EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPOG00000000035 (Gene tree)
Gene ID
100716820
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
60116 bases
Position
chrDS562887.1:20534155-20594270
Accession
100716820
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000000030tRNA_anti-codonPF01336.259.8e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000000035RPA1-2015034XM_003469537ENSCPOP00000000030616 (aa)XP_003469585H0UT14
Gene Model
Click here to download ENSCPOG00000000035's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000035's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000000035RPA19962.255ENSAPOG00000011658rpa19963.103Acanthochromis_polyacanthus
ENSCPOG00000000035RPA19956.430ENSAPOG00000019409RPA19856.430Acanthochromis_polyacanthus
ENSCPOG00000000035RPA19886.491ENSAMEG00000007706RPA19886.491Ailuropoda_melanoleuca
ENSCPOG00000000035RPA19557.983ENSACIG00000012881RPA19957.983Amphilophus_citrinellus
ENSCPOG00000000035RPA19657.797ENSACIG00000007277rpa19957.797Amphilophus_citrinellus
ENSCPOG00000000035RPA19962.908ENSAOCG00000023376rpa19963.385Amphiprion_ocellaris
ENSCPOG00000000035RPA19954.685ENSAOCG00000009003RPA19954.224Amphiprion_ocellaris
ENSCPOG00000000035RPA19953.003ENSAPEG00000019132RPA19953.303Amphiprion_percula
ENSCPOG00000000035RPA19963.072ENSAPEG00000008634rpa19963.558Amphiprion_percula
ENSCPOG00000000035RPA19954.893ENSATEG00000006443RPA19954.893Anabas_testudineus
ENSCPOG00000000035RPA19564.494ENSATEG00000022024rpa19964.494Anabas_testudineus
ENSCPOG00000000035RPA19859.823ENSAPLG00000012442RPA110059.823Anas_platyrhynchos
ENSCPOG00000000035RPA19961.066ENSACAG00000014490RPA19962.258Anolis_carolinensis
ENSCPOG00000000035RPA19888.391ENSANAG00000023456RPA110088.391Aotus_nancymaae
ENSCPOG00000000035RPA19956.740ENSACLG00000005223RPA19956.740Astatotilapia_calliptera
ENSCPOG00000000035RPA19363.826ENSACLG00000006640rpa19963.826Astatotilapia_calliptera
ENSCPOG00000000035RPA19960.813ENSAMXG00000008418rpa19961.364Astyanax_mexicanus
ENSCPOG00000000035RPA110086.688ENSBTAG00000009711RPA110086.688Bos_taurus
ENSCPOG00000000035RPA110087.825ENSCJAG00000001848RPA110087.825Callithrix_jacchus
ENSCPOG00000000035RPA110086.688ENSCAFG00000019249RPA110086.688Canis_familiaris
ENSCPOG00000000035RPA110086.688ENSCAFG00020009847RPA110086.688Canis_lupus_dingo
ENSCPOG00000000035RPA110086.851ENSCHIG00000026308RPA110086.851Capra_hircus
ENSCPOG00000000035RPA110087.682ENSTSYG00000003482-10087.682Carlito_syrichta
ENSCPOG00000000035RPA110078.029ENSCCAG00000010981RPA110078.029Cebus_capucinus
ENSCPOG00000000035RPA19994.472ENSCLAG00000005185-10094.472Chinchilla_lanigera
ENSCPOG00000000035RPA110089.123ENSCLAG00000015045-10089.123Chinchilla_lanigera
ENSCPOG00000000035RPA110076.737ENSCSAG00000013833RPA110077.097Chlorocebus_sabaeus
ENSCPOG00000000035RPA19583.503ENSCHOG00000013540-10083.503Choloepus_hoffmanni
ENSCPOG00000000035RPA17189.977ENSCHOG00000009454-10089.977Choloepus_hoffmanni
ENSCPOG00000000035RPA19976.059ENSCPBG00000020377RPA19976.801Chrysemys_picta_bellii
ENSCPOG00000000035RPA19942.717ENSCING00000023482-9842.717Ciona_intestinalis
ENSCPOG00000000035RPA19884.628ENSCANG00000030911RPA110084.628Colobus_angolensis_palliatus
ENSCPOG00000000035RPA19986.893ENSCGRG00001008197Rpa19986.893Cricetulus_griseus_chok1gshd
ENSCPOG00000000035RPA18187.179ENSCGRG00000000582Rpa19987.179Cricetulus_griseus_crigri
ENSCPOG00000000035RPA19951.429ENSCSEG00000012726RPA19853.253Cynoglossus_semilaevis
ENSCPOG00000000035RPA19959.380ENSCSEG00000013066rpa19959.380Cynoglossus_semilaevis
ENSCPOG00000000035RPA19652.842ENSCVAG00000013446-9652.842Cyprinodon_variegatus
ENSCPOG00000000035RPA19962.890ENSCVAG00000019431rpa19964.223Cyprinodon_variegatus
ENSCPOG00000000035RPA19962.825ENSDARG00000003938rpa19962.825Danio_rerio
ENSCPOG00000000035RPA19886.799ENSDNOG00000017218RPA19886.799Dasypus_novemcinctus
ENSCPOG00000000035RPA19988.925ENSDORG00000006199Rpa19988.925Dipodomys_ordii
ENSCPOG00000000035RPA19942.029FBgn0010173RpA-709942.512Drosophila_melanogaster
ENSCPOG00000000035RPA18384.536ENSETEG00000017608RPA18284.536Echinops_telfairi
ENSCPOG00000000035RPA19888.040ENSEASG00005009372RPA110085.945Equus_asinus_asinus
ENSCPOG00000000035RPA110087.987ENSECAG00000023886RPA110087.987Equus_caballus
ENSCPOG00000000035RPA16888.571ENSEEUG00000002186-6888.571Erinaceus_europaeus
ENSCPOG00000000035RPA18856.514ENSELUG00000006136RPA19956.514Esox_lucius
ENSCPOG00000000035RPA19960.778ENSELUG00000021071rpa19960.940Esox_lucius
ENSCPOG00000000035RPA110085.737ENSFCAG00000006306RPA19985.737Felis_catus
ENSCPOG00000000035RPA110073.829ENSFALG00000006575RPA19973.829Ficedula_albicollis
ENSCPOG00000000035RPA19993.974ENSFDAG00000007720RPA19993.974Fukomys_damarensis
ENSCPOG00000000035RPA19962.007ENSFHEG00000003580rpa19962.007Fundulus_heteroclitus
ENSCPOG00000000035RPA19958.756ENSGMOG00000010382rpa19958.756Gadus_morhua
ENSCPOG00000000035RPA110073.744ENSGALG00000003072RPA19973.744Gallus_gallus
ENSCPOG00000000035RPA19962.768ENSGAFG00000012916rpa19962.768Gambusia_affinis
ENSCPOG00000000035RPA19954.407ENSGAFG00000020953RPA19954.407Gambusia_affinis
ENSCPOG00000000035RPA19960.749ENSGACG00000010856rpa19960.749Gasterosteus_aculeatus
ENSCPOG00000000035RPA19975.896ENSGAGG00000013611RPA19975.896Gopherus_agassizii
ENSCPOG00000000035RPA110085.714ENSGGOG00000014186RPA110085.714Gorilla_gorilla
ENSCPOG00000000035RPA19652.588ENSHBUG00000009348RPA19952.588Haplochromis_burtoni
ENSCPOG00000000035RPA19962.927ENSHBUG00000017773rpa19962.927Haplochromis_burtoni
ENSCPOG00000000035RPA19993.648ENSHGLG00000008846RPA110093.648Heterocephalus_glaber_female
ENSCPOG00000000035RPA110087.825ENSHGLG00100000799-10087.825Heterocephalus_glaber_male
ENSCPOG00000000035RPA110079.545ENSHGLG00100002005-10079.545Heterocephalus_glaber_male
ENSCPOG00000000035RPA19993.648ENSHGLG00100017755-10093.648Heterocephalus_glaber_male
ENSCPOG00000000035RPA19945.161ENSHCOG00000000351RPA19945.161Hippocampus_comes
ENSCPOG00000000035RPA19960.390ENSHCOG00000001401rpa19960.556Hippocampus_comes
ENSCPOG00000000035RPA19962.136ENSIPUG00000004400rpa19962.136Ictalurus_punctatus
ENSCPOG00000000035RPA19881.908ENSSTOG00000022475RPA19881.908Ictidomys_tridecemlineatus
ENSCPOG00000000035RPA19590.306ENSJJAG00000000876Rpa19890.306Jaculus_jaculus
ENSCPOG00000000035RPA19961.175ENSKMAG00000005605rpa19961.827Kryptolebias_marmoratus
ENSCPOG00000000035RPA19954.634ENSKMAG00000000234RPA19954.634Kryptolebias_marmoratus
ENSCPOG00000000035RPA19962.255ENSLBEG00000021604rpa19962.255Labrus_bergylta
ENSCPOG00000000035RPA19963.781ENSLBEG00000002281RPA18663.781Labrus_bergylta
ENSCPOG00000000035RPA18167.000ENSLACG00000007210RPA19967.000Latimeria_chalumnae
ENSCPOG00000000035RPA19966.450ENSLOCG00000006397rpa19966.450Lepisosteus_oculatus
ENSCPOG00000000035RPA19984.430ENSLAFG00000015354RPA19984.430Loxodonta_africana
ENSCPOG00000000035RPA18288.735ENSMFAG00000036138-10089.152Macaca_fascicularis
ENSCPOG00000000035RPA110081.686ENSMMUG00000002442-10081.686Macaca_mulatta
ENSCPOG00000000035RPA19888.264ENSMMUG00000011604-10088.614Macaca_mulatta
ENSCPOG00000000035RPA18984.778ENSMNEG00000029837-10084.778Macaca_nemestrina
ENSCPOG00000000035RPA110084.903ENSMNEG00000031632-10085.251Macaca_nemestrina
ENSCPOG00000000035RPA19882.343ENSMLEG00000038768-10082.702Mandrillus_leucophaeus
ENSCPOG00000000035RPA19952.522ENSMAMG00000020097RPA19952.515Mastacembelus_armatus
ENSCPOG00000000035RPA19962.806ENSMAMG00000017993rpa19962.806Mastacembelus_armatus
ENSCPOG00000000035RPA19962.927ENSMZEG00005007551rpa19962.927Maylandia_zebra
ENSCPOG00000000035RPA19956.740ENSMZEG00005024731RPA19956.740Maylandia_zebra
ENSCPOG00000000035RPA19973.443ENSMGAG00000005315RPA19873.443Meleagris_gallopavo
ENSCPOG00000000035RPA19787.500ENSMAUG00000010474Rpa19987.500Mesocricetus_auratus
ENSCPOG00000000035RPA110087.825ENSMICG00000012867RPA110087.825Microcebus_murinus
ENSCPOG00000000035RPA19986.949ENSMOCG00000013019Rpa19986.949Microtus_ochrogaster
ENSCPOG00000000035RPA19961.175ENSMMOG00000014292rpa19962.395Mola_mola
ENSCPOG00000000035RPA19659.912ENSMMOG00000010868RPA19759.912Mola_mola
ENSCPOG00000000035RPA19982.276ENSMODG00000010549RPA19982.276Monodelphis_domestica
ENSCPOG00000000035RPA19963.934ENSMALG00000011453rpa19964.098Monopterus_albus
ENSCPOG00000000035RPA19162.187ENSMALG00000001208RPA17762.187Monopterus_albus
ENSCPOG00000000035RPA19986.039MGP_CAROLIEiJ_G0016734Rpa19986.039Mus_caroli
ENSCPOG00000000035RPA19983.923ENSMUSG00000000751Rpa19983.923Mus_musculus
ENSCPOG00000000035RPA19986.914MGP_PahariEiJ_G0017871Rpa19986.914Mus_pahari
ENSCPOG00000000035RPA19983.788MGP_SPRETEiJ_G0017577Rpa19983.788Mus_spretus
ENSCPOG00000000035RPA110084.903ENSMPUG00000013119RPA110084.903Mustela_putorius_furo
ENSCPOG00000000035RPA110084.380ENSMLUG00000006113RPA110084.380Myotis_lucifugus
ENSCPOG00000000035RPA19586.587ENSNGAG00000004522Rpa19486.587Nannospalax_galili
ENSCPOG00000000035RPA19654.975ENSNBRG00000009672RPA19554.975Neolamprologus_brichardi
ENSCPOG00000000035RPA19463.793ENSNBRG00000020595rpa19963.793Neolamprologus_brichardi
ENSCPOG00000000035RPA110087.987ENSNLEG00000017149RPA110087.987Nomascus_leucogenys
ENSCPOG00000000035RPA19872.020ENSMEUG00000006714RPA19972.020Notamacropus_eugenii
ENSCPOG00000000035RPA19591.960ENSODEG00000009038RPA19691.960Octodon_degus
ENSCPOG00000000035RPA19963.651ENSONIG00000013135rpa19963.651Oreochromis_niloticus
ENSCPOG00000000035RPA19881.758ENSOANG00000010880RPA19981.758Ornithorhynchus_anatinus
ENSCPOG00000000035RPA110083.282ENSOCUG00000001504RPA110083.282Oryctolagus_cuniculus
ENSCPOG00000000035RPA19962.255ENSORLG00000004856rpa19962.255Oryzias_latipes
ENSCPOG00000000035RPA19953.425ENSORLG00000003368RPA19953.425Oryzias_latipes
ENSCPOG00000000035RPA19962.418ENSORLG00020008980rpa19962.418Oryzias_latipes_hni
ENSCPOG00000000035RPA19951.868ENSORLG00020015284RPA19951.868Oryzias_latipes_hni
ENSCPOG00000000035RPA19962.418ENSORLG00015013982rpa19962.418Oryzias_latipes_hsok
ENSCPOG00000000035RPA17160.230ENSORLG00015005867-9860.230Oryzias_latipes_hsok
ENSCPOG00000000035RPA19953.385ENSORLG00015020383RPA19953.385Oryzias_latipes_hsok
ENSCPOG00000000035RPA19960.229ENSOMEG00000004704rpa19960.229Oryzias_melastigma
ENSCPOG00000000035RPA19654.934ENSOMEG00000011040RPA19956.357Oryzias_melastigma
ENSCPOG00000000035RPA110087.500ENSOGAG00000005581-10087.500Otolemur_garnettii
ENSCPOG00000000035RPA19482.807ENSOGAG00000029379-10082.807Otolemur_garnettii
ENSCPOG00000000035RPA110086.851ENSOARG00000014479RPA110086.851Ovis_aries
ENSCPOG00000000035RPA110088.474ENSPPAG00000039680RPA110088.474Pan_paniscus
ENSCPOG00000000035RPA110085.251ENSPPRG00000011807RPA19985.251Panthera_pardus
ENSCPOG00000000035RPA110084.927ENSPTIG00000007898RPA19984.927Panthera_tigris_altaica
ENSCPOG00000000035RPA110088.636ENSPTRG00000008539RPA110088.636Pan_troglodytes
ENSCPOG00000000035RPA110088.149ENSPANG00000024592RPA110088.493Papio_anubis
ENSCPOG00000000035RPA19460.892ENSPKIG00000008053rpa19461.063Paramormyrops_kingsleyae
ENSCPOG00000000035RPA19775.292ENSPSIG00000015617RPA19975.292Pelodiscus_sinensis
ENSCPOG00000000035RPA19861.526ENSPMGG00000011589rpa19961.692Periophthalmus_magnuspinnatus
ENSCPOG00000000035RPA19953.323ENSPMGG00000000543RPA19956.338Periophthalmus_magnuspinnatus
ENSCPOG00000000035RPA19986.786ENSPEMG00000021061Rpa19986.786Peromyscus_maniculatus_bairdii
ENSCPOG00000000035RPA110080.875ENSPCIG00000019049RPA19981.361Phascolarctos_cinereus
ENSCPOG00000000035RPA19963.322ENSPFOG00000003987rpa19963.322Poecilia_formosa
ENSCPOG00000000035RPA19453.772ENSPLAG00000008844-9753.772Poecilia_latipinna
ENSCPOG00000000035RPA19963.322ENSPLAG00000004984rpa19963.322Poecilia_latipinna
ENSCPOG00000000035RPA19453.451ENSPMEG00000003627-9753.623Poecilia_mexicana
ENSCPOG00000000035RPA19963.322ENSPMEG00000020602rpa19963.322Poecilia_mexicana
ENSCPOG00000000035RPA19256.316ENSPREG00000010174rpa19556.514Poecilia_reticulata
ENSCPOG00000000035RPA19952.725ENSPREG00000010119RPA110052.006Poecilia_reticulata
ENSCPOG00000000035RPA110088.312ENSPCOG00000001799RPA110088.312Propithecus_coquereli
ENSCPOG00000000035RPA19987.622ENSPVAG00000002149RPA19987.622Pteropus_vampyrus
ENSCPOG00000000035RPA19963.089ENSPNYG00000016316rpa19963.778Pundamilia_nyererei
ENSCPOG00000000035RPA19956.426ENSPNYG00000024165RPA19956.426Pundamilia_nyererei
ENSCPOG00000000035RPA19854.561ENSPNAG00000008599rpa19656.947Pygocentrus_nattereri
ENSCPOG00000000035RPA19987.113ENSRNOG00000003123Rpa19987.113Rattus_norvegicus
ENSCPOG00000000035RPA110088.006ENSRBIG00000036587RPA110088.006Rhinopithecus_bieti
ENSCPOG00000000035RPA110082.334ENSRROG00000043278RPA110082.334Rhinopithecus_roxellana
ENSCPOG00000000035RPA19732.020YAR007CRFA19732.020Saccharomyces_cerevisiae
ENSCPOG00000000035RPA19884.768ENSSBOG00000030233RPA19984.768Saimiri_boliviensis_boliviensis
ENSCPOG00000000035RPA19981.997ENSSHAG00000007969RPA19882.160Sarcophilus_harrisii
ENSCPOG00000000035RPA19963.072ENSSFOG00015005362rpa19263.072Scleropages_formosus
ENSCPOG00000000035RPA19952.338ENSSMAG00000019746RPA19952.338Scophthalmus_maximus
ENSCPOG00000000035RPA19952.346ENSSDUG00000016358RPA19952.493Seriola_dumerili
ENSCPOG00000000035RPA19963.785ENSSDUG00000011949rpa19963.785Seriola_dumerili
ENSCPOG00000000035RPA19964.111ENSSLDG00000011806rpa19964.111Seriola_lalandi_dorsalis
ENSCPOG00000000035RPA19949.343ENSSLDG00000020784RPA19951.825Seriola_lalandi_dorsalis
ENSCPOG00000000035RPA19868.760ENSSARG00000007506RPA110068.760Sorex_araneus
ENSCPOG00000000035RPA19772.315ENSSPUG00000007223RPA19972.315Sphenodon_punctatus
ENSCPOG00000000035RPA19657.797ENSSPAG00000011165RPA19757.699Stegastes_partitus
ENSCPOG00000000035RPA19962.806ENSSPAG00000009903rpa19962.806Stegastes_partitus
ENSCPOG00000000035RPA19886.899ENSSSCG00000017822RPA110086.899Sus_scrofa
ENSCPOG00000000035RPA110073.582ENSTGUG00000005775RPA19973.582Taeniopygia_guttata
ENSCPOG00000000035RPA19963.322ENSTRUG00000003616rpa19963.322Takifugu_rubripes
ENSCPOG00000000035RPA19955.299ENSTRUG00000000405RPA19556.634Takifugu_rubripes
ENSCPOG00000000035RPA19964.228ENSTNIG00000016199rpa19964.228Tetraodon_nigroviridis
ENSCPOG00000000035RPA17893.023ENSTBEG00000002709RPA18193.023Tupaia_belangeri
ENSCPOG00000000035RPA19986.341ENSTTRG00000001169RPA19986.341Tursiops_truncatus
ENSCPOG00000000035RPA18893.617ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSCPOG00000000035RPA110086.201ENSUMAG00000009328RPA110086.201Ursus_maritimus
ENSCPOG00000000035RPA110085.552ENSVPAG00000009443RPA110085.552Vicugna_pacos
ENSCPOG00000000035RPA110086.688ENSVVUG00000021715RPA110086.688Vulpes_vulpes
ENSCPOG00000000035RPA19972.668ENSXETG00000013538rpa19973.127Xenopus_tropicalis
ENSCPOG00000000035RPA19555.973ENSXCOG00000009899-9955.973Xiphophorus_couchianus
ENSCPOG00000000035RPA19360.453ENSXCOG00000010068rpa19461.802Xiphophorus_couchianus
ENSCPOG00000000035RPA19164.384ENSXMAG00000010333RPA18864.384Xiphophorus_maculatus
ENSCPOG00000000035RPA19962.171ENSXMAG00000004102rpa19963.732Xiphophorus_maculatus

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