EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000028375 (Gene tree)
Gene ID: 101948992
Gene Symbol: RAB12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 38984 bases
Position: chrKK088230.1:707701-746684
Accession: 31332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000041361	MMR_HSR1	PF01926.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000048489	RAB12-202	1937	-	ENSCPBP00000041362	277 (aa)	-	-
ENSCPBT00000048488	RAB12-201	1998	XM_005282644	ENSCPBP00000041361	245 (aa)	XP_005282701	UPI0003891551

Gene Model

Click here to download ENSCPBG00000028375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000028375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000028375	RAB12	76	36.316	ENSCPBG00000014343	RAB7A	88	36.612
ENSCPBG00000028375	RAB12	64	41.104	ENSCPBG00000012042	RAB33A	64	41.104
ENSCPBG00000028375	RAB12	80	37.000	ENSCPBG00000027605	RAB33B	76	37.572
ENSCPBG00000028375	RAB12	83	34.975	ENSCPBG00000022559	RAB5A	78	37.500
ENSCPBG00000028375	RAB12	85	36.321	ENSCPBG00000009941	RAB14	80	40.462
ENSCPBG00000028375	RAB12	63	36.538	ENSCPBG00000022640	RAB23	69	36.310
ENSCPBG00000028375	RAB12	69	46.154	ENSCPBG00000027619	-	83	46.154
ENSCPBG00000028375	RAB12	71	48.000	ENSCPBG00000022446	RAB1B	84	48.521
ENSCPBG00000028375	RAB12	70	30.286	ENSCPBG00000028244	RERG	85	30.286
ENSCPBG00000028375	RAB12	73	32.787	ENSCPBG00000020275	RAB34	69	32.787
ENSCPBG00000028375	RAB12	64	38.125	ENSCPBG00000002289	RAB36	51	38.125
ENSCPBG00000028375	RAB12	65	40.252	ENSCPBG00000021406	RAB6B	76	41.026
ENSCPBG00000028375	RAB12	62	31.818	ENSCPBG00000009289	-	86	32.317
ENSCPBG00000028375	RAB12	86	31.674	ENSCPBG00000011715	-	76	34.857
ENSCPBG00000028375	RAB12	65	37.736	ENSCPBG00000023927	RAB22A	81	37.736
ENSCPBG00000028375	RAB12	69	42.941	ENSCPBG00000017056	-	76	42.515
ENSCPBG00000028375	RAB12	65	38.994	ENSCPBG00000000041	RAB6A	76	38.994
ENSCPBG00000028375	RAB12	67	34.132	ENSCPBG00000016033	RAB9A	76	34.132
ENSCPBG00000028375	RAB12	84	38.278	ENSCPBG00000014614	RAB11A	77	42.515
ENSCPBG00000028375	RAB12	67	35.329	ENSCPBG00000001542	RAB9B	83	35.329
ENSCPBG00000028375	RAB12	64	30.818	ENSCPBG00000018286	RHEB	85	30.818
ENSCPBG00000028375	RAB12	67	49.091	ENSCPBG00000015839	-	79	49.091
ENSCPBG00000028375	RAB12	80	39.286	ENSCPBG00000012691	RAB2B	78	43.452
ENSCPBG00000028375	RAB12	71	38.286	ENSCPBG00000011236	-	79	39.412
ENSCPBG00000028375	RAB12	74	40.110	ENSCPBG00000011914	RAB19	85	40.110
ENSCPBG00000028375	RAB12	73	37.640	ENSCPBG00000012712	RAB5B	81	36.517
ENSCPBG00000028375	RAB12	63	33.758	ENSCPBG00000013681	MRAS	80	33.929
ENSCPBG00000028375	RAB12	76	46.524	ENSCPBG00000006855	RAB30	88	46.739
ENSCPBG00000028375	RAB12	84	37.073	ENSCPBG00000025817	RAB25	85	39.560
ENSCPBG00000028375	RAB12	66	41.975	ENSCPBG00000025819	-	79	41.975
ENSCPBG00000028375	RAB12	72	38.674	ENSCPBG00000011245	RAB42	84	38.857
ENSCPBG00000028375	RAB12	70	45.614	ENSCPBG00000012631	RAB35	94	43.455
ENSCPBG00000028375	RAB12	65	40.252	ENSCPBG00000014340	RAB41	75	40.252
ENSCPBG00000028375	RAB12	73	45.055	ENSCPBG00000016907	RAB15	88	43.617
ENSCPBG00000028375	RAB12	69	49.704	ENSCPBG00000013243	RAB1A	82	49.704
ENSCPBG00000028375	RAB12	62	30.519	ENSCPBG00000015094	-	87	31.098
ENSCPBG00000028375	RAB12	62	34.641	ENSCPBG00000022721	RRAS2	83	34.706
ENSCPBG00000028375	RAB12	69	43.452	ENSCPBG00000023254	RAB2A	79	43.452
ENSCPBG00000028375	RAB12	68	42.262	ENSCPBG00000001057	RAB39B	78	42.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000028375	RAB12	100	93.878	ENSG00000206418	RAB12	100	93.878	Homo_sapiens
ENSCPBG00000028375	RAB12	91	89.640	ENSAMEG00000007452	RAB12	99	86.809	Ailuropoda_melanoleuca
ENSCPBG00000028375	RAB12	91	87.444	ENSACIG00000020616	rab12	93	82.456	Amphilophus_citrinellus
ENSCPBG00000028375	RAB12	91	87.892	ENSAOCG00000002130	rab12	93	83.260	Amphiprion_ocellaris
ENSCPBG00000028375	RAB12	91	87.892	ENSAPEG00000013255	rab12	93	83.260	Amphiprion_percula
ENSCPBG00000028375	RAB12	100	82.449	ENSATEG00000019683	rab12	93	82.743	Anabas_testudineus
ENSCPBG00000028375	RAB12	100	86.822	ENSACAG00000003360	RAB12	100	90.310	Anolis_carolinensis
ENSCPBG00000028375	RAB12	91	88.341	ENSACLG00000007696	rab12	93	83.700	Astatotilapia_calliptera
ENSCPBG00000028375	RAB12	91	86.607	ENSAMXG00000004882	rab12	91	83.482	Astyanax_mexicanus
ENSCPBG00000028375	RAB12	100	91.429	ENSBTAG00000010356	RAB12	100	91.837	Bos_taurus
ENSCPBG00000028375	RAB12	100	93.469	ENSCJAG00000015468	RAB12	72	93.469	Callithrix_jacchus
ENSCPBG00000028375	RAB12	100	93.469	ENSCAFG00020023721	RAB12	84	93.878	Canis_lupus_dingo
ENSCPBG00000028375	RAB12	100	91.429	ENSCHIG00000016103	RAB12	100	91.837	Capra_hircus
ENSCPBG00000028375	RAB12	86	96.667	ENSCPOG00000022689	RAB12	100	96.667	Cavia_porcellus
ENSCPBG00000028375	RAB12	100	93.469	ENSCCAG00000022862	RAB12	100	93.469	Cebus_capucinus
ENSCPBG00000028375	RAB12	91	97.768	ENSCATG00000037784	RAB12	99	93.388	Cercocebus_atys
ENSCPBG00000028375	RAB12	100	92.742	ENSCSAG00000017569	RAB12	72	92.742	Chlorocebus_sabaeus
ENSCPBG00000028375	RAB12	90	97.727	ENSCANG00000031453	RAB12	100	97.727	Colobus_angolensis_palliatus
ENSCPBG00000028375	RAB12	100	91.020	ENSCGRG00001006958	Rab12	83	91.020	Cricetulus_griseus_chok1gshd
ENSCPBG00000028375	RAB12	91	87.444	ENSCSEG00000016933	rab12	100	79.268	Cynoglossus_semilaevis
ENSCPBG00000028375	RAB12	91	87.892	ENSCVAG00000003539	rab12	93	82.174	Cyprinodon_variegatus
ENSCPBG00000028375	RAB12	100	83.673	ENSDARG00000089428	rab12	93	83.628	Danio_rerio
ENSCPBG00000028375	RAB12	91	97.768	ENSDNOG00000046064	RAB12	56	93.061	Dasypus_novemcinctus
ENSCPBG00000028375	RAB12	92	97.333	ENSDORG00000008920	Rab12	99	97.333	Dipodomys_ordii
ENSCPBG00000028375	RAB12	80	67.179	ENSEBUG00000006581	rab12	93	67.179	Eptatretus_burgeri
ENSCPBG00000028375	RAB12	100	93.469	ENSEASG00005002926	RAB12	83	93.878	Equus_asinus_asinus
ENSCPBG00000028375	RAB12	100	93.469	ENSECAG00000007384	RAB12	71	93.878	Equus_caballus
ENSCPBG00000028375	RAB12	100	81.224	ENSELUG00000007123	rab12	90	83.636	Esox_lucius
ENSCPBG00000028375	RAB12	100	93.061	ENSFCAG00000027710	RAB12	72	93.469	Felis_catus
ENSCPBG00000028375	RAB12	89	88.128	ENSFHEG00000004319	rab12	93	82.533	Fundulus_heteroclitus
ENSCPBG00000028375	RAB12	85	83.732	ENSGMOG00000012335	rab12	87	83.732	Gadus_morhua
ENSCPBG00000028375	RAB12	100	92.400	ENSGALG00000033608	RAB12	100	93.600	Gallus_gallus
ENSCPBG00000028375	RAB12	91	79.821	ENSGACG00000016639	rab12	100	79.821	Gasterosteus_aculeatus
ENSCPBG00000028375	RAB12	100	99.592	ENSGAGG00000007278	RAB12	100	99.592	Gopherus_agassizii
ENSCPBG00000028375	RAB12	91	88.341	ENSHBUG00000008497	rab12	93	83.700	Haplochromis_burtoni
ENSCPBG00000028375	RAB12	99	87.705	ENSHGLG00000006189	RAB12	95	89.669	Heterocephalus_glaber_female
ENSCPBG00000028375	RAB12	100	80.081	ENSHCOG00000012376	rab12	100	76.829	Hippocampus_comes
ENSCPBG00000028375	RAB12	92	87.111	ENSIPUG00000017401	rab12	91	83.784	Ictalurus_punctatus
ENSCPBG00000028375	RAB12	95	93.966	ENSSTOG00000025122	RAB12	100	93.966	Ictidomys_tridecemlineatus
ENSCPBG00000028375	RAB12	93	96.916	ENSJJAG00000019064	Rab12	99	96.916	Jaculus_jaculus
ENSCPBG00000028375	RAB12	100	80.408	ENSKMAG00000020056	rab12	93	80.973	Kryptolebias_marmoratus
ENSCPBG00000028375	RAB12	100	82.449	ENSLBEG00000013756	rab12	93	82.743	Labrus_bergylta
ENSCPBG00000028375	RAB12	100	86.747	ENSLACG00000010461	RAB12	100	87.149	Latimeria_chalumnae
ENSCPBG00000028375	RAB12	92	90.265	ENSLOCG00000002680	rab12	100	85.484	Lepisosteus_oculatus
ENSCPBG00000028375	RAB12	100	93.496	ENSMFAG00000043551	RAB12	100	93.496	Macaca_fascicularis
ENSCPBG00000028375	RAB12	91	97.768	ENSMNEG00000040853	RAB12	96	93.033	Macaca_nemestrina
ENSCPBG00000028375	RAB12	100	82.449	ENSMAMG00000006862	rab12	93	82.743	Mastacembelus_armatus
ENSCPBG00000028375	RAB12	91	88.341	ENSMZEG00005024316	rab12	93	83.700	Maylandia_zebra
ENSCPBG00000028375	RAB12	83	98.529	ENSMGAG00000009197	RAB12	100	98.529	Meleagris_gallopavo
ENSCPBG00000028375	RAB12	100	91.429	ENSMAUG00000008371	Rab12	83	91.429	Mesocricetus_auratus
ENSCPBG00000028375	RAB12	91	97.321	ENSMICG00000030661	RAB12	99	94.118	Microcebus_murinus
ENSCPBG00000028375	RAB12	89	96.804	ENSMOCG00000000452	Rab12	100	96.804	Microtus_ochrogaster
ENSCPBG00000028375	RAB12	100	92.683	ENSMODG00000021452	RAB12	73	93.089	Monodelphis_domestica
ENSCPBG00000028375	RAB12	93	84.211	ENSMALG00000015762	rab12	93	81.416	Monopterus_albus
ENSCPBG00000028375	RAB12	100	91.429	MGP_CAROLIEiJ_G0021839	Rab12	84	91.429	Mus_caroli
ENSCPBG00000028375	RAB12	100	91.429	ENSMUSG00000023460	Rab12	100	91.429	Mus_musculus
ENSCPBG00000028375	RAB12	100	91.429	MGP_PahariEiJ_G0020826	Rab12	100	91.429	Mus_pahari
ENSCPBG00000028375	RAB12	100	91.429	MGP_SPRETEiJ_G0022750	Rab12	83	91.429	Mus_spretus
ENSCPBG00000028375	RAB12	100	93.061	ENSMLUG00000002883	RAB12	100	93.061	Myotis_lucifugus
ENSCPBG00000028375	RAB12	100	82.041	ENSNGAG00000019722	-	100	82.041	Nannospalax_galili
ENSCPBG00000028375	RAB12	93	96.035	ENSNGAG00000024103	-	99	93.991	Nannospalax_galili
ENSCPBG00000028375	RAB12	91	88.341	ENSNBRG00000014428	rab12	93	83.700	Neolamprologus_brichardi
ENSCPBG00000028375	RAB12	100	93.469	ENSNLEG00000006939	RAB12	100	93.469	Nomascus_leucogenys
ENSCPBG00000028375	RAB12	100	92.683	ENSMEUG00000000493	RAB12	100	92.683	Notamacropus_eugenii
ENSCPBG00000028375	RAB12	89	96.804	ENSODEG00000006414	RAB12	100	96.804	Octodon_degus
ENSCPBG00000028375	RAB12	91	88.341	ENSONIG00000018469	rab12	93	83.700	Oreochromis_niloticus
ENSCPBG00000028375	RAB12	100	83.265	ENSORLG00000003902	rab12	93	83.628	Oryzias_latipes
ENSCPBG00000028375	RAB12	100	83.265	ENSORLG00020005131	rab12	93	83.628	Oryzias_latipes_hni
ENSCPBG00000028375	RAB12	100	83.265	ENSORLG00015007869	rab12	93	83.628	Oryzias_latipes_hsok
ENSCPBG00000028375	RAB12	100	83.265	ENSOMEG00000008191	rab12	93	83.628	Oryzias_melastigma
ENSCPBG00000028375	RAB12	86	98.571	ENSOGAG00000028002	RAB12	99	98.571	Otolemur_garnettii
ENSCPBG00000028375	RAB12	86	96.190	ENSOARG00000000728	RAB12	99	88.115	Ovis_aries
ENSCPBG00000028375	RAB12	84	98.544	ENSPPAG00000009152	RAB12	97	98.544	Pan_paniscus
ENSCPBG00000028375	RAB12	100	93.061	ENSPPRG00000024521	RAB12	100	93.469	Panthera_pardus
ENSCPBG00000028375	RAB12	100	93.469	ENSPTRG00000009853	RAB12	100	93.878	Pan_troglodytes
ENSCPBG00000028375	RAB12	100	92.713	ENSPANG00000009320	RAB12	100	92.713	Papio_anubis
ENSCPBG00000028375	RAB12	78	89.474	ENSPKIG00000008579	rab12	93	83.186	Paramormyrops_kingsleyae
ENSCPBG00000028375	RAB12	89	85.321	ENSPMGG00000001890	rab12	90	81.364	Periophthalmus_magnuspinnatus
ENSCPBG00000028375	RAB12	100	91.837	ENSPEMG00000021032	Rab12	84	91.837	Peromyscus_maniculatus_bairdii
ENSCPBG00000028375	RAB12	100	92.683	ENSPCIG00000010453	RAB12	61	92.683	Phascolarctos_cinereus
ENSCPBG00000028375	RAB12	92	85.841	ENSPFOG00000001579	rab12	93	81.304	Poecilia_formosa
ENSCPBG00000028375	RAB12	92	85.841	ENSPLAG00000013594	rab12	93	81.304	Poecilia_latipinna
ENSCPBG00000028375	RAB12	92	85.841	ENSPMEG00000010417	rab12	93	81.304	Poecilia_mexicana
ENSCPBG00000028375	RAB12	92	85.841	ENSPREG00000017487	rab12	93	81.304	Poecilia_reticulata
ENSCPBG00000028375	RAB12	100	93.878	ENSPPYG00000009015	-	72	93.878	Pongo_abelii
ENSCPBG00000028375	RAB12	100	92.653	ENSPCAG00000015007	RAB12	100	93.061	Procavia_capensis
ENSCPBG00000028375	RAB12	100	93.061	ENSPCOG00000019816	RAB12	100	93.469	Propithecus_coquereli
ENSCPBG00000028375	RAB12	100	93.061	ENSPVAG00000002757	RAB12	100	93.469	Pteropus_vampyrus
ENSCPBG00000028375	RAB12	91	88.341	ENSPNYG00000005654	rab12	93	83.700	Pundamilia_nyererei
ENSCPBG00000028375	RAB12	91	88.341	ENSPNYG00000023905	rab12	93	83.700	Pundamilia_nyererei
ENSCPBG00000028375	RAB12	91	87.054	ENSPNAG00000015031	rab12	93	82.609	Pygocentrus_nattereri
ENSCPBG00000028375	RAB12	100	84.274	ENSRNOG00000019295	Rab12	100	84.677	Rattus_norvegicus
ENSCPBG00000028375	RAB12	91	97.768	ENSRBIG00000028760	RAB12	99	94.894	Rhinopithecus_bieti
ENSCPBG00000028375	RAB12	93	96.916	ENSRROG00000019249	RAB12	95	96.916	Rhinopithecus_roxellana
ENSCPBG00000028375	RAB12	92	90.708	ENSSBOG00000021125	RAB12	91	87.395	Saimiri_boliviensis_boliviensis
ENSCPBG00000028375	RAB12	92	90.708	ENSSHAG00000001489	RAB12	100	90.708	Sarcophilus_harrisii
ENSCPBG00000028375	RAB12	89	86.758	ENSSMAG00000012678	rab12	93	81.858	Scophthalmus_maximus
ENSCPBG00000028375	RAB12	100	82.449	ENSSDUG00000008505	rab12	93	82.743	Seriola_dumerili
ENSCPBG00000028375	RAB12	100	82.449	ENSSLDG00000022239	rab12	93	82.743	Seriola_lalandi_dorsalis
ENSCPBG00000028375	RAB12	100	95.122	ENSSPUG00000003222	RAB12	100	95.122	Sphenodon_punctatus
ENSCPBG00000028375	RAB12	91	87.444	ENSSPAG00000010822	rab12	93	82.819	Stegastes_partitus
ENSCPBG00000028375	RAB12	100	92.245	ENSSSCG00000038026	RAB12	100	91.837	Sus_scrofa
ENSCPBG00000028375	RAB12	100	93.200	ENSTGUG00000009889	RAB12	100	93.200	Taeniopygia_guttata
ENSCPBG00000028375	RAB12	97	84.034	ENSTRUG00000024455	rab12	90	84.932	Takifugu_rubripes
ENSCPBG00000028375	RAB12	97	83.193	ENSTNIG00000014859	rab12	93	80.531	Tetraodon_nigroviridis
ENSCPBG00000028375	RAB12	91	96.396	ENSTTRG00000008711	RAB12	100	96.396	Tursiops_truncatus
ENSCPBG00000028375	RAB12	100	93.469	ENSUAMG00000018092	RAB12	100	93.878	Ursus_americanus
ENSCPBG00000028375	RAB12	92	95.556	ENSVVUG00000011748	RAB12	100	95.556	Vulpes_vulpes
ENSCPBG00000028375	RAB12	100	88.400	ENSXETG00000004289	rab12	79	88.400	Xenopus_tropicalis
ENSCPBG00000028375	RAB12	92	84.956	ENSXCOG00000019310	rab12	93	80.870	Xiphophorus_couchianus
ENSCPBG00000028375	RAB12	92	85.398	ENSXMAG00000023617	rab12	93	80.870	Xiphophorus_maculatus