EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000000218 (Gene tree)
Gene ID: 100730467
Gene Symbol: SRP72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 29932 bases
Position: chrDS562879.1:26866605-26896536
Accession: 100730467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000191	SRP72	PF08492.12	3.3e-22	1	1
ENSCPOP00000021308	SRP72	PF08492.12	3.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000000221	SRP72-202	1833	-	ENSCPOP00000000191	610 (aa)	-	H0UTF8
ENSCPOT00000046937	SRP72-201	3967	XM_003471678	ENSCPOP00000021308	671 (aa)	XP_003471726	A0A286X7B1

Gene Model

Click here to download ENSCPOG00000000218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000000218	SRP72	100	98.361	ENSG00000174780	SRP72	100	98.361	Homo_sapiens
ENSCPOG00000000218	SRP72	99	76.480	ENSAPOG00000019438	srp72	97	76.351	Acanthochromis_polyacanthus
ENSCPOG00000000218	SRP72	100	97.615	ENSAMEG00000008469	SRP72	99	97.615	Ailuropoda_melanoleuca
ENSCPOG00000000218	SRP72	99	76.269	ENSACIG00000000488	srp72	97	76.147	Amphilophus_citrinellus
ENSCPOG00000000218	SRP72	100	77.198	ENSAOCG00000011256	srp72	98	77.099	Amphiprion_ocellaris
ENSCPOG00000000218	SRP72	100	76.900	ENSAPEG00000001512	srp72	98	76.794	Amphiprion_percula
ENSCPOG00000000218	SRP72	99	72.862	ENSATEG00000006781	srp72	99	77.850	Anabas_testudineus
ENSCPOG00000000218	SRP72	98	85.000	ENSAPLG00000008751	SRP72	96	85.248	Anas_platyrhynchos
ENSCPOG00000000218	SRP72	96	86.090	ENSACAG00000002381	SRP72	96	85.496	Anolis_carolinensis
ENSCPOG00000000218	SRP72	100	96.721	ENSANAG00000020836	-	100	96.721	Aotus_nancymaae
ENSCPOG00000000218	SRP72	99	76.946	ENSACLG00000014617	srp72	97	76.840	Astatotilapia_calliptera
ENSCPOG00000000218	SRP72	97	77.064	ENSAMXG00000004011	srp72	97	77.182	Astyanax_mexicanus
ENSCPOG00000000218	SRP72	100	97.019	ENSBTAG00000010593	SRP72	100	97.019	Bos_taurus
ENSCPOG00000000218	SRP72	100	97.236	ENSCJAG00000017998	SRP72	100	97.236	Callithrix_jacchus
ENSCPOG00000000218	SRP72	100	98.063	ENSCAFG00000002244	SRP72	100	98.063	Canis_familiaris
ENSCPOG00000000218	SRP72	100	97.869	ENSCAFG00020027338	SRP72	100	97.869	Canis_lupus_dingo
ENSCPOG00000000218	SRP72	99	96.985	ENSCHIG00000021465	SRP72	98	94.521	Capra_hircus
ENSCPOG00000000218	SRP72	99	97.904	ENSTSYG00000010571	-	99	97.904	Carlito_syrichta
ENSCPOG00000000218	SRP72	81	92.683	ENSCAPG00000016668	SRP72	93	92.683	Cavia_aperea
ENSCPOG00000000218	SRP72	98	94.809	ENSCCAG00000030830	-	98	94.809	Cebus_capucinus
ENSCPOG00000000218	SRP72	95	96.708	ENSCCAG00000030683	-	95	96.708	Cebus_capucinus
ENSCPOG00000000218	SRP72	100	98.212	ENSCATG00000008072	SRP72	100	98.212	Cercocebus_atys
ENSCPOG00000000218	SRP72	97	78.221	ENSCATG00000045359	-	95	78.120	Cercocebus_atys
ENSCPOG00000000218	SRP72	100	98.525	ENSCLAG00000003571	SRP72	100	98.525	Chinchilla_lanigera
ENSCPOG00000000218	SRP72	98	92.214	ENSCSAG00000005079	SRP72	98	92.214	Chlorocebus_sabaeus
ENSCPOG00000000218	SRP72	90	96.610	ENSCHOG00000013240	SRP72	90	96.610	Choloepus_hoffmanni
ENSCPOG00000000218	SRP72	96	87.714	ENSCPBG00000015015	SRP72	98	86.890	Chrysemys_picta_bellii
ENSCPOG00000000218	SRP72	94	41.033	ENSCING00000002417	-	95	41.337	Ciona_intestinalis
ENSCPOG00000000218	SRP72	94	41.437	ENSCSAVG00000011288	-	99	40.360	Ciona_savignyi
ENSCPOG00000000218	SRP72	100	98.212	ENSCANG00000041709	SRP72	100	98.212	Colobus_angolensis_palliatus
ENSCPOG00000000218	SRP72	92	78.486	ENSCANG00000037920	-	98	80.932	Colobus_angolensis_palliatus
ENSCPOG00000000218	SRP72	100	97.019	ENSCGRG00001013548	Srp72	100	97.019	Cricetulus_griseus_chok1gshd
ENSCPOG00000000218	SRP72	94	97.161	ENSCGRG00000003013	Srp72	99	97.161	Cricetulus_griseus_crigri
ENSCPOG00000000218	SRP72	99	77.246	ENSCSEG00000003616	srp72	97	77.301	Cynoglossus_semilaevis
ENSCPOG00000000218	SRP72	91	77.997	ENSCVAG00000001520	srp72	99	77.997	Cyprinodon_variegatus
ENSCPOG00000000218	SRP72	85	77.018	ENSDARG00000014139	srp72	97	77.123	Danio_rerio
ENSCPOG00000000218	SRP72	98	91.781	ENSDNOG00000039012	SRP72	81	92.085	Dasypus_novemcinctus
ENSCPOG00000000218	SRP72	99	96.567	ENSDORG00000000171	Srp72	99	96.567	Dipodomys_ordii
ENSCPOG00000000218	SRP72	92	40.865	FBgn0038810	Srp72	94	40.865	Drosophila_melanogaster
ENSCPOG00000000218	SRP72	96	96.118	ENSETEG00000005191	SRP72	98	96.037	Echinops_telfairi
ENSCPOG00000000218	SRP72	73	61.789	ENSEBUG00000003696	srp72	96	62.041	Eptatretus_burgeri
ENSCPOG00000000218	SRP72	100	97.765	ENSEASG00005017747	SRP72	100	97.765	Equus_asinus_asinus
ENSCPOG00000000218	SRP72	100	97.615	ENSECAG00000006920	SRP72	100	97.615	Equus_caballus
ENSCPOG00000000218	SRP72	99	76.042	ENSELUG00000022415	srp72	97	76.227	Esox_lucius
ENSCPOG00000000218	SRP72	100	97.321	ENSFCAG00000027600	SRP72	100	97.321	Felis_catus
ENSCPOG00000000218	SRP72	96	87.558	ENSFALG00000006713	SRP72	97	86.391	Ficedula_albicollis
ENSCPOG00000000218	SRP72	100	97.765	ENSFDAG00000002014	-	100	97.765	Fukomys_damarensis
ENSCPOG00000000218	SRP72	97	66.779	ENSFDAG00000009793	-	95	65.767	Fukomys_damarensis
ENSCPOG00000000218	SRP72	99	75.595	ENSFHEG00000017652	srp72	90	76.220	Fundulus_heteroclitus
ENSCPOG00000000218	SRP72	97	73.344	ENSGMOG00000005986	srp72	96	73.652	Gadus_morhua
ENSCPOG00000000218	SRP72	96	87.539	ENSGALG00000011403	SRP72	98	86.890	Gallus_gallus
ENSCPOG00000000218	SRP72	99	76.831	ENSGAFG00000017762	srp72	97	77.006	Gambusia_affinis
ENSCPOG00000000218	SRP72	99	75.000	ENSGACG00000016749	srp72	97	75.762	Gasterosteus_aculeatus
ENSCPOG00000000218	SRP72	87	86.426	ENSGAGG00000024611	SRP72	96	87.219	Gopherus_agassizii
ENSCPOG00000000218	SRP72	100	98.063	ENSGGOG00000013234	-	100	98.063	Gorilla_gorilla
ENSCPOG00000000218	SRP72	99	77.096	ENSHBUG00000020723	srp72	97	76.994	Haplochromis_burtoni
ENSCPOG00000000218	SRP72	98	80.301	ENSHGLG00000010633	-	98	89.247	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	57	77.168	ENSHGLG00000003496	-	97	77.647	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	100	98.361	ENSHGLG00000009791	SRP72	100	98.361	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	98	92.214	ENSHGLG00000005029	-	98	91.756	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	86	93.450	ENSHGLG00000003950	-	97	93.450	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	97	74.351	ENSHGLG00000018597	-	97	74.695	Heterocephalus_glaber_female
ENSCPOG00000000218	SRP72	100	98.361	ENSHGLG00100009021	SRP72	100	98.361	Heterocephalus_glaber_male
ENSCPOG00000000218	SRP72	91	86.893	ENSHGLG00100009346	-	97	86.893	Heterocephalus_glaber_male
ENSCPOG00000000218	SRP72	86	93.013	ENSHGLG00100017133	-	97	93.013	Heterocephalus_glaber_male
ENSCPOG00000000218	SRP72	98	92.214	ENSHGLG00100011236	-	98	91.756	Heterocephalus_glaber_male
ENSCPOG00000000218	SRP72	99	77.211	ENSHCOG00000013760	srp72	97	77.266	Hippocampus_comes
ENSCPOG00000000218	SRP72	99	76.912	ENSIPUG00000000210	srp72	97	76.805	Ictalurus_punctatus
ENSCPOG00000000218	SRP72	100	98.808	ENSSTOG00000007305	SRP72	100	98.808	Ictidomys_tridecemlineatus
ENSCPOG00000000218	SRP72	100	96.137	ENSJJAG00000018324	Srp72	100	96.465	Jaculus_jaculus
ENSCPOG00000000218	SRP72	99	75.934	ENSKMAG00000003776	srp72	97	76.037	Kryptolebias_marmoratus
ENSCPOG00000000218	SRP72	97	78.834	ENSLOCG00000002628	srp72	97	78.955	Lepisosteus_oculatus
ENSCPOG00000000218	SRP72	100	97.168	ENSLAFG00000018307	SRP72	100	97.168	Loxodonta_africana
ENSCPOG00000000218	SRP72	100	98.063	ENSMFAG00000031065	SRP72	100	98.063	Macaca_fascicularis
ENSCPOG00000000218	SRP72	98	79.148	ENSMFAG00000037164	-	97	79.598	Macaca_fascicularis
ENSCPOG00000000218	SRP72	94	71.815	ENSMMUG00000021262	-	95	71.520	Macaca_mulatta
ENSCPOG00000000218	SRP72	100	97.869	ENSMMUG00000016368	SRP72	100	97.869	Macaca_mulatta
ENSCPOG00000000218	SRP72	100	98.063	ENSMNEG00000038065	-	100	98.063	Macaca_nemestrina
ENSCPOG00000000218	SRP72	95	96.552	ENSMLEG00000030140	-	95	96.552	Mandrillus_leucophaeus
ENSCPOG00000000218	SRP72	99	76.453	ENSMAMG00000014989	srp72	87	76.336	Mastacembelus_armatus
ENSCPOG00000000218	SRP72	99	79.345	ENSMZEG00005003325	srp72	97	76.994	Maylandia_zebra
ENSCPOG00000000218	SRP72	95	83.622	ENSMGAG00000008567	SRP72	97	87.389	Meleagris_gallopavo
ENSCPOG00000000218	SRP72	100	97.321	ENSMAUG00000001237	Srp72	100	97.321	Mesocricetus_auratus
ENSCPOG00000000218	SRP72	95	96.395	ENSMICG00000008507	-	95	96.395	Microcebus_murinus
ENSCPOG00000000218	SRP72	100	96.885	ENSMOCG00000020309	Srp72	100	96.885	Microtus_ochrogaster
ENSCPOG00000000218	SRP72	99	74.850	ENSMMOG00000002627	srp72	97	75.307	Mola_mola
ENSCPOG00000000218	SRP72	95	88.119	ENSMODG00000020697	SRP72	98	86.565	Monodelphis_domestica
ENSCPOG00000000218	SRP72	99	76.347	ENSMALG00000003747	srp72	97	76.401	Monopterus_albus
ENSCPOG00000000218	SRP72	100	96.066	MGP_CAROLIEiJ_G0027323	Srp72	98	96.031	Mus_caroli
ENSCPOG00000000218	SRP72	100	96.066	ENSMUSG00000036323	Srp72	98	96.031	Mus_musculus
ENSCPOG00000000218	SRP72	100	96.078	MGP_PahariEiJ_G0017103	Srp72	100	96.078	Mus_pahari
ENSCPOG00000000218	SRP72	100	96.066	MGP_SPRETEiJ_G0028317	Srp72	98	96.031	Mus_spretus
ENSCPOG00000000218	SRP72	100	97.168	ENSMPUG00000004828	SRP72	100	97.168	Mustela_putorius_furo
ENSCPOG00000000218	SRP72	100	96.000	ENSMLUG00000007344	SRP72	100	96.000	Myotis_lucifugus
ENSCPOG00000000218	SRP72	100	96.423	ENSNGAG00000012595	Srp72	100	96.482	Nannospalax_galili
ENSCPOG00000000218	SRP72	99	73.653	ENSNBRG00000014492	srp72	97	73.006	Neolamprologus_brichardi
ENSCPOG00000000218	SRP72	100	91.952	ENSNLEG00000008806	-	100	91.952	Nomascus_leucogenys
ENSCPOG00000000218	SRP72	98	79.635	ENSMEUG00000005164	SRP72	98	78.963	Notamacropus_eugenii
ENSCPOG00000000218	SRP72	96	95.171	ENSOPRG00000012521	SRP72	97	95.107	Ochotona_princeps
ENSCPOG00000000218	SRP72	100	95.536	ENSODEG00000012214	SRP72	100	95.536	Octodon_degus
ENSCPOG00000000218	SRP72	99	76.900	ENSONIG00000001446	srp72	97	76.794	Oreochromis_niloticus
ENSCPOG00000000218	SRP72	96	71.560	ENSOANG00000008562	SRP72	97	71.407	Ornithorhynchus_anatinus
ENSCPOG00000000218	SRP72	100	97.317	ENSOCUG00000012226	SRP72	100	97.317	Oryctolagus_cuniculus
ENSCPOG00000000218	SRP72	99	75.253	ENSORLG00000020418	srp72	97	74.654	Oryzias_latipes
ENSCPOG00000000218	SRP72	99	73.313	ENSORLG00020009138	srp72	96	73.272	Oryzias_latipes_hni
ENSCPOG00000000218	SRP72	99	74.747	ENSORLG00015018251	srp72	97	74.040	Oryzias_latipes_hsok
ENSCPOG00000000218	SRP72	99	73.913	ENSOMEG00000022008	srp72	97	74.654	Oryzias_melastigma
ENSCPOG00000000218	SRP72	100	97.019	ENSOGAG00000003578	SRP72	100	97.019	Otolemur_garnettii
ENSCPOG00000000218	SRP72	100	97.317	ENSOARG00000004329	SRP72	100	97.317	Ovis_aries
ENSCPOG00000000218	SRP72	99	70.091	ENSPPAG00000011428	-	95	71.101	Pan_paniscus
ENSCPOG00000000218	SRP72	100	98.361	ENSPPAG00000042265	SRP72	100	98.374	Pan_paniscus
ENSCPOG00000000218	SRP72	80	77.799	ENSPPAG00000032490	-	91	76.852	Pan_paniscus
ENSCPOG00000000218	SRP72	100	97.466	ENSPPRG00000015991	SRP72	100	97.466	Panthera_pardus
ENSCPOG00000000218	SRP72	100	97.466	ENSPTIG00000018786	SRP72	100	97.466	Panthera_tigris_altaica
ENSCPOG00000000218	SRP72	100	98.361	ENSPTRG00000048466	-	100	98.361	Pan_troglodytes
ENSCPOG00000000218	SRP72	99	72.247	ENSPTRG00000048100	-	95	73.282	Pan_troglodytes
ENSCPOG00000000218	SRP72	80	77.612	ENSPTRG00000043609	-	92	75.899	Pan_troglodytes
ENSCPOG00000000218	SRP72	100	98.212	ENSPANG00000005495	SRP72	100	98.212	Papio_anubis
ENSCPOG00000000218	SRP72	94	77.690	ENSPANG00000030230	-	97	77.990	Papio_anubis
ENSCPOG00000000218	SRP72	93	87.700	ENSPSIG00000003003	SRP72	98	87.700	Pelodiscus_sinensis
ENSCPOG00000000218	SRP72	100	95.994	ENSPEMG00000012828	-	100	95.994	Peromyscus_maniculatus_bairdii
ENSCPOG00000000218	SRP72	96	91.022	ENSPCIG00000000732	SRP72	97	90.520	Phascolarctos_cinereus
ENSCPOG00000000218	SRP72	99	76.981	ENSPFOG00000003480	srp72	97	77.160	Poecilia_formosa
ENSCPOG00000000218	SRP72	99	76.981	ENSPLAG00000020122	srp72	97	77.160	Poecilia_latipinna
ENSCPOG00000000218	SRP72	99	76.682	ENSPMEG00000019988	srp72	97	76.852	Poecilia_mexicana
ENSCPOG00000000218	SRP72	100	75.817	ENSPREG00000006218	srp72	97	76.852	Poecilia_reticulata
ENSCPOG00000000218	SRP72	62	81.414	ENSPPYG00000009152	-	95	80.105	Pongo_abelii
ENSCPOG00000000218	SRP72	100	98.361	ENSPPYG00000014752	-	78	98.361	Pongo_abelii
ENSCPOG00000000218	SRP72	98	95.725	ENSPVAG00000005590	SRP72	98	95.725	Pteropus_vampyrus
ENSCPOG00000000218	SRP72	99	77.395	ENSPNYG00000001916	srp72	97	77.301	Pundamilia_nyererei
ENSCPOG00000000218	SRP72	99	76.831	ENSPNAG00000022424	srp72	97	76.723	Pygocentrus_nattereri
ENSCPOG00000000218	SRP72	100	93.890	ENSRNOG00000002100	LOC108348180	98	94.504	Rattus_norvegicus
ENSCPOG00000000218	SRP72	100	96.985	ENSRBIG00000042069	SRP72	100	96.985	Rhinopithecus_bieti
ENSCPOG00000000218	SRP72	99	75.602	ENSRBIG00000029328	-	98	75.215	Rhinopithecus_bieti
ENSCPOG00000000218	SRP72	100	98.212	ENSRROG00000035704	SRP72	100	98.212	Rhinopithecus_roxellana
ENSCPOG00000000218	SRP72	95	89.639	ENSSHAG00000000614	SRP72	98	87.690	Sarcophilus_harrisii
ENSCPOG00000000218	SRP72	99	78.561	ENSSFOG00015002026	srp72	97	78.495	Scleropages_formosus
ENSCPOG00000000218	SRP72	99	76.250	ENSSMAG00000007639	srp72	97	75.267	Scophthalmus_maximus
ENSCPOG00000000218	SRP72	99	76.716	ENSSDUG00000007345	srp72	96	77.523	Seriola_dumerili
ENSCPOG00000000218	SRP72	99	76.602	ENSSLDG00000021819	srp72	97	76.923	Seriola_lalandi_dorsalis
ENSCPOG00000000218	SRP72	82	92.895	ENSSARG00000005804	SRP72	74	92.895	Sorex_araneus
ENSCPOG00000000218	SRP72	96	86.916	ENSSPUG00000009740	SRP72	97	86.086	Sphenodon_punctatus
ENSCPOG00000000218	SRP72	99	76.647	ENSSPAG00000011565	srp72	97	77.454	Stegastes_partitus
ENSCPOG00000000218	SRP72	99	93.665	ENSSSCG00000008900	SRP72	98	93.750	Sus_scrofa
ENSCPOG00000000218	SRP72	96	87.422	ENSTGUG00000004767	SRP72	97	86.107	Taeniopygia_guttata
ENSCPOG00000000218	SRP72	99	75.862	ENSTRUG00000009831	srp72	97	75.883	Takifugu_rubripes
ENSCPOG00000000218	SRP72	99	77.198	ENSTNIG00000013073	srp72	97	77.099	Tetraodon_nigroviridis
ENSCPOG00000000218	SRP72	90	87.500	ENSTBEG00000007394	SRP72	90	85.593	Tupaia_belangeri
ENSCPOG00000000218	SRP72	94	96.688	ENSTTRG00000010945	SRP72	100	96.688	Tursiops_truncatus
ENSCPOG00000000218	SRP72	66	97.500	ENSUAMG00000001701	SRP72	100	98.158	Ursus_americanus
ENSCPOG00000000218	SRP72	100	97.739	ENSUMAG00000008151	SRP72	100	97.739	Ursus_maritimus
ENSCPOG00000000218	SRP72	98	95.420	ENSVPAG00000000458	SRP72	98	95.420	Vicugna_pacos
ENSCPOG00000000218	SRP72	100	97.914	ENSVVUG00000006020	SRP72	100	97.914	Vulpes_vulpes
ENSCPOG00000000218	SRP72	95	79.435	ENSXETG00000010205	srp72	97	79.066	Xenopus_tropicalis
ENSCPOG00000000218	SRP72	99	76.233	ENSXMAG00000018000	srp72	97	76.498	Xiphophorus_maculatus