EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000000204 (Gene tree)
Gene ID: 100718963
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 82119 bases
Position: chrDS562873.1:27995273-28077391
Accession: 100718963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000178	PPR	PF01535.20	6e-31	1	6
ENSCPOP00000000178	PPR	PF01535.20	6e-31	2	6
ENSCPOP00000000178	PPR	PF01535.20	6e-31	3	6
ENSCPOP00000000178	PPR	PF01535.20	6e-31	4	6
ENSCPOP00000000178	PPR	PF01535.20	6e-31	5	6
ENSCPOP00000000178	PPR	PF01535.20	6e-31	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000000207	LRPPRC-201	5160	XM_003473055	ENSCPOP00000000178	1203 (aa)	XP_003473103	H0UTE6

Gene Model

Click here to download ENSCPOG00000000204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000000204	LRPPRC	99	50.532	ENSAPOG00000016610	lrpprc	85	50.532	Acanthochromis_polyacanthus
ENSCPOG00000000204	LRPPRC	99	79.765	ENSAMEG00000005852	LRPPRC	100	79.570	Ailuropoda_melanoleuca
ENSCPOG00000000204	LRPPRC	99	48.216	ENSACIG00000009604	lrpprc	84	48.216	Amphilophus_citrinellus
ENSCPOG00000000204	LRPPRC	99	50.774	ENSAOCG00000005886	lrpprc	85	50.774	Amphiprion_ocellaris
ENSCPOG00000000204	LRPPRC	99	52.022	ENSAPEG00000002937	lrpprc	85	52.022	Amphiprion_percula
ENSCPOG00000000204	LRPPRC	90	58.842	ENSATEG00000010555	lrpprc	83	58.842	Anabas_testudineus
ENSCPOG00000000204	LRPPRC	100	61.956	ENSACAG00000029278	LRPPRC	86	61.956	Anolis_carolinensis
ENSCPOG00000000204	LRPPRC	100	77.952	ENSANAG00000027440	LRPPRC	87	78.035	Aotus_nancymaae
ENSCPOG00000000204	LRPPRC	99	48.318	ENSACLG00000023712	lrpprc	88	48.318	Astatotilapia_calliptera
ENSCPOG00000000204	LRPPRC	100	78.035	ENSCJAG00000000794	LRPPRC	87	78.117	Callithrix_jacchus
ENSCPOG00000000204	LRPPRC	99	80.897	ENSCHIG00000020173	LRPPRC	87	80.897	Capra_hircus
ENSCPOG00000000204	LRPPRC	100	75.082	ENSCAPG00000013631	LRPPRC	88	75.082	Cavia_aperea
ENSCPOG00000000204	LRPPRC	100	78.246	ENSCCAG00000031900	LRPPRC	87	78.246	Cebus_capucinus
ENSCPOG00000000204	LRPPRC	100	78.282	ENSCATG00000014187	LRPPRC	83	78.365	Cercocebus_atys
ENSCPOG00000000204	LRPPRC	99	85.714	ENSCLAG00000005203	LRPPRC	86	85.714	Chinchilla_lanigera
ENSCPOG00000000204	LRPPRC	100	78.860	ENSCSAG00000013233	LRPPRC	87	78.860	Chlorocebus_sabaeus
ENSCPOG00000000204	LRPPRC	82	76.890	ENSCHOG00000003631	LRPPRC	71	76.890	Choloepus_hoffmanni
ENSCPOG00000000204	LRPPRC	100	74.959	ENSCANG00000034961	LRPPRC	85	83.471	Colobus_angolensis_palliatus
ENSCPOG00000000204	LRPPRC	100	76.285	ENSCGRG00001016261	Lrpprc	87	76.285	Cricetulus_griseus_chok1gshd
ENSCPOG00000000204	LRPPRC	100	76.285	ENSCGRG00000004072	Lrpprc	87	76.285	Cricetulus_griseus_crigri
ENSCPOG00000000204	LRPPRC	99	40.016	ENSCSEG00000003850	lrpprc	82	40.016	Cynoglossus_semilaevis
ENSCPOG00000000204	LRPPRC	100	50.327	ENSCVAG00000012967	lrpprc	86	50.327	Cyprinodon_variegatus
ENSCPOG00000000204	LRPPRC	99	48.450	ENSDARG00000043970	lrpprc	84	48.450	Danio_rerio
ENSCPOG00000000204	LRPPRC	79	58.010	ENSDNOG00000032336	-	83	58.010	Dasypus_novemcinctus
ENSCPOG00000000204	LRPPRC	100	78.542	ENSDNOG00000012594	-	86	78.542	Dasypus_novemcinctus
ENSCPOG00000000204	LRPPRC	100	82.504	ENSDORG00000012233	Lrpprc	87	82.504	Dipodomys_ordii
ENSCPOG00000000204	LRPPRC	99	77.197	ENSETEG00000006657	LRPPRC	86	77.197	Echinops_telfairi
ENSCPOG00000000204	LRPPRC	85	72.289	ENSEEUG00000012340	LRPPRC	80	72.289	Erinaceus_europaeus
ENSCPOG00000000204	LRPPRC	99	48.467	ENSELUG00000012803	lrpprc	88	48.467	Esox_lucius
ENSCPOG00000000204	LRPPRC	99	82.104	ENSFCAG00000013468	LRPPRC	87	82.104	Felis_catus
ENSCPOG00000000204	LRPPRC	99	54.839	ENSFALG00000012738	LRPPRC	89	54.839	Ficedula_albicollis
ENSCPOG00000000204	LRPPRC	100	81.245	ENSFDAG00000015328	LRPPRC	86	81.245	Fukomys_damarensis
ENSCPOG00000000204	LRPPRC	99	50.000	ENSFHEG00000019604	lrpprc	85	50.000	Fundulus_heteroclitus
ENSCPOG00000000204	LRPPRC	99	46.893	ENSGMOG00000008337	lrpprc	87	46.893	Gadus_morhua
ENSCPOG00000000204	LRPPRC	99	49.712	ENSGAFG00000001455	lrpprc	86	49.712	Gambusia_affinis
ENSCPOG00000000204	LRPPRC	99	48.527	ENSGACG00000010679	lrpprc	90	48.527	Gasterosteus_aculeatus
ENSCPOG00000000204	LRPPRC	99	51.024	ENSHBUG00000000393	lrpprc	83	51.024	Haplochromis_burtoni
ENSCPOG00000000204	LRPPRC	100	84.967	ENSHGLG00000006123	LRPPRC	86	84.967	Heterocephalus_glaber_female
ENSCPOG00000000204	LRPPRC	69	85.474	ENSHGLG00100005960	-	100	85.474	Heterocephalus_glaber_male
ENSCPOG00000000204	LRPPRC	97	48.189	ENSHCOG00000002107	lrpprc	86	48.189	Hippocampus_comes
ENSCPOG00000000204	LRPPRC	99	50.814	ENSIPUG00000009406	lrpprc	85	50.814	Ictalurus_punctatus
ENSCPOG00000000204	LRPPRC	100	83.264	ENSSTOG00000011185	LRPPRC	87	83.264	Ictidomys_tridecemlineatus
ENSCPOG00000000204	LRPPRC	100	79.039	ENSJJAG00000020475	Lrpprc	87	79.039	Jaculus_jaculus
ENSCPOG00000000204	LRPPRC	99	46.420	ENSKMAG00000003287	lrpprc	74	46.420	Kryptolebias_marmoratus
ENSCPOG00000000204	LRPPRC	97	48.616	ENSLBEG00000023225	lrpprc	84	48.857	Labrus_bergylta
ENSCPOG00000000204	LRPPRC	100	60.682	ENSLACG00000014030	LRPPRC	86	60.682	Latimeria_chalumnae
ENSCPOG00000000204	LRPPRC	99	56.884	ENSLOCG00000016390	lrpprc	82	56.884	Lepisosteus_oculatus
ENSCPOG00000000204	LRPPRC	99	74.586	ENSLAFG00000008614	LRPPRC	86	74.586	Loxodonta_africana
ENSCPOG00000000204	LRPPRC	100	78.200	ENSMFAG00000041560	LRPPRC	87	75.616	Macaca_fascicularis
ENSCPOG00000000204	LRPPRC	100	78.365	ENSMMUG00000019841	LRPPRC	92	78.448	Macaca_mulatta
ENSCPOG00000000204	LRPPRC	100	78.365	ENSMNEG00000031613	LRPPRC	87	78.448	Macaca_nemestrina
ENSCPOG00000000204	LRPPRC	98	46.417	ENSMAMG00000021835	lrpprc	85	46.821	Mastacembelus_armatus
ENSCPOG00000000204	LRPPRC	99	50.860	ENSMZEG00005027379	lrpprc	85	50.860	Maylandia_zebra
ENSCPOG00000000204	LRPPRC	100	77.032	ENSMAUG00000012118	Lrpprc	89	76.119	Mesocricetus_auratus
ENSCPOG00000000204	LRPPRC	99	81.245	ENSMICG00000010486	LRPPRC	86	81.245	Microcebus_murinus
ENSCPOG00000000204	LRPPRC	100	79.436	ENSMOCG00000006048	Lrpprc	87	79.436	Microtus_ochrogaster
ENSCPOG00000000204	LRPPRC	99	47.697	ENSMMOG00000007830	lrpprc	85	47.697	Mola_mola
ENSCPOG00000000204	LRPPRC	100	68.092	ENSMODG00000000648	LRPPRC	90	68.092	Monodelphis_domestica
ENSCPOG00000000204	LRPPRC	99	48.475	ENSMALG00000001271	lrpprc	85	48.475	Monopterus_albus
ENSCPOG00000000204	LRPPRC	99	79.470	ENSMPUG00000011800	LRPPRC	84	81.936	Mustela_putorius_furo
ENSCPOG00000000204	LRPPRC	99	80.629	ENSMLUG00000010575	LRPPRC	86	80.629	Myotis_lucifugus
ENSCPOG00000000204	LRPPRC	100	80.100	ENSNGAG00000013069	Lrpprc	87	80.100	Nannospalax_galili
ENSCPOG00000000204	LRPPRC	99	47.025	ENSNBRG00000013202	lrpprc	90	47.025	Neolamprologus_brichardi
ENSCPOG00000000204	LRPPRC	100	77.216	ENSNLEG00000016782	LRPPRC	86	77.216	Nomascus_leucogenys
ENSCPOG00000000204	LRPPRC	98	74.278	ENSOPRG00000016774	LRPPRC	85	74.278	Ochotona_princeps
ENSCPOG00000000204	LRPPRC	100	86.888	ENSODEG00000011211	LRPPRC	87	86.888	Octodon_degus
ENSCPOG00000000204	LRPPRC	99	50.778	ENSONIG00000000917	lrpprc	86	50.741	Oreochromis_niloticus
ENSCPOG00000000204	LRPPRC	62	62.402	ENSOANG00000014670	-	99	62.402	Ornithorhynchus_anatinus
ENSCPOG00000000204	LRPPRC	99	81.411	ENSOCUG00000015046	LRPPRC	83	81.494	Oryctolagus_cuniculus
ENSCPOG00000000204	LRPPRC	99	47.286	ENSORLG00000004605	lrpprc	87	45.740	Oryzias_latipes
ENSCPOG00000000204	LRPPRC	99	49.877	ENSORLG00020012536	lrpprc	95	49.544	Oryzias_latipes_hni
ENSCPOG00000000204	LRPPRC	97	50.135	ENSORLG00015018270	lrpprc	86	50.135	Oryzias_latipes_hsok
ENSCPOG00000000204	LRPPRC	100	78.045	ENSOGAG00000012798	LRPPRC	87	78.045	Otolemur_garnettii
ENSCPOG00000000204	LRPPRC	99	80.929	ENSOARG00000006522	LRPPRC	86	80.929	Ovis_aries
ENSCPOG00000000204	LRPPRC	100	76.116	ENSPPAG00000040876	LRPPRC	86	76.218	Pan_paniscus
ENSCPOG00000000204	LRPPRC	99	81.690	ENSPPRG00000006578	LRPPRC	87	81.690	Panthera_pardus
ENSCPOG00000000204	LRPPRC	99	81.856	ENSPTIG00000000933	LRPPRC	87	81.856	Panthera_tigris_altaica
ENSCPOG00000000204	LRPPRC	100	78.542	ENSPTRG00000011880	LRPPRC	87	78.542	Pan_troglodytes
ENSCPOG00000000204	LRPPRC	100	78.282	ENSPANG00000020731	LRPPRC	83	78.282	Papio_anubis
ENSCPOG00000000204	LRPPRC	93	55.272	ENSPKIG00000022232	lrpprc	99	48.303	Paramormyrops_kingsleyae
ENSCPOG00000000204	LRPPRC	71	63.785	ENSPSIG00000006830	-	98	63.785	Pelodiscus_sinensis
ENSCPOG00000000204	LRPPRC	77	44.184	ENSPMGG00000016597	lrpprc	96	44.184	Periophthalmus_magnuspinnatus
ENSCPOG00000000204	LRPPRC	99	43.353	ENSPMAG00000002147	lrpprc	92	43.353	Petromyzon_marinus
ENSCPOG00000000204	LRPPRC	99	49.464	ENSPFOG00000011227	lrpprc	87	49.423	Poecilia_formosa
ENSCPOG00000000204	LRPPRC	99	49.217	ENSPLAG00000004018	lrpprc	85	49.217	Poecilia_latipinna
ENSCPOG00000000204	LRPPRC	99	49.547	ENSPMEG00000016425	lrpprc	85	49.547	Poecilia_mexicana
ENSCPOG00000000204	LRPPRC	99	49.293	ENSPREG00000003662	lrpprc	86	49.261	Poecilia_reticulata
ENSCPOG00000000204	LRPPRC	67	77.833	ENSPPYG00000029532	-	100	77.833	Pongo_abelii
ENSCPOG00000000204	LRPPRC	81	74.611	ENSPCAG00000001430	LRPPRC	70	74.611	Procavia_capensis
ENSCPOG00000000204	LRPPRC	99	78.790	ENSPVAG00000002007	LRPPRC	87	78.790	Pteropus_vampyrus
ENSCPOG00000000204	LRPPRC	99	47.905	ENSPNYG00000000756	lrpprc	86	47.905	Pundamilia_nyererei
ENSCPOG00000000204	LRPPRC	100	52.389	ENSPNAG00000002895	lrpprc	86	52.389	Pygocentrus_nattereri
ENSCPOG00000000204	LRPPRC	100	77.778	ENSRNOG00000005877	Lrpprc	87	77.778	Rattus_norvegicus
ENSCPOG00000000204	LRPPRC	100	76.355	ENSRBIG00000031552	LRPPRC	87	76.355	Rhinopithecus_bieti
ENSCPOG00000000204	LRPPRC	100	77.815	ENSSBOG00000011807	LRPPRC	87	78.081	Saimiri_boliviensis_boliviensis
ENSCPOG00000000204	LRPPRC	99	66.197	ENSSHAG00000018725	LRPPRC	89	66.197	Sarcophilus_harrisii
ENSCPOG00000000204	LRPPRC	99	49.839	ENSSFOG00015001042	lrpprc	85	49.839	Scleropages_formosus
ENSCPOG00000000204	LRPPRC	99	50.164	ENSSDUG00000019062	lrpprc	85	50.164	Seriola_dumerili
ENSCPOG00000000204	LRPPRC	99	43.270	ENSSLDG00000023028	lrpprc	85	43.496	Seriola_lalandi_dorsalis
ENSCPOG00000000204	LRPPRC	95	69.790	ENSSARG00000000426	LRPPRC	94	69.790	Sorex_araneus
ENSCPOG00000000204	LRPPRC	99	46.613	ENSSPAG00000000162	lrpprc	86	46.613	Stegastes_partitus
ENSCPOG00000000204	LRPPRC	99	80.747	ENSSSCG00000008452	LRPPRC	86	80.747	Sus_scrofa
ENSCPOG00000000204	LRPPRC	100	54.088	ENSTGUG00000003759	LRPPRC	92	54.088	Taeniopygia_guttata
ENSCPOG00000000204	LRPPRC	89	50.318	ENSTRUG00000008409	lrpprc	81	50.317	Takifugu_rubripes
ENSCPOG00000000204	LRPPRC	99	48.978	ENSTNIG00000007470	lrpprc	90	48.978	Tetraodon_nigroviridis
ENSCPOG00000000204	LRPPRC	99	77.925	ENSTTRG00000006403	LRPPRC	86	77.925	Tursiops_truncatus
ENSCPOG00000000204	LRPPRC	99	74.357	ENSVPAG00000008993	LRPPRC	90	74.357	Vicugna_pacos
ENSCPOG00000000204	LRPPRC	99	58.964	ENSXETG00000009296	lrpprc	87	59.622	Xenopus_tropicalis
ENSCPOG00000000204	LRPPRC	99	46.455	ENSXCOG00000013343	lrpprc	85	45.220	Xiphophorus_couchianus
ENSCPOG00000000204	LRPPRC	99	50.082	ENSXMAG00000018108	lrpprc	86	50.082	Xiphophorus_maculatus