EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000000389 (Gene tree)
Gene ID: 100714312
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 53776 bases
Position: chrDS562874.1:16318139-16371914
Accession: 100714312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000340	zf-C2H2	PF00096.26	7.3e-16	1	2
ENSCPOP00000000340	zf-C2H2	PF00096.26	7.3e-16	2	2
ENSCPOP00000000340	zf-met	PF12874.7	6.1e-08	1	2
ENSCPOP00000000340	zf-met	PF12874.7	6.1e-08	2	2
ENSCPOP00000000340	zf-C2H2_jaz	PF12171.8	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000000392	PRDM10-202	3273	XM_013155402	ENSCPOP00000000340	1090 (aa)	-	H0UTT6
ENSCPOT00000036064	PRDM10-201	921	-	ENSCPOP00000028636	307 (aa)	-	A0A286XSY6

Gene Model

Click here to download ENSCPOG00000000389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000000389	PRDM10	51	35.417	ENSCPOG00000012883	PRDM5	76	38.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000000389	PRDM10	98	86.040	ENSG00000170325	PRDM10	99	81.504	Homo_sapiens
ENSCPOG00000000389	PRDM10	96	96.000	ENSAMEG00000002425	PRDM10	97	85.998	Ailuropoda_melanoleuca
ENSCPOG00000000389	PRDM10	97	79.051	ENSAPLG00000004858	PRDM10	93	79.051	Anas_platyrhynchos
ENSCPOG00000000389	PRDM10	98	81.001	ENSANAG00000022064	PRDM10	94	80.570	Aotus_nancymaae
ENSCPOG00000000389	PRDM10	98	85.601	ENSBTAG00000019001	PRDM10	99	82.791	Bos_taurus
ENSCPOG00000000389	PRDM10	98	86.323	ENSCJAG00000009235	PRDM10	94	86.125	Callithrix_jacchus
ENSCPOG00000000389	PRDM10	98	85.602	ENSCAFG00000010164	PRDM10	99	81.288	Canis_familiaris
ENSCPOG00000000389	PRDM10	98	85.813	ENSCAFG00020010152	PRDM10	98	84.884	Canis_lupus_dingo
ENSCPOG00000000389	PRDM10	98	85.601	ENSCHIG00000026530	PRDM10	99	79.563	Capra_hircus
ENSCPOG00000000389	PRDM10	98	86.931	ENSTSYG00000000544	PRDM10	94	87.030	Carlito_syrichta
ENSCPOG00000000389	PRDM10	100	95.875	ENSCAPG00000017296	PRDM10	100	95.875	Cavia_aperea
ENSCPOG00000000389	PRDM10	98	86.323	ENSCCAG00000024567	PRDM10	94	86.224	Cebus_capucinus
ENSCPOG00000000389	PRDM10	98	86.806	ENSCATG00000040031	PRDM10	94	86.806	Cercocebus_atys
ENSCPOG00000000389	PRDM10	98	89.009	ENSCLAG00000014605	PRDM10	99	89.009	Chinchilla_lanigera
ENSCPOG00000000389	PRDM10	98	86.905	ENSCSAG00000002202	PRDM10	94	87.302	Chlorocebus_sabaeus
ENSCPOG00000000389	PRDM10	97	82.716	ENSCPBG00000026880	PRDM10	88	82.716	Chrysemys_picta_bellii
ENSCPOG00000000389	PRDM10	98	86.521	ENSCANG00000032669	PRDM10	93	86.422	Colobus_angolensis_palliatus
ENSCPOG00000000389	PRDM10	98	86.083	ENSCGRG00001021647	Prdm10	99	84.541	Cricetulus_griseus_chok1gshd
ENSCPOG00000000389	PRDM10	98	86.083	ENSCGRG00000006562	Prdm10	99	84.541	Cricetulus_griseus_crigri
ENSCPOG00000000389	PRDM10	77	87.421	ENSDNOG00000001366	PRDM10	86	87.421	Dasypus_novemcinctus
ENSCPOG00000000389	PRDM10	98	78.888	ENSDORG00000014292	Prdm10	93	86.207	Dipodomys_ordii
ENSCPOG00000000389	PRDM10	98	86.074	ENSEASG00005022914	PRDM10	99	86.523	Equus_asinus_asinus
ENSCPOG00000000389	PRDM10	97	86.197	ENSECAG00000011499	PRDM10	99	85.355	Equus_caballus
ENSCPOG00000000389	PRDM10	97	86.395	ENSFCAG00000004111	PRDM10	90	86.395	Felis_catus
ENSCPOG00000000389	PRDM10	97	79.088	ENSFALG00000004873	PRDM10	89	79.088	Ficedula_albicollis
ENSCPOG00000000389	PRDM10	98	86.625	ENSFDAG00000017311	PRDM10	99	86.625	Fukomys_damarensis
ENSCPOG00000000389	PRDM10	97	82.716	ENSGALG00000033660	PRDM10	92	80.041	Gallus_gallus
ENSCPOG00000000389	PRDM10	98	61.585	ENSGACG00000012293	prdm10	99	57.205	Gasterosteus_aculeatus
ENSCPOG00000000389	PRDM10	97	80.247	ENSGAGG00000012523	PRDM10	91	77.690	Gopherus_agassizii
ENSCPOG00000000389	PRDM10	99	86.149	ENSGGOG00000015359	PRDM10	94	86.548	Gorilla_gorilla
ENSCPOG00000000389	PRDM10	98	87.982	ENSHGLG00000001106	PRDM10	99	87.982	Heterocephalus_glaber_female
ENSCPOG00000000389	PRDM10	98	87.982	ENSHGLG00100002350	PRDM10	99	87.982	Heterocephalus_glaber_male
ENSCPOG00000000389	PRDM10	98	86.620	ENSSTOG00000002015	PRDM10	99	77.034	Ictidomys_tridecemlineatus
ENSCPOG00000000389	PRDM10	79	75.478	ENSJJAG00000021493	Prdm10	89	75.232	Jaculus_jaculus
ENSCPOG00000000389	PRDM10	98	83.088	ENSLAFG00000031867	PRDM10	99	79.250	Loxodonta_africana
ENSCPOG00000000389	PRDM10	98	86.806	ENSMFAG00000031008	PRDM10	94	86.806	Macaca_fascicularis
ENSCPOG00000000389	PRDM10	98	86.806	ENSMMUG00000017555	PRDM10	94	86.806	Macaca_mulatta
ENSCPOG00000000389	PRDM10	98	86.706	ENSMNEG00000036493	PRDM10	94	86.706	Macaca_nemestrina
ENSCPOG00000000389	PRDM10	92	100.000	ENSMLEG00000042028	PRDM10	93	100.000	Mandrillus_leucophaeus
ENSCPOG00000000389	PRDM10	97	82.716	ENSMGAG00000001112	PRDM10	89	82.716	Meleagris_gallopavo
ENSCPOG00000000389	PRDM10	98	86.508	ENSMICG00000013888	PRDM10	99	76.930	Microcebus_murinus
ENSCPOG00000000389	PRDM10	98	86.037	ENSMOCG00000021853	Prdm10	100	85.339	Microtus_ochrogaster
ENSCPOG00000000389	PRDM10	79	78.009	ENSMODG00000004979	PRDM10	99	66.809	Monodelphis_domestica
ENSCPOG00000000389	PRDM10	98	86.359	ENSMUSG00000042496	Prdm10	99	84.609	Mus_musculus
ENSCPOG00000000389	PRDM10	98	86.436	MGP_SPRETEiJ_G0033061	-	98	85.344	Mus_spretus
ENSCPOG00000000389	PRDM10	99	85.700	ENSMPUG00000008711	PRDM10	99	76.074	Mustela_putorius_furo
ENSCPOG00000000389	PRDM10	98	84.554	ENSMLUG00000013051	PRDM10	99	74.937	Myotis_lucifugus
ENSCPOG00000000389	PRDM10	99	77.417	ENSNGAG00000000580	Prdm10	92	86.449	Nannospalax_galili
ENSCPOG00000000389	PRDM10	98	86.508	ENSNLEG00000007488	PRDM10	94	86.409	Nomascus_leucogenys
ENSCPOG00000000389	PRDM10	98	88.123	ENSODEG00000005309	PRDM10	99	88.123	Octodon_degus
ENSCPOG00000000389	PRDM10	97	74.902	ENSOANG00000000577	-	85	73.828	Ornithorhynchus_anatinus
ENSCPOG00000000389	PRDM10	97	85.586	ENSOCUG00000003736	PRDM10	92	85.586	Oryctolagus_cuniculus
ENSCPOG00000000389	PRDM10	98	86.166	ENSOGAG00000010723	PRDM10	94	86.166	Otolemur_garnettii
ENSCPOG00000000389	PRDM10	98	85.799	ENSOARG00000014507	PRDM10	99	75.956	Ovis_aries
ENSCPOG00000000389	PRDM10	99	86.051	ENSPPAG00000042881	PRDM10	94	86.449	Pan_paniscus
ENSCPOG00000000389	PRDM10	97	86.395	ENSPPRG00000007002	PRDM10	92	86.395	Panthera_pardus
ENSCPOG00000000389	PRDM10	97	86.296	ENSPTIG00000013331	PRDM10	92	86.296	Panthera_tigris_altaica
ENSCPOG00000000389	PRDM10	99	86.051	ENSPTRG00000004477	PRDM10	94	86.449	Pan_troglodytes
ENSCPOG00000000389	PRDM10	98	87.240	ENSPANG00000017470	PRDM10	94	87.240	Papio_anubis
ENSCPOG00000000389	PRDM10	98	86.686	ENSPEMG00000014985	Prdm10	99	85.907	Peromyscus_maniculatus_bairdii
ENSCPOG00000000389	PRDM10	98	86.436	ENSPPYG00000004061	PRDM10	94	86.535	Pongo_abelii
ENSCPOG00000000389	PRDM10	88	96.364	ENSPCAG00000014514	PRDM10	92	96.364	Procavia_capensis
ENSCPOG00000000389	PRDM10	98	80.655	ENSPCOG00000023406	PRDM10	99	72.300	Propithecus_coquereli
ENSCPOG00000000389	PRDM10	98	86.053	ENSPVAG00000012764	PRDM10	99	76.396	Pteropus_vampyrus
ENSCPOG00000000389	PRDM10	98	86.779	ENSRNOG00000007853	Prdm10	99	77.551	Rattus_norvegicus
ENSCPOG00000000389	PRDM10	98	86.535	ENSRBIG00000030924	PRDM10	94	86.634	Rhinopithecus_bieti
ENSCPOG00000000389	PRDM10	98	86.535	ENSRROG00000034334	PRDM10	94	86.634	Rhinopithecus_roxellana
ENSCPOG00000000389	PRDM10	98	86.238	ENSSBOG00000008773	PRDM10	94	86.337	Saimiri_boliviensis_boliviensis
ENSCPOG00000000389	PRDM10	97	80.493	ENSSHAG00000004503	PRDM10	93	81.182	Sarcophilus_harrisii
ENSCPOG00000000389	PRDM10	67	80.469	ENSSARG00000013953	-	63	80.662	Sorex_araneus
ENSCPOG00000000389	PRDM10	98	73.986	ENSSPUG00000001178	PRDM10	97	73.883	Sphenodon_punctatus
ENSCPOG00000000389	PRDM10	98	85.998	ENSSSCG00000015243	PRDM10	93	87.972	Sus_scrofa
ENSCPOG00000000389	PRDM10	97	79.150	ENSTGUG00000000530	PRDM10	93	79.150	Taeniopygia_guttata
ENSCPOG00000000389	PRDM10	92	97.464	ENSTBEG00000007221	PRDM10	83	97.464	Tupaia_belangeri
ENSCPOG00000000389	PRDM10	99	79.932	ENSTTRG00000009189	PRDM10	99	79.762	Tursiops_truncatus
ENSCPOG00000000389	PRDM10	87	93.506	ENSUAMG00000018832	PRDM10	95	86.800	Ursus_americanus
ENSCPOG00000000389	PRDM10	97	92.208	ENSUMAG00000003167	PRDM10	99	85.318	Ursus_maritimus
ENSCPOG00000000389	PRDM10	98	86.097	ENSVVUG00000019878	PRDM10	99	79.188	Vulpes_vulpes
ENSCPOG00000000389	PRDM10	98	66.667	ENSXETG00000032173	PRDM10	90	58.767	Xenopus_tropicalis