENSOANG00000008220	RNPC3	100	73.830	Ornithorhynchus_anatinus
ENSCPBG00000028311	RNPC3	95	70.423	ENSOCUG00000004016	RNPC3	96	70.020	Oryctolagus_cuniculus
ENSCPBG00000028311	RNPC3	95	56.008	ENSORLG00000005694	rnpc3	97	55.804	Oryzias_latipes
ENSCPBG00000028311	RNPC3	95	56.415	ENSORLG00020005513	rnpc3	97	56.212	Oryzias_latipes_hni
ENSCPBG00000028311	RNPC3	95	56.212	ENSORLG00015002179	rnpc3	97	56.008	Oryzias_latipes_hsok
ENSCPBG00000028311	RNPC3	96	56.162	ENSOMEG00000017737	rnpc3	98	56.364	Oryzias_melastigma
ENSCPBG00000028311	RNPC3	95	71.169	ENSOGAG00000026182	RNPC3	99	69.098	Otolemur_garnettii
ENSCPBG00000028311	RNPC3	95	71.687	ENSOARG00000018719	RNPC3	95	71.486	Ovis_aries
ENSCPBG00000028311	RNPC3	95	59.918	ENSPPAG00000030278	-	97	58.788	Pan_paniscus
ENSCPBG00000028311	RNPC3	95	70.080	ENSPPAG00000037459	RNPC3	95	70.683	Pan_paniscus
ENSCPBG00000028311	RNPC3	95	71.026	ENSPPRG00000020246	RNPC3	95	71.026	Panthera_pardus
ENSCPBG00000028311	RNPC3	95	71.026	ENSPTIG00000009887	RNPC3	97	71.026	Panthera_tigris_altaica
ENSCPBG00000028311	RNPC3	95	70.221	ENSPTRG00000033902	RNPC3	95	70.423	Pan_troglodytes
ENSCPBG00000028311	RNPC3	94	59.053	ENSPTRG00000044227	-	97	57.778	Pan_troglodytes
ENSCPBG00000028311	RNPC3	95	56.883	ENSPANG00000029957	-	97	55.263	Papio_anubis
ENSCPBG00000028311	RNPC3	95	70.363	ENSPANG00000012137	RNPC3	95	70.565	Papio_anubis
ENSCPBG00000028311	RNPC3	98	57.225	ENSPKIG00000008828	rnpc3	99	54.721	Paramormyrops_kingsleyae
ENSCPBG00000028311	RNPC3	63	93.293	ENSPSIG00000007396	RNPC3	100	93.293	Pelodiscus_sinensis
ENSCPBG00000028311	RNPC3	95	51.600	ENSPMGG00000011742	rnpc3	97	51.600	Periophthalmus_magnuspinnatus
ENSCPBG00000028311	RNPC3	88	68.113	ENSPEMG00000020112	Rnpc3	100	68.860	Peromyscus_maniculatus_bairdii
ENSCPBG00000028311	RNPC3	95	47.104	ENSPMAG00000003778	rnpc3	97	47.184	Petromyzon_marinus
ENSCPBG00000028311	RNPC3	96	73.834	ENSPCIG00000004415	-	96	73.428	Phascolarctos_cinereus
ENSCPBG00000028311	RNPC3	95	55.578	ENSPFOG00000009895	rnpc3	96	55.777	Poecilia_formosa
ENSCPBG00000028311	RNPC3	95	55.976	ENSPLAG00000012023	rnpc3	96	56.175	Poecilia_latipinna
ENSCPBG00000028311	RNPC3	95	55.777	ENSPMEG00000003663	rnpc3	96	55.976	Poecilia_mexicana
ENSCPBG00000028311	RNPC3	95	55.578	ENSPREG00000010206	rnpc3	97	55.711	Poecilia_reticulata
ENSCPBG00000028311	RNPC3	79	64.337	ENSPPYG00000001102	RNPC3	94	64.578	Pongo_abelii
ENSCPBG00000028311	RNPC3	95	57.143	ENSPNYG00000020603	rnpc3	96	57.143	Pundamilia_nyererei
ENSCPBG00000028311	RNPC3	95	53.479	ENSPNAG00000000524	rnpc3	89	54.234	Pygocentrus_nattereri
ENSCPBG00000028311	RNPC3	99	66.923	ENSRNOG00000017310	Rnpc3	100	66.923	Rattus_norvegicus
ENSCPBG00000028311	RNPC3	95	65.191	ENSRBIG00000043897	RNPC3	95	65.392	Rhinopithecus_bieti
ENSCPBG00000028311	RNPC3	95	70.363	ENSRROG00000032334	RNPC3	95	70.565	Rhinopithecus_roxellana
ENSCPBG00000028311	RNPC3	97	68.836	ENSSBOG00000024473	RNPC3	96	69.461	Saimiri_boliviensis_boliviensis
ENSCPBG00000028311	RNPC3	96	73.092	ENSSHAG00000011859	RNPC3	96	72.691	Sarcophilus_harrisii
ENSCPBG00000028311	RNPC3	95	60.081	ENSSFOG00015013055	rnpc3	99	59.674	Scleropages_formosus
ENSCPBG00000028311	RNPC3	95	55.952	ENSSMAG00000020346	rnpc3	97	55.268	Scophthalmus_maximus
ENSCPBG00000028311	RNPC3	95	56.634	ENSSDUG00000006600	rnpc3	97	56.548	Seriola_dumerili
ENSCPBG00000028311	RNPC3	95	56.349	ENSSLDG00000007979	rnpc3	97	56.746	Seriola_lalandi_dorsalis
ENSCPBG00000028311	RNPC3	98	81.262	ENSSPUG00000008539	-	97	80.868	Sphenodon_punctatus
ENSCPBG00000028311	RNPC3	96	75.051	ENSSPUG00000003872	-	92	74.442	Sphenodon_punctatus
ENSCPBG00000028311	RNPC3	95	56.823	ENSSPAG00000005633	rnpc3	97	56.619	Stegastes_partitus
ENSCPBG00000028311	RNPC3	99	68.665	ENSSSCG00000037254	RNPC3	98	68.859	Sus_scrofa
ENSCPBG00000028311	RNPC3	88	81.195	ENSTGUG00000004795	-	100	78.761	Taeniopygia_guttata
ENSCPBG00000028311	RNPC3	95	56.539	ENSTNIG00000018963	rnpc3	97	55.466	Tetraodon_nigroviridis
ENSCPBG00000028311	RNPC3	98	70.450	ENSUMAG00000007775	RNPC3	99	70.450	Ursus_maritimus
ENSCPBG00000028311	RNPC3	99	69.439	ENSVVUG00000000331	RNPC3	98	69.439	Vulpes_vulpes
ENSCPBG00000028311	RNPC3	95	50.988	ENSXETG00000025027	rnpc3	97	49.225	Xenopus_tropicalis
ENSCPBG00000028311	RNPC3	95	55.888	ENSXCOG00000005013	rnpc3	97	55.689	Xiphophorus_couchianus
ENSCPBG00000028311	RNPC3	95	55.888	ENSXMAG00000006495	rnpc3	97	55.489	Xiphophorus_maculatus